RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 RIPK4P57078 832 aa13.13□□□□□ -0.31
CHFR-201ENST00000266880 JMYQ8N9B5 988 aa13.13□□□□□ -0.31
CHFR-201ENST00000266880 BANK1Q8NDB2 785 aa13.13□□□□□ -0.31
CHFR-201ENST00000266880 CCDC175P0C221 793 aa13.12□□□□□ -0.31
CHFR-201ENST00000266880 ZSCAN30Q86W11 494 aa13.12□□□□□ -0.31
CHFR-201ENST00000266880 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
CHFR-201ENST00000266880 LMAN1P49257 510 aa13.12□□□□□ -0.31
CHFR-201ENST00000266880 WWC2Q6AWC2 1192 aa13.12□□□□□ -0.31
CHFR-201ENST00000266880 CEP57L1Q8IYX8 460 aa13.12□□□□□ -0.31
CHFR-201ENST00000266880 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
CHFR-201ENST00000266880 CTR9Q6PD62 1173 aa13.12□□□□□ -0.31
CHFR-201ENST00000266880 DNA2P51530 1060 aa13.12□□□□□ -0.31
CHFR-201ENST00000266880 COG3Q96JB2 828 aa13.12□□□□□ -0.31
CHFR-201ENST00000266880 SMC1AQ14683 1233 aaKnown RBP13.11□□□□□ -0.31
CHFR-201ENST00000266880 LUZP1Q86V48 1076 aa13.11□□□□□ -0.31
CHFR-201ENST00000266880 GBP3Q9H0R5 595 aa13.11□□□□□ -0.31
CHFR-201ENST00000266880 TRAK1Q9UPV9 953 aa13.11□□□□□ -0.31
CHFR-201ENST00000266880 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
CHFR-201ENST00000266880 CCDC178Q5BJE1 867 aa13.11□□□□□ -0.31
CHFR-201ENST00000266880 CFAP57Q96MR6 1250 aa13.11□□□□□ -0.31
CHFR-201ENST00000266880 UPF3BQ9BZI7 483 aaKnown RBP13.11□□□□□ -0.31
CHFR-201ENST00000266880 AAMPQ13685 434 aa13.1□□□□□ -0.31
CHFR-201ENST00000266880 WDR33Q9C0J8 1336 aaKnown RBP13.1□□□□□ -0.31
CHFR-201ENST00000266880 EIF5P55010 431 aaKnown RBP13.1□□□□□ -0.31
CHFR-201ENST00000266880 CAMK4Q16566 473 aa13.1□□□□□ -0.31
CHFR-201ENST00000266880 CCDC160A6NGH7 325 aa13.1□□□□□ -0.31
CHFR-201ENST00000266880 DNAAF4Q8WXU2 420 aa13.1□□□□□ -0.31
CHFR-201ENST00000266880 C1orf115Q9H7X2 142 aa13.1□□□□□ -0.31
CHFR-201ENST00000266880 NUP62CLQ9H1M0 184 aa13.1□□□□□ -0.31
CHFR-201ENST00000266880 ST20-MTHFSA0A0A6YYL1 179 aa13.1□□□□□ -0.31
CHFR-201ENST00000266880 SSBP05455 408 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHFR-201ENST00000266880 USP47Q96K76 1375 aa13.1□□□□□ -0.31
CHFR-201ENST00000266880 KANK4Q5T7N3 995 aaPredicted RBP13.09□□□□□ -0.31
CHFR-201ENST00000266880 KIF18AQ8NI77 898 aa13.09□□□□□ -0.31
CHFR-201ENST00000266880 KRT85P78386 507 aa13.09□□□□□ -0.31
CHFR-201ENST00000266880 ANAPC15P60006 121 aa13.09□□□□□ -0.31
CHFR-201ENST00000266880 GSTTP1A0A1W2PQM5 241 aa13.09□□□□□ -0.31
CHFR-201ENST00000266880 NEBLO76041 1014 aa13.09□□□□□ -0.31
CHFR-201ENST00000266880 UBTFL1P0CB47 393 aaPredicted RBP13.09□□□□□ -0.31
CHFR-201ENST00000266880 CPSF2Q9P2I0 782 aaKnown RBP13.09□□□□□ -0.31
CHFR-201ENST00000266880 DAAM2Q86T65 1068 aa13.09□□□□□ -0.31
CHFR-201ENST00000266880 SPATA32Q96LK8 384 aa13.09□□□□□ -0.31
CHFR-201ENST00000266880 PRKRIP1Q9H875 184 aaPredicted RBP13.09□□□□□ -0.31
CHFR-201ENST00000266880 KIF2AO00139 706 aaPredicted RBP13.09□□□□□ -0.31
CHFR-201ENST00000266880 MATR3P43243 847 aaKnown RBP eCLIP13.08□□□□□ -0.31
CHFR-201ENST00000266880 K7ELQ4 463 aaPredicted RBP13.08□□□□□ -0.31
CHFR-201ENST00000266880 TSPYL4Q9UJ04 414 aa13.08□□□□□ -0.31
CHFR-201ENST00000266880 FMN1Q68DA7 1419 aa13.08□□□□□ -0.32
CHFR-201ENST00000266880 MCM2P49736 904 aa13.08□□□□□ -0.32
CHFR-201ENST00000266880 CFAP100Q494V2 611 aa13.08□□□□□ -0.32
CHFR-201ENST00000266880 LIG1P18858 919 aa13.08□□□□□ -0.32
CHFR-201ENST00000266880 PPM1EQ8WY54 764 aa13.08□□□□□ -0.32
CHFR-201ENST00000266880 DDX23Q9BUQ8 820 aaKnown RBP13.08□□□□□ -0.32
CHFR-201ENST00000266880 KIF3BO15066 747 aa13.08□□□□□ -0.32
CHFR-201ENST00000266880 CTNNBL1Q8WYA6 563 aaPredicted RBP13.08□□□□□ -0.32
CHFR-201ENST00000266880 KIF5CO60282 957 aa13.08□□□□□ -0.32
CHFR-201ENST00000266880 AIMP1Q12904 312 aaKnown RBP13.08□□□□□ -0.32
CHFR-201ENST00000266880 MAP4K4O95819 1239 aaPredicted RBP13.08□□□□□ -0.32
CHFR-201ENST00000266880 C16orf45Q96MC5 204 aaPredicted RBP13.08□□□□□ -0.32
CHFR-201ENST00000266880 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.32
CHFR-201ENST00000266880 SFPQP23246 707 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHFR-201ENST00000266880 MCM4P33991 863 aa13.07□□□□□ -0.32
CHFR-201ENST00000266880 ATP2B2Q01814 1243 aa13.07□□□□□ -0.32
CHFR-201ENST00000266880 TRMT1Q9NXH9 659 aaKnown RBP13.07□□□□□ -0.32
CHFR-201ENST00000266880 MAATS1Q7Z4T9 603 aa13.07□□□□□ -0.32
CHFR-201ENST00000266880 SEPT6Q14141 434 aa13.07□□□□□ -0.32
CHFR-201ENST00000266880 SYTL4Q96C24 671 aaPredicted RBP13.07□□□□□ -0.32
CHFR-201ENST00000266880 ANKRD30AQ9BXX3 1397 aa13.07□□□□□ -0.32
CHFR-201ENST00000266880 VPS8Q8N3P4 1428 aa13.07□□□□□ -0.32
CHFR-201ENST00000266880 SMARCC1Q92922 1105 aaPredicted RBP13.07□□□□□ -0.32
CHFR-201ENST00000266880 URI1O94763 535 aaPredicted RBP13.07□□□□□ -0.32
CHFR-201ENST00000266880 GIGYF2Q6Y7W6 1299 aaKnown RBP13.06□□□□□ -0.32
CHFR-201ENST00000266880 MCM3P25205 808 aa13.06□□□□□ -0.32
CHFR-201ENST00000266880 SPA17Q15506 151 aa13.06□□□□□ -0.32
CHFR-201ENST00000266880 MAP3K11Q16584 847 aa13.06□□□□□ -0.32
CHFR-201ENST00000266880 NAP1L3Q99457 506 aaPredicted RBP13.06□□□□□ -0.32
CHFR-201ENST00000266880 SLC3A2P08195 630 aaKnown RBP13.06□□□□□ -0.32
CHFR-201ENST00000266880 RIC3Q7Z5B4 369 aa13.06□□□□□ -0.32
CHFR-201ENST00000266880 CYP46A1Q9Y6A2 500 aa13.06□□□□□ -0.32
CHFR-201ENST00000266880 LARP1BQ659C4 914 aaKnown RBP13.05□□□□□ -0.32
CHFR-201ENST00000266880 GCOM1H8Y6P7 765 aaPredicted RBP13.05□□□□□ -0.32
CHFR-201ENST00000266880 MYZAPP0CAP1 466 aa13.05□□□□□ -0.32
CHFR-201ENST00000266880 EVA1CP58658 441 aa13.05□□□□□ -0.32
CHFR-201ENST00000266880 WDR66Q8TBY9 1149 aa13.05□□□□□ -0.32
CHFR-201ENST00000266880 ERC1Q8IUD2 1116 aa13.05□□□□□ -0.32
CHFR-201ENST00000266880 IMMTQ16891 758 aaKnown RBP13.05□□□□□ -0.32
CHFR-201ENST00000266880 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
CHFR-201ENST00000266880 TBC1D2BQ9UPU7 963 aa13.04□□□□□ -0.32
CHFR-201ENST00000266880 SMTNL1A8MU46 457 aa13.04□□□□□ -0.32
CHFR-201ENST00000266880 ZNF397Q8NF99 534 aaPredicted RBP13.04□□□□□ -0.32
CHFR-201ENST00000266880 RUNDC1Q96C34 613 aa13.04□□□□□ -0.32
CHFR-201ENST00000266880 MSL1Q68DK7 614 aa13.04□□□□□ -0.32
CHFR-201ENST00000266880 DZIP1Q86YF9 867 aaKnown RBP13.04□□□□□ -0.32
CHFR-201ENST00000266880 BMS1Q14692 1282 aaKnown RBP13.04□□□□□ -0.32
CHFR-201ENST00000266880 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.329e-9■■□□□ 12.7
CHFR-201ENST00000266880 HOOK3Q86VS8 718 aa13.03□□□□□ -0.32
CHFR-201ENST00000266880 HMOX1P09601 288 aa13.03□□□□□ -0.32
CHFR-201ENST00000266880 SPECC1LQ69YQ0 1117 aa13.03□□□□□ -0.32
CHFR-201ENST00000266880 RSPH14Q9UHP6 348 aa13.03□□□□□ -0.32
CHFR-201ENST00000266880 TRIM22Q8IYM9 498 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms