RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 NHSL1Q5SYE7 1610 aa10.93□□□□□ -0.66
COPS4-201ENST00000264389 RGPD5Q99666 1765 aa10.93□□□□□ -0.66
COPS4-201ENST00000264389 RTL1A6NKG5 1358 aa10.92□□□□□ -0.66
COPS4-201ENST00000264389 KIF24Q5T7B8 1368 aa10.92□□□□□ -0.66
COPS4-201ENST00000264389 MAP3K19Q56UN5 1328 aa10.92□□□□□ -0.66
COPS4-201ENST00000264389 TCP11L2Q8N4U5 519 aa10.92□□□□□ -0.66
COPS4-201ENST00000264389 RGPD2P0DJD1 1756 aa10.92□□□□□ -0.66
COPS4-201ENST00000264389 NEFMP07197 916 aa10.92□□□□□ -0.66
COPS4-201ENST00000264389 IL13P35225 146 aa10.92□□□□□ -0.66
COPS4-201ENST00000264389 XPCQ01831 940 aaPredicted RBP10.92□□□□□ -0.66
COPS4-201ENST00000264389 GOLGA2Q08379 1002 aa10.92□□□□□ -0.66
COPS4-201ENST00000264389 CDCA7LQ96GN5 454 aa10.92□□□□□ -0.66
COPS4-201ENST00000264389 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
COPS4-201ENST00000264389 PXDNQ92626 1479 aa10.91□□□□□ -0.66
COPS4-201ENST00000264389 AMPHP49418 695 aa10.91□□□□□ -0.66
COPS4-201ENST00000264389 KRT28Q7Z3Y7 464 aa10.91□□□□□ -0.66
COPS4-201ENST00000264389 PLEKHF1Q96S99 279 aa10.91□□□□□ -0.66
COPS4-201ENST00000264389 RRP7AQ9Y3A4 280 aaKnown RBP10.91□□□□□ -0.66
COPS4-201ENST00000264389 MED1Q15648 1581 aaPredicted RBP10.91□□□□□ -0.66
COPS4-201ENST00000264389 TNS3Q68CZ2 1445 aa10.91□□□□□ -0.66
COPS4-201ENST00000264389 NPHP3Q7Z494 1330 aa10.9□□□□□ -0.66
COPS4-201ENST00000264389 FCHSD2O94868 740 aa10.9□□□□□ -0.66
COPS4-201ENST00000264389 FKBP8Q14318 412 aa10.9□□□□□ -0.66
COPS4-201ENST00000264389 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
COPS4-201ENST00000264389 RSPH6AQ9H0K4 717 aa10.9□□□□□ -0.66
COPS4-201ENST00000264389 ARHGEF10O15013 1369 aa10.9□□□□□ -0.66
COPS4-201ENST00000264389 HMOX1P09601 288 aa10.89□□□□□ -0.67
COPS4-201ENST00000264389 PRKAR2BP31323 418 aa10.89□□□□□ -0.67
COPS4-201ENST00000264389 EIF4A2Q14240 407 aaKnown RBP10.89□□□□□ -0.67
COPS4-201ENST00000264389 KCNH5Q8NCM2 988 aa10.89□□□□□ -0.67
COPS4-201ENST00000264389 CCDC27Q2M243 656 aa10.89□□□□□ -0.67
COPS4-201ENST00000264389 HSP90AB2PQ58FF8 381 aa10.89□□□□□ -0.67
COPS4-201ENST00000264389 LMOD2Q6P5Q4 547 aa10.89□□□□□ -0.67
COPS4-201ENST00000264389 WWC1Q8IX03 1113 aa10.89□□□□□ -0.67
COPS4-201ENST00000264389 FAM208AQ9UK61 1670 aaKnown RBP10.89□□□□□ -0.67
COPS4-201ENST00000264389 USP19O94966 1318 aa10.88□□□□□ -0.67
COPS4-201ENST00000264389 CAMTA1Q9Y6Y1 1673 aa10.88□□□□□ -0.67
COPS4-201ENST00000264389 E9PSI1 815 aa10.88□□□□□ -0.67
COPS4-201ENST00000264389 LTBP4Q8N2S1 1624 aa10.88□□□□□ -0.67
COPS4-201ENST00000264389 ROBO1Q9Y6N7 1651 aa10.88□□□□□ -0.67
COPS4-201ENST00000264389 VIRMAQ69YN4 1812 aaKnown RBP10.87□□□□□ -0.67
COPS4-201ENST00000264389 HOXC9P31274 260 aa10.87□□□□□ -0.67
COPS4-201ENST00000264389 TMPOP42166 694 aaKnown RBP10.87□□□□□ -0.67
COPS4-201ENST00000264389 SLFN5Q08AF3 891 aa10.87□□□□□ -0.67
COPS4-201ENST00000264389 DUSP27Q5VZP5 1158 aa10.87□□□□□ -0.67
COPS4-201ENST00000264389 ATXN8OSP0DMR3 200 aa10.87□□□□□ -0.67
COPS4-201ENST00000264389 BRINP3Q76B58 766 aa10.87□□□□□ -0.67
COPS4-201ENST00000264389 RCAN3Q9UKA8 241 aa10.87□□□□□ -0.67
COPS4-201ENST00000264389 ABCC6O95255 1503 aa10.86□□□□□ -0.67
COPS4-201ENST00000264389 WDR63Q8IWG1 891 aa10.86□□□□□ -0.67
COPS4-201ENST00000264389 DDX17Q92841 729 aaKnown RBP10.86□□□□□ -0.67
COPS4-201ENST00000264389 COL18A1P39060 1754 aa10.85□□□□□ -0.67
COPS4-201ENST00000264389 ZBTB7CA1YPR0 619 aa10.85□□□□□ -0.67
COPS4-201ENST00000264389 RIPK4P57078 832 aa10.85□□□□□ -0.67
COPS4-201ENST00000264389 IRX6P78412 446 aaPredicted RBP10.85□□□□□ -0.67
COPS4-201ENST00000264389 SULT6B1Q6IMI4 303 aa10.85□□□□□ -0.67
COPS4-201ENST00000264389 SLAIN2Q9P270 581 aa10.85□□□□□ -0.67
COPS4-201ENST00000264389 RNF123Q5XPI4 1314 aa10.85□□□□□ -0.67
COPS4-201ENST00000264389 IGSF1Q8N6C5 1336 aa10.85□□□□□ -0.67
COPS4-201ENST00000264389 PLEKHG5O94827 1062 aa10.84□□□□□ -0.67
COPS4-201ENST00000264389 NFE2L2Q16236 605 aa10.84□□□□□ -0.67
COPS4-201ENST00000264389 SPINK5Q9NQ38 1064 aaPredicted RBP10.84□□□□□ -0.67
COPS4-201ENST00000264389 KDRP35968 1356 aa10.84□□□□□ -0.67
COPS4-201ENST00000264389 GCP02774 474 aa10.84□□□□□ -0.67
COPS4-201ENST00000264389 AEBP1Q8IUX7 1158 aa10.84□□□□□ -0.67
COPS4-201ENST00000264389 TRMT2AQ8IZ69 625 aaKnown RBP10.84□□□□□ -0.67
COPS4-201ENST00000264389 SPATA31A3Q5VYP0 1347 aa10.83□□□□□ -0.68
COPS4-201ENST00000264389 RRP1P56182 461 aaKnown RBP10.83□□□□□ -0.68
COPS4-201ENST00000264389 IP6K1Q92551 441 aa10.83□□□□□ -0.68
COPS4-201ENST00000264389 PHACTR3Q96KR7 559 aa10.83□□□□□ -0.68
COPS4-201ENST00000264389 TRIM35Q9UPQ4 493 aa10.83□□□□□ -0.68
COPS4-201ENST00000264389 LRRC37A3O60309 1634 aa10.83□□□□□ -0.68
COPS4-201ENST00000264389 AHDC1Q5TGY3 1603 aaPredicted RBP10.83□□□□□ -0.68
COPS4-201ENST00000264389 LMO7Q8WWI1 1683 aa10.82□□□□□ -0.68
COPS4-201ENST00000264389 LMOD3Q0VAK6 560 aa10.82□□□□□ -0.68
COPS4-201ENST00000264389 LTV1Q96GA3 475 aaPredicted RBP10.82□□□□□ -0.68
COPS4-201ENST00000264389 MYH16Q9H6N6 1097 aa10.82□□□□□ -0.68
COPS4-201ENST00000264389 ATF5Q9Y2D1 282 aaPredicted RBP10.82□□□□□ -0.68
COPS4-201ENST00000264389 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
COPS4-201ENST00000264389 ARHGEF25Q86VW2 580 aa10.81□□□□□ -0.68
COPS4-201ENST00000264389 EYA1Q99502 592 aa10.81□□□□□ -0.68
COPS4-201ENST00000264389 PHLPP1O60346 1717 aa10.81□□□□□ -0.68
COPS4-201ENST00000264389 SOS2Q07890 1332 aaPredicted RBP10.81□□□□□ -0.68
COPS4-201ENST00000264389 IL16Q14005 1332 aa10.81□□□□□ -0.68
COPS4-201ENST00000264389 ERICH6BQ5W0A0 696 aa10.81□□□□□ -0.68
COPS4-201ENST00000264389 CALD1Q05682 793 aaKnown RBP10.8□□□□□ -0.68
COPS4-201ENST00000264389 FANCIQ9NVI1 1328 aa10.8□□□□□ -0.68
COPS4-201ENST00000264389 COL22A1Q8NFW1 1626 aaPredicted RBP10.79□□□□□ -0.68
COPS4-201ENST00000264389 NCAPD2Q15021 1401 aa10.79□□□□□ -0.68
COPS4-201ENST00000264389 PARP4Q9UKK3 1724 aaKnown RBP10.78□□□□□ -0.68
COPS4-201ENST00000264389 ZC3H6P61129 1189 aaKnown RBP10.78□□□□□ -0.68
COPS4-201ENST00000264389 CPDO75976 1380 aa10.77□□□□□ -0.68
COPS4-201ENST00000264389 COL16A1Q07092 1604 aaPredicted RBP10.77□□□□□ -0.69
COPS4-201ENST00000264389 USHBP1Q8N6Y0 703 aa10.77□□□□□ -0.69
COPS4-201ENST00000264389 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.77□□□□□ -0.69
COPS4-201ENST00000264389 GAS2L2Q8NHY3 880 aa10.77□□□□□ -0.69
COPS4-201ENST00000264389 CABLES1Q8TDN4 633 aa10.77□□□□□ -0.69
COPS4-201ENST00000264389 ANKRD24Q8TF21 1146 aa10.77□□□□□ -0.69
COPS4-201ENST00000264389 TSR2Q969E8 191 aaKnown RBP10.77□□□□□ -0.69
COPS4-201ENST00000264389 PKD1L3Q7Z443 1732 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms