RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CPSF1Q10570 1443 aaKnown RBP17.26■□□□□ 0.35
TRAF4-202ENST00000262396 OVOS2Q6IE36 1432 aa17.26■□□□□ 0.35
TRAF4-202ENST00000262396 SLIT3O75094 1523 aa17.26■□□□□ 0.35
TRAF4-202ENST00000262396 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
TRAF4-202ENST00000262396 EXOC5O00471 708 aa17.25■□□□□ 0.35
TRAF4-202ENST00000262396 AXIN2Q9Y2T1 843 aa17.25■□□□□ 0.35
TRAF4-202ENST00000262396 CARD10Q9BWT7 1032 aa17.24■□□□□ 0.35
TRAF4-202ENST00000262396 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
TRAF4-202ENST00000262396 PPP1R1BQ9UD71 204 aaPredicted RBP17.24■□□□□ 0.35
TRAF4-202ENST00000262396 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
TRAF4-202ENST00000262396 PIK3C2AO00443 1686 aa17.23■□□□□ 0.35
TRAF4-202ENST00000262396 TNS1Q9HBL0 1735 aaKnown RBP17.22■□□□□ 0.35
TRAF4-202ENST00000262396 NME9Q86XW9 330 aa17.22■□□□□ 0.35
TRAF4-202ENST00000262396 SLC12A5Q9H2X9 1139 aa17.22■□□□□ 0.35
TRAF4-202ENST00000262396 SBNO2Q9Y2G9 1366 aa17.22■□□□□ 0.35
TRAF4-202ENST00000262396 TRIM26Q12899 539 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-202ENST00000262396 BCL11BQ9C0K0 894 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-202ENST00000262396 CCDC7Q96M83 1385 aa17.2■□□□□ 0.34
TRAF4-202ENST00000262396 LRP5O75197 1615 aa17.19■□□□□ 0.34
TRAF4-202ENST00000262396 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
TRAF4-202ENST00000262396 MARCH10Q8NA82 808 aaPredicted RBP17.18■□□□□ 0.34
TRAF4-202ENST00000262396 PARP4Q9UKK3 1724 aaKnown RBP17.18■□□□□ 0.34
TRAF4-202ENST00000262396 AKAP12Q02952 1782 aa17.17■□□□□ 0.34
TRAF4-202ENST00000262396 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
TRAF4-202ENST00000262396 ANKRD24Q8TF21 1146 aa17.17■□□□□ 0.34
TRAF4-202ENST00000262396 SPON1Q9HCB6 807 aa17.17■□□□□ 0.34
TRAF4-202ENST00000262396 EDC4Q6P2E9 1401 aaKnown RBP17.16■□□□□ 0.34
TRAF4-202ENST00000262396 PLSCR1O15162 318 aa17.16■□□□□ 0.34
TRAF4-202ENST00000262396 LTV1Q96GA3 475 aaPredicted RBP17.16■□□□□ 0.34
TRAF4-202ENST00000262396 COG3Q96JB2 828 aa17.16■□□□□ 0.34
TRAF4-202ENST00000262396 PUS7Q96PZ0 661 aaKnown RBP17.16■□□□□ 0.34
TRAF4-202ENST00000262396 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
TRAF4-202ENST00000262396 IL2RBP14784 551 aa17.15■□□□□ 0.34
TRAF4-202ENST00000262396 AMPHP49418 695 aa17.14■□□□□ 0.33
TRAF4-202ENST00000262396 ACSBG1Q96GR2 724 aa17.14■□□□□ 0.33
TRAF4-202ENST00000262396 STK32BQ9NY57 414 aa17.14■□□□□ 0.33
TRAF4-202ENST00000262396 ERBB3P21860 1342 aa17.14■□□□□ 0.33
TRAF4-202ENST00000262396 A0A1W2PP64 1363 aa17.14■□□□□ 0.33
TRAF4-202ENST00000262396 LRRC37A3O60309 1634 aa17.14■□□□□ 0.33
TRAF4-202ENST00000262396 KCNQ2O43526 872 aa17.13■□□□□ 0.33
TRAF4-202ENST00000262396 TMF1P82094 1093 aa17.13■□□□□ 0.33
TRAF4-202ENST00000262396 NINLQ9Y2I6 1382 aa17.13■□□□□ 0.33
TRAF4-202ENST00000262396 NFAT5O94916 1531 aa17.12■□□□□ 0.33
TRAF4-202ENST00000262396 COL18A1P39060 1754 aa17.12■□□□□ 0.33
TRAF4-202ENST00000262396 MON2Q7Z3U7 1717 aa17.11■□□□□ 0.33
TRAF4-202ENST00000262396 CDCA8Q53HL2 280 aa17.1■□□□□ 0.33
TRAF4-202ENST00000262396 PTF1AQ7RTS3 328 aa17.1■□□□□ 0.33
TRAF4-202ENST00000262396 DDX54Q8TDD1 881 aaKnown RBP17.1■□□□□ 0.33
TRAF4-202ENST00000262396 ABCC6O95255 1503 aa17.1■□□□□ 0.33
TRAF4-202ENST00000262396 TXNRD1Q16881 649 aa17.09■□□□□ 0.33
TRAF4-202ENST00000262396 IP6K1Q92551 441 aa17.09■□□□□ 0.33
TRAF4-202ENST00000262396 TNS2Q63HR2 1409 aa17.09■□□□□ 0.33
TRAF4-202ENST00000262396 CD163L1Q9NR16 1453 aa17.09■□□□□ 0.33
TRAF4-202ENST00000262396 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
TRAF4-202ENST00000262396 NUP188Q5SRE5 1749 aa17.08■□□□□ 0.32
TRAF4-202ENST00000262396 RREB1Q92766 1687 aa17.08■□□□□ 0.32
TRAF4-202ENST00000262396 SYTL4Q96C24 671 aaPredicted RBP17.07■□□□□ 0.32
TRAF4-202ENST00000262396 TESK2Q96S53 571 aa17.07■□□□□ 0.32
TRAF4-202ENST00000262396 ANO8Q9HCE9 1232 aaPredicted RBP17.07■□□□□ 0.32
TRAF4-202ENST00000262396 BCL9O00512 1426 aa17.06■□□□□ 0.32
TRAF4-202ENST00000262396 USP47Q96K76 1375 aa17.06■□□□□ 0.32
TRAF4-202ENST00000262396 ZBTB7AO95365 584 aa17.06■□□□□ 0.32
TRAF4-202ENST00000262396 PCGF6Q9BYE7 350 aa17.06■□□□□ 0.32
TRAF4-202ENST00000262396 PEAK1Q9H792 1746 aa17.05■□□□□ 0.32
TRAF4-202ENST00000262396 ANKRD36BQ8N2N9 1353 aa17.04■□□□□ 0.32
TRAF4-202ENST00000262396 MAP3K19Q56UN5 1328 aa17.04■□□□□ 0.32
TRAF4-202ENST00000262396 SLC15A2Q16348 729 aa17.04■□□□□ 0.32
TRAF4-202ENST00000262396 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
TRAF4-202ENST00000262396 GGNBP2Q9H3C7 697 aa17.04■□□□□ 0.32
TRAF4-202ENST00000262396 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
TRAF4-202ENST00000262396 WNK3Q9BYP7 1800 aa17.04■□□□□ 0.32
TRAF4-202ENST00000262396 HOXC9P31274 260 aa17.03■□□□□ 0.32
TRAF4-202ENST00000262396 PROM2Q8N271 834 aa17.03■□□□□ 0.32
TRAF4-202ENST00000262396 LTN1O94822 1766 aa17.02■□□□□ 0.32
TRAF4-202ENST00000262396 SMG6Q86US8 1419 aaKnown RBP17.02■□□□□ 0.31
TRAF4-202ENST00000262396 SBF2Q86WG5 1849 aa17.01■□□□□ 0.31
TRAF4-202ENST00000262396 FBLN1P23142 703 aa17.01■□□□□ 0.31
TRAF4-202ENST00000262396 RRS1Q15050 365 aaKnown RBP17.01■□□□□ 0.31
TRAF4-202ENST00000262396 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
TRAF4-202ENST00000262396 RGPD3A6NKT7 1758 aaPredicted RBP17■□□□□ 0.31
TRAF4-202ENST00000262396 RGPD4Q7Z3J3 1758 aa17■□□□□ 0.31
TRAF4-202ENST00000262396 YY1P25490 414 aa17■□□□□ 0.31
TRAF4-202ENST00000262396 ZCRB1Q8TBF4 217 aaKnown RBP17■□□□□ 0.31
TRAF4-202ENST00000262396 USP54Q70EL1 1684 aa16.99■□□□□ 0.31
TRAF4-202ENST00000262396 KAT6BQ8WYB5 2073 aa16.98■□□□□ 0.31
TRAF4-202ENST00000262396 FYB1O15117 783 aa16.98■□□□□ 0.31
TRAF4-202ENST00000262396 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
TRAF4-202ENST00000262396 TATP17735 454 aaPredicted RBP16.98■□□□□ 0.31
TRAF4-202ENST00000262396 MTFR1LQ9H019 292 aa16.98■□□□□ 0.31
TRAF4-202ENST00000262396 PDGFDQ9GZP0 370 aaPredicted RBP16.97■□□□□ 0.31
TRAF4-202ENST00000262396 PRIM1P49642 420 aaKnown RBP16.96■□□□□ 0.31
TRAF4-202ENST00000262396 SLC27A3Q5K4L6 730 aa16.96■□□□□ 0.31
TRAF4-202ENST00000262396 USHBP1Q8N6Y0 703 aa16.96■□□□□ 0.31
TRAF4-202ENST00000262396 TIMELESSQ9UNS1 1208 aa16.96■□□□□ 0.31
TRAF4-202ENST00000262396 RTL1A6NKG5 1358 aa16.96■□□□□ 0.31
TRAF4-202ENST00000262396 MSH5O43196 834 aa16.95■□□□□ 0.3
TRAF4-202ENST00000262396 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
TRAF4-202ENST00000262396 NHSQ6T4R5 1651 aa16.94■□□□□ 0.3
TRAF4-202ENST00000262396 TFCP2L1Q9NZI6 479 aa16.94■□□□□ 0.3
TRAF4-202ENST00000262396 POLD1P28340 1107 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms