RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 QRICH2Q9H0J4 1663 aa13.05□□□□□ -0.32
TPM3-201ENST00000271850 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
TPM3-201ENST00000271850 SSH2Q76I76 1423 aa13.05□□□□□ -0.32
TPM3-201ENST00000271850 A0A0G2JS52 829 aa13.04□□□□□ -0.32
TPM3-201ENST00000271850 MYT1Q01538 1121 aa13.04□□□□□ -0.32
TPM3-201ENST00000271850 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
TPM3-201ENST00000271850 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
TPM3-201ENST00000271850 CPDO75976 1380 aa13.04□□□□□ -0.32
TPM3-201ENST00000271850 PSDA5PKW4 1024 aaPredicted RBP13.03□□□□□ -0.32
TPM3-201ENST00000271850 STRN4Q9NRL3 753 aa13.03□□□□□ -0.32
TPM3-201ENST00000271850 CENPJQ9HC77 1338 aaPredicted RBP13.03□□□□□ -0.32
TPM3-201ENST00000271850 GALR2O43603 387 aaPredicted RBP13.02□□□□□ -0.33
TPM3-201ENST00000271850 SF3B2Q13435 895 aaKnown RBP13.02□□□□□ -0.33
TPM3-201ENST00000271850 LARP1Q6PKG0 1096 aaKnown RBP13.02□□□□□ -0.33
TPM3-201ENST00000271850 TRPM1Q7Z4N2 1603 aa13.02□□□□□ -0.33
TPM3-201ENST00000271850 BAG6P46379 1132 aa13.01□□□□□ -0.33
TPM3-201ENST00000271850 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
TPM3-201ENST00000271850 USP6P35125 1406 aa13.01□□□□□ -0.33
TPM3-201ENST00000271850 COL5A2P05997 1499 aaPredicted RBP13.01□□□□□ -0.33
TPM3-201ENST00000271850 SLIT3O75094 1523 aa13.01□□□□□ -0.33
TPM3-201ENST00000271850 PIK3C2AO00443 1686 aa13.01□□□□□ -0.33
TPM3-201ENST00000271850 EZH2Q15910 746 aaKnown RBP13□□□□□ -0.33
TPM3-201ENST00000271850 ABTB2Q8N961 1025 aa13□□□□□ -0.33
TPM3-201ENST00000271850 CAMKK2Q96RR4 588 aa13□□□□□ -0.33
TPM3-201ENST00000271850 SIN3AQ96ST3 1273 aa13□□□□□ -0.33
TPM3-201ENST00000271850 COL18A1P39060 1754 aa12.99□□□□□ -0.33
TPM3-201ENST00000271850 GCP02774 474 aa12.99□□□□□ -0.33
TPM3-201ENST00000271850 SRPK2P78362 688 aaKnown RBP12.99□□□□□ -0.33
TPM3-201ENST00000271850 BARGINQ6ZT62 677 aa12.99□□□□□ -0.33
TPM3-201ENST00000271850 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
TPM3-201ENST00000271850 RREB1Q92766 1687 aa12.99□□□□□ -0.33
TPM3-201ENST00000271850 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
TPM3-201ENST00000271850 TRIM37O94972 964 aa12.98□□□□□ -0.33
TPM3-201ENST00000271850 CABP1Q9NZU7 370 aa12.98□□□□□ -0.33
TPM3-201ENST00000271850 PEAK1Q9H792 1746 aa12.98□□□□□ -0.33
TPM3-201ENST00000271850 PARP4Q9UKK3 1724 aaKnown RBP12.98□□□□□ -0.33
TPM3-201ENST00000271850 NUP188Q5SRE5 1749 aa12.97□□□□□ -0.33
TPM3-201ENST00000271850 LRRC37A3O60309 1634 aa12.96□□□□□ -0.33
TPM3-201ENST00000271850 R3HDM1Q15032 1099 aaKnown RBP12.96□□□□□ -0.33
TPM3-201ENST00000271850 AKAP12Q02952 1782 aa12.95□□□□□ -0.34
TPM3-201ENST00000271850 FAM196AQ6ZSG2 479 aa12.95□□□□□ -0.34
TPM3-201ENST00000271850 TCP11L2Q8N4U5 519 aa12.95□□□□□ -0.34
TPM3-201ENST00000271850 AXIN2Q9Y2T1 843 aa12.95□□□□□ -0.34
TPM3-201ENST00000271850 BRD4O60885 1362 aaPredicted RBP12.94□□□□□ -0.34
TPM3-201ENST00000271850 NLRP13Q86W25 1043 aa12.94□□□□□ -0.34
TPM3-201ENST00000271850 WNK3Q9BYP7 1800 aa12.94□□□□□ -0.34
TPM3-201ENST00000271850 AATKQ6ZMQ8 1374 aa12.94□□□□□ -0.34
TPM3-201ENST00000271850 NFAT5O94916 1531 aa12.93□□□□□ -0.34
TPM3-201ENST00000271850 EVA1CP58658 441 aa12.93□□□□□ -0.34
TPM3-201ENST00000271850 PTF1AQ7RTS3 328 aa12.93□□□□□ -0.34
TPM3-201ENST00000271850 CRB1P82279 1406 aa12.93□□□□□ -0.34
TPM3-201ENST00000271850 CPSF1Q10570 1443 aaKnown RBP12.93□□□□□ -0.34
TPM3-201ENST00000271850 CD163L1Q9NR16 1453 aa12.92□□□□□ -0.34
TPM3-201ENST00000271850 APBA3O96018 575 aa12.92□□□□□ -0.34
TPM3-201ENST00000271850 NLRP6P59044 892 aa12.92□□□□□ -0.34
TPM3-201ENST00000271850 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
TPM3-201ENST00000271850 PHF12Q96QT6 1004 aa12.92□□□□□ -0.34
TPM3-201ENST00000271850 TTC21BQ7Z4L5 1316 aa12.91□□□□□ -0.34
TPM3-201ENST00000271850 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
TPM3-201ENST00000271850 THRAP3Q9Y2W1 955 aaKnown RBP12.91□□□□□ -0.34
TPM3-201ENST00000271850 RGPD5Q99666 1765 aa12.91□□□□□ -0.34
TPM3-201ENST00000271850 ROCK2O75116 1388 aaKnown RBP12.91□□□□□ -0.34
TPM3-201ENST00000271850 EVC2Q86UK5 1308 aa12.9□□□□□ -0.34
TPM3-201ENST00000271850 ARHGEF25Q86VW2 580 aa12.9□□□□□ -0.34
TPM3-201ENST00000271850 PARD3Q8TEW0 1356 aa12.9□□□□□ -0.34
TPM3-201ENST00000271850 MON2Q7Z3U7 1717 aa12.9□□□□□ -0.34
TPM3-201ENST00000271850 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
TPM3-201ENST00000271850 PDE3BQ13370 1112 aa12.89□□□□□ -0.35
TPM3-201ENST00000271850 NEUROD1Q13562 356 aa12.89□□□□□ -0.35
TPM3-201ENST00000271850 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
TPM3-201ENST00000271850 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
TPM3-201ENST00000271850 OVOS2A0A0J9YW53 1432 aa12.88□□□□□ -0.35
TPM3-201ENST00000271850 OVOS2Q6IE36 1432 aa12.88□□□□□ -0.35
TPM3-201ENST00000271850 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
TPM3-201ENST00000271850 SBNO2Q9Y2G9 1366 aa12.87□□□□□ -0.35
TPM3-201ENST00000271850 MARCH10Q8NA82 808 aaPredicted RBP12.87□□□□□ -0.35
TPM3-201ENST00000271850 RGPD3A6NKT7 1758 aaPredicted RBP12.86□□□□□ -0.35
TPM3-201ENST00000271850 RGPD4Q7Z3J3 1758 aa12.86□□□□□ -0.35
TPM3-201ENST00000271850 ANO8Q9HCE9 1232 aaPredicted RBP12.86□□□□□ -0.35
TPM3-201ENST00000271850 BCL9O00512 1426 aa12.86□□□□□ -0.35
TPM3-201ENST00000271850 UTRNP46939 3433 aa12.85□□□□□ -0.35
TPM3-201ENST00000271850 SOX12O15370 315 aa12.85□□□□□ -0.35
TPM3-201ENST00000271850 TOM1L2Q6ZVM7 507 aa12.85□□□□□ -0.35
TPM3-201ENST00000271850 PROM2Q8N271 834 aa12.85□□□□□ -0.35
TPM3-201ENST00000271850 TTC21AQ8NDW8 1320 aa12.85□□□□□ -0.35
TPM3-201ENST00000271850 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
TPM3-201ENST00000271850 KTN1Q86UP2 1357 aaKnown RBP12.84□□□□□ -0.35
TPM3-201ENST00000271850 ABCC6O95255 1503 aa12.84□□□□□ -0.35
TPM3-201ENST00000271850 DDB1Q16531 1140 aa12.84□□□□□ -0.35
TPM3-201ENST00000271850 CASZ1Q86V15 1759 aa12.84□□□□□ -0.35
TPM3-201ENST00000271850 POTEB2H3BUK9 544 aa12.83□□□□□ -0.36
TPM3-201ENST00000271850 NME9Q86XW9 330 aa12.83□□□□□ -0.36
TPM3-201ENST00000271850 PDGFDQ9GZP0 370 aaPredicted RBP12.83□□□□□ -0.36
TPM3-201ENST00000271850 PLSCR1O15162 318 aa12.82□□□□□ -0.36
TPM3-201ENST00000271850 CARD10Q9BWT7 1032 aa12.82□□□□□ -0.36
TPM3-201ENST00000271850 TNS2Q63HR2 1409 aa12.81□□□□□ -0.36
TPM3-201ENST00000271850 KCNH5Q8NCM2 988 aa12.81□□□□□ -0.36
TPM3-201ENST00000271850 A0A1W2PP64 1363 aa12.81□□□□□ -0.36
TPM3-201ENST00000271850 LTN1O94822 1766 aa12.8□□□□□ -0.36
TPM3-201ENST00000271850 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms