RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 HSP90AB2PQ58FF8 381 aa19.1■□□□□ 0.65
TRIM23-202ENST00000274327 RRP7AQ9Y3A4 280 aaKnown RBP19.1■□□□□ 0.65
TRIM23-202ENST00000274327 MAPK8IP3Q9UPT6 1336 aa19.1■□□□□ 0.65
TRIM23-202ENST00000274327 XPCQ01831 940 aaPredicted RBP19.09■□□□□ 0.65
TRIM23-202ENST00000274327 TMPOP42166 694 aaKnown RBP19.09■□□□□ 0.65
TRIM23-202ENST00000274327 RTL1A6NKG5 1358 aa19.08■□□□□ 0.65
TRIM23-202ENST00000274327 PRKAR2BP31323 418 aa19.08■□□□□ 0.64
TRIM23-202ENST00000274327 WDR63Q8IWG1 891 aa19.08■□□□□ 0.64
TRIM23-202ENST00000274327 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.64
TRIM23-202ENST00000274327 E9PSI1 815 aa19.07■□□□□ 0.64
TRIM23-202ENST00000274327 NEUROD2Q15784 382 aa19.07■□□□□ 0.64
TRIM23-202ENST00000274327 USP19O94966 1318 aa19.07■□□□□ 0.64
TRIM23-202ENST00000274327 HMOX1P09601 288 aa19.07■□□□□ 0.64
TRIM23-202ENST00000274327 AMPHP49418 695 aa19.07■□□□□ 0.64
TRIM23-202ENST00000274327 KCNH5Q8NCM2 988 aa19.07■□□□□ 0.64
TRIM23-202ENST00000274327 NPHP3Q7Z494 1330 aa19.07■□□□□ 0.64
TRIM23-202ENST00000274327 PXDNQ92626 1479 aa19.07■□□□□ 0.64
TRIM23-202ENST00000274327 HOXC9P31274 260 aa19.06■□□□□ 0.64
TRIM23-202ENST00000274327 ARHGEF10O15013 1369 aa19.05■□□□□ 0.64
TRIM23-202ENST00000274327 RCAN3Q9UKA8 241 aa19.05■□□□□ 0.64
TRIM23-202ENST00000274327 TRIM35Q9UPQ4 493 aa19.04■□□□□ 0.64
TRIM23-202ENST00000274327 BRINP3Q76B58 766 aa19.04■□□□□ 0.64
TRIM23-202ENST00000274327 DLG5Q8TDM6 1919 aa19.03■□□□□ 0.64
TRIM23-202ENST00000274327 MED1Q15648 1581 aaPredicted RBP19.03■□□□□ 0.64
TRIM23-202ENST00000274327 NEFMP07197 916 aa19.02■□□□□ 0.64
TRIM23-202ENST00000274327 DDX17Q92841 729 aaKnown RBP19.02■□□□□ 0.64
TRIM23-202ENST00000274327 PHACTR3Q96KR7 559 aa19.02■□□□□ 0.64
TRIM23-202ENST00000274327 TNS3Q68CZ2 1445 aa19.02■□□□□ 0.64
TRIM23-202ENST00000274327 RIPK4P57078 832 aa19.02■□□□□ 0.63
TRIM23-202ENST00000274327 NFE2L2Q16236 605 aa19.02■□□□□ 0.63
TRIM23-202ENST00000274327 IP6K1Q92551 441 aa19.02■□□□□ 0.63
TRIM23-202ENST00000274327 SLAIN2Q9P270 581 aa19.02■□□□□ 0.63
TRIM23-202ENST00000274327 CRYBG1Q9Y4K1 1723 aa19.01■□□□□ 0.63
TRIM23-202ENST00000274327 GCP02774 474 aa19.01■□□□□ 0.63
TRIM23-202ENST00000274327 ERICH6BQ5W0A0 696 aa19.01■□□□□ 0.63
TRIM23-202ENST00000274327 SULT6B1Q6IMI4 303 aa19.01■□□□□ 0.63
TRIM23-202ENST00000274327 AEBP1Q8IUX7 1158 aa19.01■□□□□ 0.63
TRIM23-202ENST00000274327 KDRP35968 1356 aa19.01■□□□□ 0.63
TRIM23-202ENST00000274327 IGSF1Q8N6C5 1336 aa19.01■□□□□ 0.63
TRIM23-202ENST00000274327 LTBP4Q8N2S1 1624 aa19■□□□□ 0.63
TRIM23-202ENST00000274327 IRX6P78412 446 aaPredicted RBP18.99■□□□□ 0.63
TRIM23-202ENST00000274327 LMOD2Q6P5Q4 547 aa18.99■□□□□ 0.63
TRIM23-202ENST00000274327 ARHGEF25Q86VW2 580 aa18.99■□□□□ 0.63
TRIM23-202ENST00000274327 EYA1Q99502 592 aa18.99■□□□□ 0.63
TRIM23-202ENST00000274327 IL16Q14005 1332 aa18.98■□□□□ 0.63
TRIM23-202ENST00000274327 SPATA31A3Q5VYP0 1347 aa18.98■□□□□ 0.63
TRIM23-202ENST00000274327 NHSL1Q5SYE7 1610 aa18.98■□□□□ 0.63
TRIM23-202ENST00000274327 RRP1P56182 461 aaKnown RBP18.98■□□□□ 0.63
TRIM23-202ENST00000274327 SOS2Q07890 1332 aaPredicted RBP18.96■□□□□ 0.63
TRIM23-202ENST00000274327 MYH16Q9H6N6 1097 aa18.95■□□□□ 0.62
TRIM23-202ENST00000274327 RGPD2P0DJD1 1756 aa18.93■□□□□ 0.62
TRIM23-202ENST00000274327 COL18A1P39060 1754 aa18.93■□□□□ 0.62
TRIM23-202ENST00000274327 LMOD3Q0VAK6 560 aa18.93■□□□□ 0.62
TRIM23-202ENST00000274327 RGPD5Q99666 1765 aa18.92■□□□□ 0.62
TRIM23-202ENST00000274327 CAMTA1Q9Y6Y1 1673 aa18.92■□□□□ 0.62
TRIM23-202ENST00000274327 ABCC6O95255 1503 aa18.92■□□□□ 0.62
TRIM23-202ENST00000274327 LTV1Q96GA3 475 aaPredicted RBP18.91■□□□□ 0.62
TRIM23-202ENST00000274327 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
TRIM23-202ENST00000274327 FANCIQ9NVI1 1328 aa18.9■□□□□ 0.62
TRIM23-202ENST00000274327 ZBTB7CA1YPR0 619 aa18.89■□□□□ 0.61
TRIM23-202ENST00000274327 CALD1Q05682 793 aaKnown RBP18.89■□□□□ 0.61
TRIM23-202ENST00000274327 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
TRIM23-202ENST00000274327 ABCA3Q99758 1704 aa18.88■□□□□ 0.61
TRIM23-202ENST00000274327 LMO7Q8WWI1 1683 aa18.88■□□□□ 0.61
TRIM23-202ENST00000274327 NBPF6Q5VWK0 638 aa18.88■□□□□ 0.61
TRIM23-202ENST00000274327 NBPF4Q96M43 638 aa18.88■□□□□ 0.61
TRIM23-202ENST00000274327 CPDO75976 1380 aa18.87■□□□□ 0.61
TRIM23-202ENST00000274327 ZC3H6P61129 1189 aaKnown RBP18.87■□□□□ 0.61
TRIM23-202ENST00000274327 TSR2Q969E8 191 aaKnown RBP18.87■□□□□ 0.61
TRIM23-202ENST00000274327 AXIN2Q9Y2T1 843 aa18.87■□□□□ 0.61
TRIM23-202ENST00000274327 ROBO1Q9Y6N7 1651 aa18.87■□□□□ 0.61
TRIM23-202ENST00000274327 CT47B1P0C2W7 299 aaPredicted RBP18.86■□□□□ 0.61
TRIM23-202ENST00000274327 ZNF853P0CG23 659 aa18.86■□□□□ 0.61
TRIM23-202ENST00000274327 MTHFSDQ2M296 383 aaKnown RBP18.86■□□□□ 0.61
TRIM23-202ENST00000274327 CABLES1Q8TDN4 633 aa18.86■□□□□ 0.61
TRIM23-202ENST00000274327 ANKRD24Q8TF21 1146 aa18.86■□□□□ 0.61
TRIM23-202ENST00000274327 PPP4R2Q9NY27 417 aa18.86■□□□□ 0.61
TRIM23-202ENST00000274327 GAS2L2Q8NHY3 880 aa18.86■□□□□ 0.61
TRIM23-202ENST00000274327 THUMPD2Q9BTF0 503 aaKnown RBP18.86■□□□□ 0.61
TRIM23-202ENST00000274327 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
TRIM23-202ENST00000274327 AHDC1Q5TGY3 1603 aaPredicted RBP18.85■□□□□ 0.61
TRIM23-202ENST00000274327 FAM83GA6ND36 823 aa18.85■□□□□ 0.61
TRIM23-202ENST00000274327 PLIN1O60240 522 aa18.84■□□□□ 0.61
TRIM23-202ENST00000274327 GNAI1P63096 354 aa18.84■□□□□ 0.61
TRIM23-202ENST00000274327 USHBP1Q8N6Y0 703 aa18.84■□□□□ 0.61
TRIM23-202ENST00000274327 FAM208AQ9UK61 1670 aaKnown RBP18.84■□□□□ 0.61
TRIM23-202ENST00000274327 EXOSC9Q06265 439 aaKnown RBP18.84■□□□□ 0.61
TRIM23-202ENST00000274327 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.84■□□□□ 0.61
TRIM23-202ENST00000274327 LRRC59Q96AG4 307 aaKnown RBP18.84■□□□□ 0.61
TRIM23-202ENST00000274327 ERBB3P21860 1342 aa18.83■□□□□ 0.6
TRIM23-202ENST00000274327 BCAR3O75815 825 aa18.83■□□□□ 0.6
TRIM23-202ENST00000274327 RARSP54136 660 aaKnown RBP18.83■□□□□ 0.6
TRIM23-202ENST00000274327 LRRC37A3O60309 1634 aa18.82■□□□□ 0.6
TRIM23-202ENST00000274327 DCTN1Q14203 1278 aa18.82■□□□□ 0.6
TRIM23-202ENST00000274327 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
TRIM23-202ENST00000274327 KIAA0232Q92628 1395 aa18.82■□□□□ 0.6
TRIM23-202ENST00000274327 HTATSF1O43719 755 aaKnown RBP18.81■□□□□ 0.6
TRIM23-202ENST00000274327 CRB1P82279 1406 aa18.81■□□□□ 0.6
TRIM23-202ENST00000274327 MBIPQ9NS73 344 aa18.79■□□□□ 0.6
TRIM23-202ENST00000274327 MCM10Q7L590 875 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms