RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 COL14A1Q05707 1796 aaKnown RBP16.93■□□□□ 0.3
CLNS1A-201ENST00000263309 SLIT3O75094 1523 aa16.93■□□□□ 0.3
CLNS1A-201ENST00000263309 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
CLNS1A-201ENST00000263309 OVOS2A0A0J9YW53 1432 aa16.93■□□□□ 0.3
CLNS1A-201ENST00000263309 OVOS2Q6IE36 1432 aa16.93■□□□□ 0.3
CLNS1A-201ENST00000263309 NPC1L1Q9UHC9 1359 aa16.92■□□□□ 0.3
CLNS1A-201ENST00000263309 RRS1Q15050 365 aaKnown RBP16.92■□□□□ 0.3
CLNS1A-201ENST00000263309 LTV1Q96GA3 475 aaPredicted RBP16.92■□□□□ 0.3
CLNS1A-201ENST00000263309 PIK3C2AO00443 1686 aa16.91■□□□□ 0.3
CLNS1A-201ENST00000263309 RTL1A6NKG5 1358 aa16.91■□□□□ 0.3
CLNS1A-201ENST00000263309 NRKQ7Z2Y5 1582 aa16.91■□□□□ 0.3
CLNS1A-201ENST00000263309 BLMP54132 1417 aaPredicted RBP16.91■□□□□ 0.3
CLNS1A-201ENST00000263309 RALBP1Q15311 655 aa16.91■□□□□ 0.3
CLNS1A-201ENST00000263309 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
CLNS1A-201ENST00000263309 TCP11L2Q8N4U5 519 aa16.91■□□□□ 0.3
CLNS1A-201ENST00000263309 ANKRD24Q8TF21 1146 aa16.91■□□□□ 0.3
CLNS1A-201ENST00000263309 MAP3K19Q56UN5 1328 aa16.91■□□□□ 0.3
CLNS1A-201ENST00000263309 SLIT2O94813 1529 aa16.91■□□□□ 0.3
CLNS1A-201ENST00000263309 HOXC9P31274 260 aa16.9■□□□□ 0.3
CLNS1A-201ENST00000263309 WDR17Q8IZU2 1322 aa16.9■□□□□ 0.3
CLNS1A-201ENST00000263309 FLT4P35916 1363 aa16.89■□□□□ 0.3
CLNS1A-201ENST00000263309 MYOM1P52179 1685 aa16.89■□□□□ 0.29
CLNS1A-201ENST00000263309 PDE3BQ13370 1112 aa16.89■□□□□ 0.29
CLNS1A-201ENST00000263309 NUDCQ9Y266 331 aa16.89■□□□□ 0.29
CLNS1A-201ENST00000263309 ATRNO75882 1429 aa16.88■□□□□ 0.29
CLNS1A-201ENST00000263309 BCL9LQ86UU0 1499 aa16.88■□□□□ 0.29
CLNS1A-201ENST00000263309 LARP1Q6PKG0 1096 aaKnown RBP16.88■□□□□ 0.29
CLNS1A-201ENST00000263309 CARD10Q9BWT7 1032 aa16.88■□□□□ 0.29
CLNS1A-201ENST00000263309 PHRF1Q9P1Y6 1649 aaKnown RBP16.88■□□□□ 0.29
CLNS1A-201ENST00000263309 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
CLNS1A-201ENST00000263309 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
CLNS1A-201ENST00000263309 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
CLNS1A-201ENST00000263309 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
CLNS1A-201ENST00000263309 CRB1P82279 1406 aa16.87■□□□□ 0.29
CLNS1A-201ENST00000263309 ABCC6O95255 1503 aa16.86■□□□□ 0.29
CLNS1A-201ENST00000263309 ANP32CO43423 234 aa16.86■□□□□ 0.29
CLNS1A-201ENST00000263309 NEFMP07197 916 aa16.86■□□□□ 0.29
CLNS1A-201ENST00000263309 FAM98CQ17RN3 349 aaKnown RBP16.86■□□□□ 0.29
CLNS1A-201ENST00000263309 BARGINQ6ZT62 677 aa16.86■□□□□ 0.29
CLNS1A-201ENST00000263309 RAPGEF4Q8WZA2 1011 aa16.86■□□□□ 0.29
CLNS1A-201ENST00000263309 AXIN2Q9Y2T1 843 aa16.86■□□□□ 0.29
CLNS1A-201ENST00000263309 SPATA31A1Q5TZJ5 1347 aa16.86■□□□□ 0.29
CLNS1A-201ENST00000263309 EP400Q96L91 3159 aa16.86■□□□□ 0.29
CLNS1A-201ENST00000263309 KIF20BQ96Q89 1820 aa16.86■□□□□ 0.29
CLNS1A-201ENST00000263309 NWD2Q9ULI1 1742 aa16.85■□□□□ 0.29
CLNS1A-201ENST00000263309 EXOC5O00471 708 aa16.85■□□□□ 0.29
CLNS1A-201ENST00000263309 MTHFSP49914 203 aa16.85■□□□□ 0.29
CLNS1A-201ENST00000263309 EMILIN1Q9Y6C2 1016 aa16.85■□□□□ 0.29
CLNS1A-201ENST00000263309 INSRP06213 1382 aa16.85■□□□□ 0.29
CLNS1A-201ENST00000263309 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
CLNS1A-201ENST00000263309 ERBB3P21860 1342 aa16.84■□□□□ 0.29
CLNS1A-201ENST00000263309 DIAPH1O60610 1272 aaKnown RBP16.83■□□□□ 0.28
CLNS1A-201ENST00000263309 IL2RBP14784 551 aa16.83■□□□□ 0.28
CLNS1A-201ENST00000263309 FBLN1P23142 703 aa16.83■□□□□ 0.28
CLNS1A-201ENST00000263309 DDB1Q16531 1140 aa16.83■□□□□ 0.28
CLNS1A-201ENST00000263309 HSP90AB2PQ58FF8 381 aa16.83■□□□□ 0.28
CLNS1A-201ENST00000263309 SEPT12Q8IYM1 358 aa16.83■□□□□ 0.28
CLNS1A-201ENST00000263309 ABCA3Q99758 1704 aa16.82■□□□□ 0.28
CLNS1A-201ENST00000263309 NFAT5O94916 1531 aa16.82■□□□□ 0.28
CLNS1A-201ENST00000263309 COL5A2P05997 1499 aaPredicted RBP16.82■□□□□ 0.28
CLNS1A-201ENST00000263309 ONECUT3O60422 494 aaPredicted RBP16.82■□□□□ 0.28
CLNS1A-201ENST00000263309 TATP17735 454 aaPredicted RBP16.82■□□□□ 0.28
CLNS1A-201ENST00000263309 SF3B2Q13435 895 aaKnown RBP16.82■□□□□ 0.28
CLNS1A-201ENST00000263309 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
CLNS1A-201ENST00000263309 KRT27Q7Z3Y8 459 aa16.8■□□□□ 0.28
CLNS1A-201ENST00000263309 CAMTA1Q9Y6Y1 1673 aa16.8■□□□□ 0.28
CLNS1A-201ENST00000263309 PLCH1Q4KWH8 1693 aa16.79■□□□□ 0.28
CLNS1A-201ENST00000263309 CCDC125Q86Z20 511 aa16.79■□□□□ 0.28
CLNS1A-201ENST00000263309 CRYBG1Q9Y4K1 1723 aa16.79■□□□□ 0.28
CLNS1A-201ENST00000263309 PPP2R1AP30153 589 aa16.78■□□□□ 0.28
CLNS1A-201ENST00000263309 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
CLNS1A-201ENST00000263309 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.78■□□□□ 0.28
CLNS1A-201ENST00000263309 U2SURPO15042 1029 aaKnown RBP16.77■□□□□ 0.28
CLNS1A-201ENST00000263309 MYBBP1AQ9BQG0 1328 aaKnown RBP16.76■□□□□ 0.27
CLNS1A-201ENST00000263309 FAM196AQ6ZSG2 479 aa16.76■□□□□ 0.27
CLNS1A-201ENST00000263309 EIF4A2Q14240 407 aaKnown RBP16.75■□□□□ 0.27
CLNS1A-201ENST00000263309 AMOTQ4VCS5 1084 aa16.75■□□□□ 0.27
CLNS1A-201ENST00000263309 PLEKHO1Q53GL0 409 aaPredicted RBP16.75■□□□□ 0.27
CLNS1A-201ENST00000263309 NBPF6Q5VWK0 638 aa16.75■□□□□ 0.27
CLNS1A-201ENST00000263309 NBPF4Q96M43 638 aa16.75■□□□□ 0.27
CLNS1A-201ENST00000263309 ANKRD26Q9UPS8 1709 aa16.74■□□□□ 0.27
CLNS1A-201ENST00000263309 HMGB2P26583 209 aaKnown RBP16.74■□□□□ 0.27
CLNS1A-201ENST00000263309 ZCRB1Q8TBF4 217 aaKnown RBP16.74■□□□□ 0.27
CLNS1A-201ENST00000263309 LTN1O94822 1766 aa16.74■□□□□ 0.27
CLNS1A-201ENST00000263309 WDR43Q15061 677 aaKnown RBP eCLIP16.73■□□□□ 0.27
CLNS1A-201ENST00000263309 EYA1Q99502 592 aa16.73■□□□□ 0.27
CLNS1A-201ENST00000263309 LMO7Q8WWI1 1683 aa16.72■□□□□ 0.27
CLNS1A-201ENST00000263309 DDX54Q8TDD1 881 aaKnown RBP16.72■□□□□ 0.27
CLNS1A-201ENST00000263309 GLI3P10071 1580 aa16.72■□□□□ 0.27
CLNS1A-201ENST00000263309 HSP90AB1P08238 724 aaKnown RBP16.71■□□□□ 0.27
CLNS1A-201ENST00000263309 U2AF1L5P0DN76 240 aaPredicted RBP16.71■□□□□ 0.27
CLNS1A-201ENST00000263309 U2AF1Q01081 240 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLNS1A-201ENST00000263309 SULT6B1Q6IMI4 303 aa16.71■□□□□ 0.27
CLNS1A-201ENST00000263309 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
CLNS1A-201ENST00000263309 PRKRIP1Q9H875 184 aaPredicted RBP16.71■□□□□ 0.27
CLNS1A-201ENST00000263309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.71■□□□□ 0.274e-8■■■□□ 18.4
CLNS1A-201ENST00000263309 PARD3Q8TEW0 1356 aa16.7■□□□□ 0.26
CLNS1A-201ENST00000263309 IL13P35225 146 aa16.7■□□□□ 0.26
CLNS1A-201ENST00000263309 C1orf141Q5JVX7 400 aa16.7■□□□□ 0.26
CLNS1A-201ENST00000263309 USHBP1Q8N6Y0 703 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms