RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 CFAP53Q96M91 514 aa23.13■■□□□ 1.29
SSB-201ENST00000260956 GGNBP2Q9H3C7 697 aa23.13■■□□□ 1.29
SSB-201ENST00000260956 NRKQ7Z2Y5 1582 aa23.13■■□□□ 1.29
SSB-201ENST00000260956 TTC21BQ7Z4L5 1316 aa23.13■■□□□ 1.29
SSB-201ENST00000260956 ABTB2Q8N961 1025 aa23.13■■□□□ 1.29
SSB-201ENST00000260956 CCDC27Q2M243 656 aa23.12■■□□□ 1.29
SSB-201ENST00000260956 EDC4Q6P2E9 1401 aaKnown RBP23.11■■□□□ 1.29
SSB-201ENST00000260956 C20orf194Q5TEA3 1177 aa23.11■■□□□ 1.29
SSB-201ENST00000260956 HDGFL2Q7Z4V5 671 aaPredicted RBP23.11■■□□□ 1.29
SSB-201ENST00000260956 CRBNQ96SW2 442 aa23.11■■□□□ 1.29
SSB-201ENST00000260956 ZRANB1Q9UGI0 708 aa23.11■■□□□ 1.29
SSB-201ENST00000260956 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.1■■□□□ 1.29
SSB-201ENST00000260956 TCP11L2Q8N4U5 519 aa23.1■■□□□ 1.29
SSB-201ENST00000260956 FANCIQ9NVI1 1328 aa23.08■■□□□ 1.29
SSB-201ENST00000260956 C8orf37Q96NL8 207 aa23.08■■□□□ 1.28
SSB-201ENST00000260956 MEX3CQ5U5Q3 659 aaKnown RBP23.07■■□□□ 1.28
SSB-201ENST00000260956 NME9Q86XW9 330 aa23.07■■□□□ 1.28
SSB-201ENST00000260956 PLEKHF1Q96S99 279 aa23.07■■□□□ 1.28
SSB-201ENST00000260956 PIK3C2AO00443 1686 aa23.07■■□□□ 1.28
SSB-201ENST00000260956 ABCA3Q99758 1704 aa23.05■■□□□ 1.28
SSB-201ENST00000260956 CRYBG1Q9Y4K1 1723 aa23.05■■□□□ 1.28
SSB-201ENST00000260956 NLRP6P59044 892 aa23.05■■□□□ 1.28
SSB-201ENST00000260956 USP19O94966 1318 aa23.05■■□□□ 1.28
SSB-201ENST00000260956 WDR63Q8IWG1 891 aa23.05■■□□□ 1.28
SSB-201ENST00000260956 MAP2P11137 1827 aaKnown RBP23.04■■□□□ 1.28
SSB-201ENST00000260956 FAM83GA6ND36 823 aa23.03■■□□□ 1.28
SSB-201ENST00000260956 TTC21AQ8NDW8 1320 aa23.03■■□□□ 1.28
SSB-201ENST00000260956 CDK12Q9NYV4 1490 aaPredicted RBP23.03■■□□□ 1.28
SSB-201ENST00000260956 HAP1P54257 671 aaPredicted RBP23.02■■□□□ 1.28
SSB-201ENST00000260956 NGLY1Q96IV0 654 aa23.02■■□□□ 1.28
SSB-201ENST00000260956 RRP7AQ9Y3A4 280 aaKnown RBP23.02■■□□□ 1.28
SSB-201ENST00000260956 AFF2P51816 1311 aa23.02■■□□□ 1.27
SSB-201ENST00000260956 KDM2BQ8NHM5 1336 aa23.02■■□□□ 1.27
SSB-201ENST00000260956 GCP02774 474 aa23.01■■□□□ 1.27
SSB-201ENST00000260956 POTEAQ6S8J7 498 aa23.01■■□□□ 1.27
SSB-201ENST00000260956 MARF1Q9Y4F3 1742 aaKnown RBP23.01■■□□□ 1.27
SSB-201ENST00000260956 U2AF1L5P0DN76 240 aaPredicted RBP23■■□□□ 1.27
SSB-201ENST00000260956 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
SSB-201ENST00000260956 U2AF1Q01081 240 aaKnown RBP eCLIP23■■□□□ 1.273e-12■□□□□ 10
SSB-201ENST00000260956 AATKQ6ZMQ8 1374 aa23■■□□□ 1.27
SSB-201ENST00000260956 FNBP4Q8N3X1 1017 aaPredicted RBP22.99■■□□□ 1.27
SSB-201ENST00000260956 PHRF1Q9P1Y6 1649 aaKnown RBP22.98■■□□□ 1.27
SSB-201ENST00000260956 KIAA0232Q92628 1395 aa22.98■■□□□ 1.27
SSB-201ENST00000260956 USP31Q70CQ4 1352 aa22.97■■□□□ 1.27
SSB-201ENST00000260956 CHRNA2Q15822 529 aa22.97■■□□□ 1.27
SSB-201ENST00000260956 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.97■■□□□ 1.27
SSB-201ENST00000260956 POLKQ9UBT6 870 aa22.97■■□□□ 1.27
SSB-201ENST00000260956 BCL9LQ86UU0 1499 aa22.97■■□□□ 1.27
SSB-201ENST00000260956 SOX12O15370 315 aa22.96■■□□□ 1.27
SSB-201ENST00000260956 BCAR3O75815 825 aa22.96■■□□□ 1.27
SSB-201ENST00000260956 SLIT3O75094 1523 aa22.96■■□□□ 1.27
SSB-201ENST00000260956 SLIT2O94813 1529 aa22.94■■□□□ 1.26
SSB-201ENST00000260956 FBLN1P23142 703 aa22.94■■□□□ 1.26
SSB-201ENST00000260956 OVOS2A0A0J9YW53 1432 aa22.94■■□□□ 1.26
SSB-201ENST00000260956 OVOS2Q6IE36 1432 aa22.94■■□□□ 1.26
SSB-201ENST00000260956 ILDR2Q71H61 639 aa22.94■■□□□ 1.26
SSB-201ENST00000260956 USP21Q9UK80 565 aa22.94■■□□□ 1.26
SSB-201ENST00000260956 TRIM35Q9UPQ4 493 aa22.94■■□□□ 1.26
SSB-201ENST00000260956 MSH5O43196 834 aa22.93■■□□□ 1.26
SSB-201ENST00000260956 DIAPH1O60610 1272 aaKnown RBP22.93■■□□□ 1.26
SSB-201ENST00000260956 TMPOP42166 694 aaKnown RBP22.93■■□□□ 1.26
SSB-201ENST00000260956 PRDM11Q9NQV5 511 aa22.93■■□□□ 1.26
SSB-201ENST00000260956 NEUROD2Q15784 382 aa22.92■■□□□ 1.26
SSB-201ENST00000260956 RARSP54136 660 aaKnown RBP22.91■■□□□ 1.26
SSB-201ENST00000260956 CPDO75976 1380 aa22.91■■□□□ 1.26
SSB-201ENST00000260956 NFAT5O94916 1531 aa22.91■■□□□ 1.26
SSB-201ENST00000260956 PDE3AQ14432 1141 aa22.91■■□□□ 1.26
SSB-201ENST00000260956 BTG4Q9NY30 223 aa22.91■■□□□ 1.26
SSB-201ENST00000260956 TCERG1O14776 1098 aaKnown RBP22.9■■□□□ 1.26
SSB-201ENST00000260956 ZNF772Q68DY9 489 aaPredicted RBP22.9■■□□□ 1.26
SSB-201ENST00000260956 IL16Q14005 1332 aa22.89■■□□□ 1.26
SSB-201ENST00000260956 U2SURPO15042 1029 aaKnown RBP22.89■■□□□ 1.26
SSB-201ENST00000260956 ARHGEF25Q86VW2 580 aa22.89■■□□□ 1.26
SSB-201ENST00000260956 RSPH6AQ9H0K4 717 aa22.89■■□□□ 1.26
SSB-201ENST00000260956 QTRT2Q9H974 415 aaKnown RBP22.89■■□□□ 1.26
SSB-201ENST00000260956 USP54Q70EL1 1684 aa22.89■■□□□ 1.25
SSB-201ENST00000260956 AXIN2Q9Y2T1 843 aa22.88■■□□□ 1.25
SSB-201ENST00000260956 UNC5CLQ8IV45 518 aa22.88■■□□□ 1.25
SSB-201ENST00000260956 PEAK1Q9H792 1746 aa22.87■■□□□ 1.25
SSB-201ENST00000260956 ZBTB7CA1YPR0 619 aa22.87■■□□□ 1.25
SSB-201ENST00000260956 RGPD1P0DJD0 1748 aa22.87■■□□□ 1.25
SSB-201ENST00000260956 MS4A1P11836 297 aa22.87■■□□□ 1.25
SSB-201ENST00000260956 KCNH5Q8NCM2 988 aa22.87■■□□□ 1.25
SSB-201ENST00000260956 COG3Q96JB2 828 aa22.87■■□□□ 1.25
SSB-201ENST00000260956 PLCH1Q4KWH8 1693 aa22.86■■□□□ 1.25
SSB-201ENST00000260956 CAMTA1Q9Y6Y1 1673 aa22.86■■□□□ 1.25
SSB-201ENST00000260956 FCHSD2O94868 740 aa22.86■■□□□ 1.25
SSB-201ENST00000260956 MYH16Q9H6N6 1097 aa22.86■■□□□ 1.25
SSB-201ENST00000260956 EMILIN1Q9Y6C2 1016 aa22.86■■□□□ 1.25
SSB-201ENST00000260956 IL13P35225 146 aa22.85■■□□□ 1.25
SSB-201ENST00000260956 ATRNO75882 1429 aa22.85■■□□□ 1.25
SSB-201ENST00000260956 CENPQQ7L2Z9 268 aaPredicted RBP22.85■■□□□ 1.25
SSB-201ENST00000260956 COL14A1Q05707 1796 aaKnown RBP22.85■■□□□ 1.25
SSB-201ENST00000260956 CT47B1P0C2W7 299 aaPredicted RBP22.84■■□□□ 1.25
SSB-201ENST00000260956 LMO7Q8WWI1 1683 aa22.83■■□□□ 1.25
SSB-201ENST00000260956 MAPK8IP3Q9UPT6 1336 aa22.83■■□□□ 1.25
SSB-201ENST00000260956 DLG5Q8TDM6 1919 aa22.83■■□□□ 1.24
SSB-201ENST00000260956 TRPC5Q9UL62 973 aaPredicted RBP22.82■■□□□ 1.24
SSB-201ENST00000260956 COL18A1P39060 1754 aa22.82■■□□□ 1.24
SSB-201ENST00000260956 NRAPQ86VF7 1730 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms