RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 AKAP12Q02952 1782 aa23.08■■□□□ 1.29
CAPN1-201ENST00000279247 XPCQ01831 940 aaPredicted RBP23.08■■□□□ 1.29
CAPN1-201ENST00000279247 PDE3AQ14432 1141 aa23.08■■□□□ 1.29
CAPN1-201ENST00000279247 AATKQ6ZMQ8 1374 aa23.08■■□□□ 1.29
CAPN1-201ENST00000279247 DIP2AQ14689 1571 aa23.07■■□□□ 1.28
CAPN1-201ENST00000279247 PTCH1Q13635 1447 aa23.07■■□□□ 1.28
CAPN1-201ENST00000279247 IGHDP01880 384 aa23.07■■□□□ 1.28
CAPN1-201ENST00000279247 AMPHP49418 695 aa23.07■■□□□ 1.28
CAPN1-201ENST00000279247 CENPQQ7L2Z9 268 aaPredicted RBP23.07■■□□□ 1.28
CAPN1-201ENST00000279247 LTV1Q96GA3 475 aaPredicted RBP23.07■■□□□ 1.28
CAPN1-201ENST00000279247 ABTB2Q8N961 1025 aa23.06■■□□□ 1.28
CAPN1-201ENST00000279247 CDK12Q9NYV4 1490 aaPredicted RBP23.06■■□□□ 1.28
CAPN1-201ENST00000279247 MAP3K19Q56UN5 1328 aa23.06■■□□□ 1.28
CAPN1-201ENST00000279247 KDM2BQ8NHM5 1336 aa23.06■■□□□ 1.28
CAPN1-201ENST00000279247 ESCO1Q5FWF5 840 aa23.05■■□□□ 1.28
CAPN1-201ENST00000279247 PDE4AP27815 886 aa23.04■■□□□ 1.28
CAPN1-201ENST00000279247 ZKSCAN2Q63HK3 967 aa23.03■■□□□ 1.28
CAPN1-201ENST00000279247 ORAI2Q96SN7 254 aa23.03■■□□□ 1.28
CAPN1-201ENST00000279247 XRN1Q8IZH2 1706 aaKnown RBP23.03■■□□□ 1.28
CAPN1-201ENST00000279247 NOB1Q9ULX3 412 aaKnown RBP23.03■■□□□ 1.28
CAPN1-201ENST00000279247 LMOD2Q6P5Q4 547 aa23.02■■□□□ 1.28
CAPN1-201ENST00000279247 TSPYL6Q8N831 410 aa23.02■■□□□ 1.28
CAPN1-201ENST00000279247 OVOS2A0A0J9YW53 1432 aa23.02■■□□□ 1.27
CAPN1-201ENST00000279247 OVOS2Q6IE36 1432 aa23.02■■□□□ 1.27
CAPN1-201ENST00000279247 MCM10Q7L590 875 aa23.01■■□□□ 1.27
CAPN1-201ENST00000279247 ITPRIPQ8IWB1 547 aa23.01■■□□□ 1.27
CAPN1-201ENST00000279247 PIK3R4Q99570 1358 aa23.01■■□□□ 1.27
CAPN1-201ENST00000279247 DZIP1LQ8IYY4 767 aaKnown RBP23■■□□□ 1.27
CAPN1-201ENST00000279247 TRIM27P14373 513 aa23■■□□□ 1.27
CAPN1-201ENST00000279247 ERICH6Q7L0X2 663 aa23■■□□□ 1.27
CAPN1-201ENST00000279247 PHF8Q9UPP1 1060 aa23■■□□□ 1.27
CAPN1-201ENST00000279247 MBIPQ9NS73 344 aa22.99■■□□□ 1.27
CAPN1-201ENST00000279247 CHD2O14647 1828 aaKnown RBP22.99■■□□□ 1.27
CAPN1-201ENST00000279247 PCDHB15Q9Y5E8 787 aa22.99■■□□□ 1.27
CAPN1-201ENST00000279247 TOPAZ1Q8N9V7 1692 aa22.99■■□□□ 1.27
CAPN1-201ENST00000279247 IL16Q14005 1332 aa22.98■■□□□ 1.27
CAPN1-201ENST00000279247 TTC21AQ8NDW8 1320 aa22.98■■□□□ 1.27
CAPN1-201ENST00000279247 FOXO3O43524 673 aa22.98■■□□□ 1.27
CAPN1-201ENST00000279247 NCBP3Q53F19 620 aaKnown RBP22.98■■□□□ 1.27
CAPN1-201ENST00000279247 DDX17Q92841 729 aaKnown RBP22.98■■□□□ 1.27
CAPN1-201ENST00000279247 PSME1Q06323 249 aa22.97■■□□□ 1.27
CAPN1-201ENST00000279247 ANP32AP39687 249 aaKnown RBP22.96■■□□□ 1.27
CAPN1-201ENST00000279247 KRT24Q2M2I5 525 aa22.95■■□□□ 1.27
CAPN1-201ENST00000279247 MIS18AQ9NYP9 233 aa22.95■■□□□ 1.26
CAPN1-201ENST00000279247 NRKQ7Z2Y5 1582 aa22.95■■□□□ 1.26
CAPN1-201ENST00000279247 GNAI1P63096 354 aa22.95■■□□□ 1.26
CAPN1-201ENST00000279247 MVPQ14764 893 aaKnown RBP22.95■■□□□ 1.26
CAPN1-201ENST00000279247 SSH2Q76I76 1423 aa22.94■■□□□ 1.26
CAPN1-201ENST00000279247 ATF7IPQ6VMQ6 1270 aa22.94■■□□□ 1.26
CAPN1-201ENST00000279247 BACH2Q9BYV9 841 aa22.94■■□□□ 1.26
CAPN1-201ENST00000279247 NALCNQ8IZF0 1738 aa22.93■■□□□ 1.26
CAPN1-201ENST00000279247 TMEM57Q8N5G2 664 aa22.93■■□□□ 1.26
CAPN1-201ENST00000279247 USHBP1Q8N6Y0 703 aa22.93■■□□□ 1.26
CAPN1-201ENST00000279247 C8orf58Q8NAV2 365 aa22.93■■□□□ 1.26
CAPN1-201ENST00000279247 LMTK3Q96Q04 1460 aa22.93■■□□□ 1.26
CAPN1-201ENST00000279247 EYA1Q99502 592 aa22.92■■□□□ 1.26
CAPN1-201ENST00000279247 ZNF335Q9H4Z2 1342 aaPredicted RBP22.92■■□□□ 1.26
CAPN1-201ENST00000279247 CT47B1P0C2W7 299 aaPredicted RBP22.92■■□□□ 1.26
CAPN1-201ENST00000279247 CALD1Q05682 793 aaKnown RBP22.92■■□□□ 1.26
CAPN1-201ENST00000279247 LMOD3Q0VAK6 560 aa22.92■■□□□ 1.26
CAPN1-201ENST00000279247 TMEM94Q12767 1356 aa22.92■■□□□ 1.26
CAPN1-201ENST00000279247 USP31Q70CQ4 1352 aa22.91■■□□□ 1.26
CAPN1-201ENST00000279247 PEAK1Q9H792 1746 aa22.91■■□□□ 1.26
CAPN1-201ENST00000279247 TWISTNBQ3B726 338 aaPredicted RBP22.91■■□□□ 1.26
CAPN1-201ENST00000279247 MS4A1P11836 297 aa22.91■■□□□ 1.26
CAPN1-201ENST00000279247 IFT57Q9NWB7 429 aa22.91■■□□□ 1.26
CAPN1-201ENST00000279247 VAMP4O75379 141 aa22.9■■□□□ 1.26
CAPN1-201ENST00000279247 FLT4P35916 1363 aa22.9■■□□□ 1.26
CAPN1-201ENST00000279247 BCL11AQ9H165 835 aa22.9■■□□□ 1.26
CAPN1-201ENST00000279247 DLG5Q8TDM6 1919 aa22.89■■□□□ 1.26
CAPN1-201ENST00000279247 CFAP44Q96MT7 982 aa22.89■■□□□ 1.26
CAPN1-201ENST00000279247 ADGRL3Q9HAR2 1447 aa22.89■■□□□ 1.25
CAPN1-201ENST00000279247 MTHFSDQ2M296 383 aaKnown RBP22.89■■□□□ 1.25
CAPN1-201ENST00000279247 SBNO1A3KN83 1393 aa22.88■■□□□ 1.25
CAPN1-201ENST00000279247 HOXC9P31274 260 aa22.87■■□□□ 1.25
CAPN1-201ENST00000279247 IPO8O15397 1037 aaKnown RBP22.87■■□□□ 1.25
CAPN1-201ENST00000279247 KIF16BQ96L93 1317 aa22.86■■□□□ 1.25
CAPN1-201ENST00000279247 ANKARQ7Z5J8 1434 aa22.86■■□□□ 1.25
CAPN1-201ENST00000279247 PIK3C2AO00443 1686 aa22.86■■□□□ 1.25
CAPN1-201ENST00000279247 RTF1Q92541 710 aaKnown RBP22.86■■□□□ 1.25
CAPN1-201ENST00000279247 C19orf44Q9H6X5 657 aa22.86■■□□□ 1.25
CAPN1-201ENST00000279247 ZNF853P0CG23 659 aa22.85■■□□□ 1.25
CAPN1-201ENST00000279247 ATF3P18847 181 aa22.84■■□□□ 1.25
CAPN1-201ENST00000279247 ANP32EQ9BTT0 268 aa22.84■■□□□ 1.25
CAPN1-201ENST00000279247 C1orf115Q9H7X2 142 aa22.84■■□□□ 1.25
CAPN1-201ENST00000279247 STRCP1A6NGW2 1772 aa22.83■■□□□ 1.25
CAPN1-201ENST00000279247 FMN2Q9NZ56 1722 aa22.83■■□□□ 1.25
CAPN1-201ENST00000279247 DDX19BQ9UMR2 479 aa22.83■■□□□ 1.24
CAPN1-201ENST00000279247 ALDH1L2Q3SY69 923 aa22.82■■□□□ 1.24
CAPN1-201ENST00000279247 RWDD1Q9H446 243 aaPredicted RBP22.82■■□□□ 1.24
CAPN1-201ENST00000279247 MRPL50Q8N5N7 158 aaKnown RBP22.82■■□□□ 1.24
CAPN1-201ENST00000279247 PDZRN3Q9UPQ7 1066 aa22.81■■□□□ 1.24
CAPN1-201ENST00000279247 IPO9Q96P70 1041 aaKnown RBP22.8■■□□□ 1.24
CAPN1-201ENST00000279247 FAM161AQ3B820 660 aa22.79■■□□□ 1.24
CAPN1-201ENST00000279247 NECTIN2Q92692 538 aa22.79■■□□□ 1.24
CAPN1-201ENST00000279247 NOP58Q9Y2X3 529 aaKnown RBP22.79■■□□□ 1.24
CAPN1-201ENST00000279247 TSPYL4Q9UJ04 414 aa22.78■■□□□ 1.24
CAPN1-201ENST00000279247 C8orf34Q49A92 452 aa22.78■■□□□ 1.24
CAPN1-201ENST00000279247 LRRC59Q96AG4 307 aaKnown RBP22.78■■□□□ 1.24
CAPN1-201ENST00000279247 STRCQ7RTU9 1775 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms