RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CD163L1Q9NR16 1453 aa20.92■□□□□ 0.94
SQLE-201ENST00000265896 RBM25P49756 843 aaKnown RBP20.91■□□□□ 0.94
SQLE-201ENST00000265896 BMP2KLQ5H9B9 411 aa20.91■□□□□ 0.94
SQLE-201ENST00000265896 PNNQ9H307 717 aaKnown RBP20.91■□□□□ 0.94
SQLE-201ENST00000265896 YTHDC2Q9H6S0 1430 aaKnown RBP20.91■□□□□ 0.94
SQLE-201ENST00000265896 COL3A1P02461 1466 aaPredicted RBP20.91■□□□□ 0.94
SQLE-201ENST00000265896 SLC4A10Q6U841 1118 aa20.91■□□□□ 0.94
SQLE-201ENST00000265896 FOXD4L6Q3SYB3 417 aaPredicted RBP20.91■□□□□ 0.94
SQLE-201ENST00000265896 FOXD4L3Q6VB84 417 aaPredicted RBP20.91■□□□□ 0.94
SQLE-201ENST00000265896 ALDH1L2Q3SY69 923 aa20.9■□□□□ 0.94
SQLE-201ENST00000265896 ZC3H13Q5T200 1668 aaKnown RBP20.89■□□□□ 0.94
SQLE-201ENST00000265896 NEXMIFQ5QGS0 1516 aa20.89■□□□□ 0.94
SQLE-201ENST00000265896 IL16Q14005 1332 aa20.89■□□□□ 0.93
SQLE-201ENST00000265896 ARHGEF28Q8N1W1 1705 aaKnown RBP20.89■□□□□ 0.93
SQLE-201ENST00000265896 ZBTB7CA1YPR0 619 aa20.88■□□□□ 0.93
SQLE-201ENST00000265896 DDX11L8A8MPP1 907 aa20.88■□□□□ 0.93
SQLE-201ENST00000265896 SULT6B1Q6IMI4 303 aa20.88■□□□□ 0.93
SQLE-201ENST00000265896 SLC52A1Q9NWF4 448 aa20.88■□□□□ 0.93
SQLE-201ENST00000265896 LRRC7Q96NW7 1537 aa20.88■□□□□ 0.93
SQLE-201ENST00000265896 F6X3S4 739 aa20.88■□□□□ 0.93
SQLE-201ENST00000265896 K7ELQ4 463 aaPredicted RBP20.88■□□□□ 0.93
SQLE-201ENST00000265896 ADGRB2O60241 1585 aa20.88■□□□□ 0.93
SQLE-201ENST00000265896 IL13P35225 146 aa20.87■□□□□ 0.93
SQLE-201ENST00000265896 CYB5RLQ6IPT4 315 aa20.87■□□□□ 0.93
SQLE-201ENST00000265896 LMTK2Q8IWU2 1503 aa20.87■□□□□ 0.93
SQLE-201ENST00000265896 MRE11P49959 708 aa20.87■□□□□ 0.93
SQLE-201ENST00000265896 GNAI1P63096 354 aa20.87■□□□□ 0.93
SQLE-201ENST00000265896 MCTP1Q6DN14 999 aa20.87■□□□□ 0.93
SQLE-201ENST00000265896 PLEKHG5O94827 1062 aa20.86■□□□□ 0.93
SQLE-201ENST00000265896 DTNBO60941 627 aa20.85■□□□□ 0.93
SQLE-201ENST00000265896 PLEKHM2Q8IWE5 1019 aa20.85■□□□□ 0.93
SQLE-201ENST00000265896 DDX49Q9Y6V7 483 aaKnown RBP20.85■□□□□ 0.93
SQLE-201ENST00000265896 PTPRMP28827 1452 aa20.85■□□□□ 0.93
SQLE-201ENST00000265896 FOXO3O43524 673 aa20.85■□□□□ 0.93
SQLE-201ENST00000265896 GBP4Q96PP9 640 aa20.85■□□□□ 0.93
SQLE-201ENST00000265896 DDIT3P35638 169 aa20.85■□□□□ 0.93
SQLE-201ENST00000265896 RAB3GAP1Q15042 981 aa20.85■□□□□ 0.93
SQLE-201ENST00000265896 OSCARQ8IYS5 282 aa20.85■□□□□ 0.93
SQLE-201ENST00000265896 ZGPATQ8N5A5 531 aaKnown RBP20.85■□□□□ 0.93
SQLE-201ENST00000265896 GCC1Q96CN9 775 aa20.85■□□□□ 0.93
SQLE-201ENST00000265896 MEIS3Q99687 375 aa20.85■□□□□ 0.93
SQLE-201ENST00000265896 TRIM44Q96DX7 344 aaPredicted RBP20.84■□□□□ 0.93
SQLE-201ENST00000265896 AK9Q5TCS8 1911 aa20.84■□□□□ 0.93
SQLE-201ENST00000265896 COG3Q96JB2 828 aa20.84■□□□□ 0.93
SQLE-201ENST00000265896 CDC45O75419 566 aa20.82■□□□□ 0.92
SQLE-201ENST00000265896 PUS7Q96PZ0 661 aaKnown RBP20.82■□□□□ 0.92
SQLE-201ENST00000265896 NEURL4Q96JN8 1562 aa20.82■□□□□ 0.92
SQLE-201ENST00000265896 MLH3Q9UHC1 1453 aa20.82■□□□□ 0.92
SQLE-201ENST00000265896 SNX21Q969T3 373 aa20.82■□□□□ 0.92
SQLE-201ENST00000265896 NUDT16Q96DE0 195 aaKnown RBP20.82■□□□□ 0.92
SQLE-201ENST00000265896 PNPLA6Q8IY17 1366 aa20.81■□□□□ 0.92
SQLE-201ENST00000265896 HSP90AB2PQ58FF8 381 aa20.81■□□□□ 0.92
SQLE-201ENST00000265896 IFT57Q9NWB7 429 aa20.81■□□□□ 0.92
SQLE-201ENST00000265896 CAVIN1Q6NZI2 390 aaKnown RBP20.81■□□□□ 0.92
SQLE-201ENST00000265896 CFAP44Q96MT7 982 aa20.81■□□□□ 0.92
SQLE-201ENST00000265896 RBM27Q9P2N5 1060 aaKnown RBP20.81■□□□□ 0.92
SQLE-201ENST00000265896 FAM135BQ49AJ0 1406 aa20.8■□□□□ 0.92
SQLE-201ENST00000265896 HECW2Q9P2P5 1572 aa20.8■□□□□ 0.92
SQLE-201ENST00000265896 PIK3C2BO00750 1634 aa20.8■□□□□ 0.92
SQLE-201ENST00000265896 MYO5BQ9ULV0 1848 aa20.8■□□□□ 0.92
SQLE-201ENST00000265896 ESPNB1AK53 854 aa20.79■□□□□ 0.92
SQLE-201ENST00000265896 G2E3Q7L622 706 aa20.79■□□□□ 0.92
SQLE-201ENST00000265896 SDSP20132 328 aa20.79■□□□□ 0.92
SQLE-201ENST00000265896 ZMYM3Q14202 1370 aa20.79■□□□□ 0.92
SQLE-201ENST00000265896 SLC4A2P04920 1241 aa20.79■□□□□ 0.92
SQLE-201ENST00000265896 EXOC6BQ9Y2D4 811 aa20.79■□□□□ 0.92
SQLE-201ENST00000265896 ABCC4O15439 1325 aa20.78■□□□□ 0.92
SQLE-201ENST00000265896 BAG4O95429 457 aaKnown RBP20.78■□□□□ 0.92
SQLE-201ENST00000265896 ZNF428Q96B54 188 aa20.78■□□□□ 0.92
SQLE-201ENST00000265896 WASLO00401 505 aaPredicted RBP20.77■□□□□ 0.92
SQLE-201ENST00000265896 ZNF853P0CG23 659 aa20.77■□□□□ 0.92
SQLE-201ENST00000265896 MPNDQ8N594 471 aa20.77■□□□□ 0.92
SQLE-201ENST00000265896 NUTM2GQ5VZR2 741 aa20.76■□□□□ 0.91
SQLE-201ENST00000265896 TTC22Q5TAA0 569 aa20.76■□□□□ 0.91
SQLE-201ENST00000265896 API5Q9BZZ5 524 aaKnown RBP20.76■□□□□ 0.91
SQLE-201ENST00000265896 USP32Q8NFA0 1604 aa20.76■□□□□ 0.91
SQLE-201ENST00000265896 PRPF40AO75400 957 aaKnown RBP20.76■□□□□ 0.91
SQLE-201ENST00000265896 EIF4A2Q14240 407 aaKnown RBP20.76■□□□□ 0.91
SQLE-201ENST00000265896 MSH6P52701 1360 aa20.74■□□□□ 0.91
SQLE-201ENST00000265896 CLCN1P35523 988 aa20.74■□□□□ 0.91
SQLE-201ENST00000265896 CEP85Q6P2H3 762 aa20.74■□□□□ 0.91
SQLE-201ENST00000265896 DCTPP1Q9H773 170 aa20.74■□□□□ 0.91
SQLE-201ENST00000265896 METP08581 1390 aa20.74■□□□□ 0.91
SQLE-201ENST00000265896 NASPP49321 788 aaPredicted RBP20.73■□□□□ 0.91
SQLE-201ENST00000265896 FAM69CQ0P6D2 419 aa20.73■□□□□ 0.91
SQLE-201ENST00000265896 NCBP3Q53F19 620 aaKnown RBP20.73■□□□□ 0.91
SQLE-201ENST00000265896 NCOA3Q9Y6Q9 1424 aa20.73■□□□□ 0.91
SQLE-201ENST00000265896 CALD1Q05682 793 aaKnown RBP20.73■□□□□ 0.91
SQLE-201ENST00000265896 USP26Q9BXU7 913 aa20.73■□□□□ 0.91
SQLE-201ENST00000265896 ARHGEF40Q8TER5 1519 aa20.73■□□□□ 0.91
SQLE-201ENST00000265896 LARP6Q9BRS8 491 aaKnown RBP20.73■□□□□ 0.91
SQLE-201ENST00000265896 ARHGAP45Q92619 1136 aa20.72■□□□□ 0.91
SQLE-201ENST00000265896 ARID3AQ99856 593 aa20.72■□□□□ 0.91
SQLE-201ENST00000265896 RIMS2Q9UQ26 1411 aa20.72■□□□□ 0.91
SQLE-201ENST00000265896 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.72■□□□□ 0.91
SQLE-201ENST00000265896 GOLGA6L22H0YM25 854 aa20.71■□□□□ 0.91
SQLE-201ENST00000265896 MAP4K4O95819 1239 aaPredicted RBP20.71■□□□□ 0.91
SQLE-201ENST00000265896 RNF214Q8ND24 703 aa20.71■□□□□ 0.91
SQLE-201ENST00000265896 NSFL1CQ9UNZ2 370 aaKnown RBP20.71■□□□□ 0.91
SQLE-201ENST00000265896 RILPL2Q969X0 211 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms