RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 ARHGEF25Q86VW2 580 aa30.11■■■□□ 2.41
UFD1-201ENST00000263202 PHLPP1O60346 1717 aa30.1■■■□□ 2.41
UFD1-201ENST00000263202 CERKQ8TCT0 537 aa30.1■■■□□ 2.41
UFD1-201ENST00000263202 CABLES1Q8TDN4 633 aa30.1■■■□□ 2.41
UFD1-201ENST00000263202 IP6K1Q92551 441 aa30.09■■■□□ 2.41
UFD1-201ENST00000263202 RUNDC1Q96C34 613 aa30.08■■■□□ 2.41
UFD1-201ENST00000263202 UBAP1LF5GYI3 381 aa30.08■■■□□ 2.41
UFD1-201ENST00000263202 PIP4K2BP78356 416 aa30.06■■■□□ 2.4
UFD1-201ENST00000263202 RGPD5Q99666 1765 aa30.05■■■□□ 2.4
UFD1-201ENST00000263202 COL16A1Q07092 1604 aaPredicted RBP30.05■■■□□ 2.4
UFD1-201ENST00000263202 ZBTB7CA1YPR0 619 aa30.05■■■□□ 2.4
UFD1-201ENST00000263202 APAF1O14727 1248 aa30.05■■■□□ 2.4
UFD1-201ENST00000263202 LRRC59Q96AG4 307 aaKnown RBP30.05■■■□□ 2.4
UFD1-201ENST00000263202 PLEKHF1Q96S99 279 aa30.05■■■□□ 2.4
UFD1-201ENST00000263202 FCHSD2O94868 740 aa30.04■■■□□ 2.4
UFD1-201ENST00000263202 ZC3H6P61129 1189 aaKnown RBP30.04■■■□□ 2.4
UFD1-201ENST00000263202 COL18A1P39060 1754 aa30.04■■■□□ 2.4
UFD1-201ENST00000263202 RSPH6AQ9H0K4 717 aa30.03■■■□□ 2.4
UFD1-201ENST00000263202 SALL2Q9Y467 1007 aaPredicted RBP30.03■■■□□ 2.4
UFD1-201ENST00000263202 PNNQ9H307 717 aaKnown RBP30.02■■■□□ 2.4
UFD1-201ENST00000263202 COL22A1Q8NFW1 1626 aaPredicted RBP30.02■■■□□ 2.4
UFD1-201ENST00000263202 HMOX1P09601 288 aa30.01■■■□□ 2.4
UFD1-201ENST00000263202 CPDO75976 1380 aa30■■■□□ 2.39
UFD1-201ENST00000263202 TCP11L2Q8N4U5 519 aa29.99■■■□□ 2.39
UFD1-201ENST00000263202 ABCC6O95255 1503 aa29.99■■■□□ 2.39
UFD1-201ENST00000263202 RGPD2P0DJD1 1756 aa29.98■■■□□ 2.39
UFD1-201ENST00000263202 PRKAR2BP31323 418 aa29.98■■■□□ 2.39
UFD1-201ENST00000263202 LTV1Q96GA3 475 aaPredicted RBP29.97■■■□□ 2.39
UFD1-201ENST00000263202 IGSF1Q8N6C5 1336 aa29.97■■■□□ 2.39
UFD1-201ENST00000263202 KIAA0232Q92628 1395 aa29.97■■■□□ 2.39
UFD1-201ENST00000263202 EYA1Q99502 592 aa29.96■■■□□ 2.39
UFD1-201ENST00000263202 AXIN2Q9Y2T1 843 aa29.96■■■□□ 2.39
UFD1-201ENST00000263202 SULT6B1Q6IMI4 303 aa29.96■■■□□ 2.39
UFD1-201ENST00000263202 NGEFQ8N5V2 710 aa29.96■■■□□ 2.39
UFD1-201ENST00000263202 MAPK8IP3Q9UPT6 1336 aa29.95■■■□□ 2.38
UFD1-201ENST00000263202 AEBP1Q8IUX7 1158 aa29.94■■■□□ 2.38
UFD1-201ENST00000263202 HAP1P54257 671 aaPredicted RBP29.93■■■□□ 2.38
UFD1-201ENST00000263202 KDRP35968 1356 aa29.92■■■□□ 2.38
UFD1-201ENST00000263202 ZNF521Q96K83 1311 aa29.92■■■□□ 2.38
UFD1-201ENST00000263202 CHRNA2Q15822 529 aa29.91■■■□□ 2.38
UFD1-201ENST00000263202 ANKRD24Q8TF21 1146 aa29.91■■■□□ 2.38
UFD1-201ENST00000263202 RRP7AQ9Y3A4 280 aaKnown RBP29.91■■■□□ 2.38
UFD1-201ENST00000263202 LMO7Q8WWI1 1683 aa29.9■■■□□ 2.38
UFD1-201ENST00000263202 CAMTA1Q9Y6Y1 1673 aa29.9■■■□□ 2.38
UFD1-201ENST00000263202 PHACTR3Q96KR7 559 aa29.9■■■□□ 2.38
UFD1-201ENST00000263202 NEFMP07197 916 aa29.89■■■□□ 2.38
UFD1-201ENST00000263202 NCBP3Q53F19 620 aaKnown RBP29.89■■■□□ 2.38
UFD1-201ENST00000263202 TMPOP42166 694 aaKnown RBP29.89■■■□□ 2.38
UFD1-201ENST00000263202 NEUROD2Q15784 382 aa29.89■■■□□ 2.38
UFD1-201ENST00000263202 PDE3BQ13370 1112 aa29.88■■■□□ 2.37
UFD1-201ENST00000263202 PRDM11Q9NQV5 511 aa29.87■■■□□ 2.37
UFD1-201ENST00000263202 FAM208AQ9UK61 1670 aaKnown RBP29.87■■■□□ 2.37
UFD1-201ENST00000263202 DLG5Q8TDM6 1919 aa29.87■■■□□ 2.37
UFD1-201ENST00000263202 ERBB3P21860 1342 aa29.87■■■□□ 2.37
UFD1-201ENST00000263202 NBPF6Q5VWK0 638 aa29.87■■■□□ 2.37
UFD1-201ENST00000263202 NBPF4Q96M43 638 aa29.87■■■□□ 2.37
UFD1-201ENST00000263202 PHF23Q9BUL5 403 aaPredicted RBP29.87■■■□□ 2.37
UFD1-201ENST00000263202 CCDC27Q2M243 656 aa29.85■■■□□ 2.37
UFD1-201ENST00000263202 WWC1Q8IX03 1113 aa29.85■■■□□ 2.37
UFD1-201ENST00000263202 NCAPD2Q15021 1401 aa29.84■■■□□ 2.37
UFD1-201ENST00000263202 NFE2L2Q16236 605 aa29.82■■■□□ 2.36
UFD1-201ENST00000263202 USHBP1Q8N6Y0 703 aa29.82■■■□□ 2.36
UFD1-201ENST00000263202 CDCA7LQ96GN5 454 aa29.82■■■□□ 2.36
UFD1-201ENST00000263202 RIPK4P57078 832 aa29.81■■■□□ 2.36
UFD1-201ENST00000263202 COL14A1Q05707 1796 aaKnown RBP29.8■■■□□ 2.36
UFD1-201ENST00000263202 GOLGA2Q08379 1002 aa29.8■■■□□ 2.36
UFD1-201ENST00000263202 TRIM35Q9UPQ4 493 aa29.8■■■□□ 2.36
UFD1-201ENST00000263202 FAM83GA6ND36 823 aa29.79■■■□□ 2.36
UFD1-201ENST00000263202 COL5A2P05997 1499 aaPredicted RBP29.77■■■□□ 2.36
UFD1-201ENST00000263202 WDR63Q8IWG1 891 aa29.75■■■□□ 2.35
UFD1-201ENST00000263202 CSB-PGBD3P0DP91 1061 aa29.74■■■□□ 2.35
UFD1-201ENST00000263202 JCADQ9P266 1359 aa29.74■■■□□ 2.35
UFD1-201ENST00000263202 SLFN5Q08AF3 891 aa29.73■■■□□ 2.35
UFD1-201ENST00000263202 NLRP2Q9NX02 1062 aa29.73■■■□□ 2.35
UFD1-201ENST00000263202 SPINK5Q9NQ38 1064 aaPredicted RBP29.73■■■□□ 2.35
UFD1-201ENST00000263202 MTHFSDQ2M296 383 aaKnown RBP29.72■■■□□ 2.35
UFD1-201ENST00000263202 WDR17Q8IZU2 1322 aa29.71■■■□□ 2.35
UFD1-201ENST00000263202 PLCH1Q4KWH8 1693 aa29.71■■■□□ 2.35
UFD1-201ENST00000263202 TRMT2AQ8IZ69 625 aaKnown RBP29.71■■■□□ 2.35
UFD1-201ENST00000263202 E9PSI1 815 aa29.69■■■□□ 2.34
UFD1-201ENST00000263202 LMOD3Q0VAK6 560 aa29.68■■■□□ 2.34
UFD1-201ENST00000263202 DUSP27Q5VZP5 1158 aa29.68■■■□□ 2.34
UFD1-201ENST00000263202 GAS2L2Q8NHY3 880 aa29.68■■■□□ 2.34
UFD1-201ENST00000263202 NUTM2BA6NNL0 878 aaPredicted RBP29.67■■■□□ 2.34
UFD1-201ENST00000263202 NUTM2EB1AL46 878 aaPredicted RBP29.67■■■□□ 2.34
UFD1-201ENST00000263202 NUTM2AQ8IVF1 878 aaPredicted RBP29.67■■■□□ 2.34
UFD1-201ENST00000263202 BTG4Q9NY30 223 aa29.67■■■□□ 2.34
UFD1-201ENST00000263202 ADAMTS2O95450 1211 aa29.66■■■□□ 2.34
UFD1-201ENST00000263202 HSPA1LP34931 641 aa29.66■■■□□ 2.34
UFD1-201ENST00000263202 EVA1CP58658 441 aa29.65■■■□□ 2.34
UFD1-201ENST00000263202 STRN4Q9NRL3 753 aa29.65■■■□□ 2.34
UFD1-201ENST00000263202 TOM1L2Q6ZVM7 507 aa29.64■■■□□ 2.34
UFD1-201ENST00000263202 IL16Q14005 1332 aa29.64■■■□□ 2.34
UFD1-201ENST00000263202 NRAPQ86VF7 1730 aa29.63■■■□□ 2.33
UFD1-201ENST00000263202 LARP1Q6PKG0 1096 aaKnown RBP29.62■■■□□ 2.33
UFD1-201ENST00000263202 THUMPD2Q9BTF0 503 aaKnown RBP29.61■■■□□ 2.33
UFD1-201ENST00000263202 NWD2Q9ULI1 1742 aa29.61■■■□□ 2.33
UFD1-201ENST00000263202 MEGF6O75095 1541 aa29.61■■■□□ 2.33
UFD1-201ENST00000263202 PLEKHO1Q53GL0 409 aaPredicted RBP29.61■■■□□ 2.33
UFD1-201ENST00000263202 RAPGEF4Q8WZA2 1011 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms