RNA–Protein interactions for RNA: ENST00000256001.12

ACTR3B-201, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3B, Length 2,216 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-201ENST00000256001 PCDHB15Q9Y5E8 787 aa32.9■■■□□ 2.86
ACTR3B-201ENST00000256001 CALD1Q05682 793 aaKnown RBP32.9■■■□□ 2.86
ACTR3B-201ENST00000256001 TRIM27P14373 513 aa32.88■■■□□ 2.85
ACTR3B-201ENST00000256001 CEP170BQ9Y4F5 1589 aaPredicted RBP32.88■■■□□ 2.85
ACTR3B-201ENST00000256001 SSH2Q76I76 1423 aa32.88■■■□□ 2.85
ACTR3B-201ENST00000256001 PAK3O75914 559 aaPredicted RBP32.87■■■□□ 2.85
ACTR3B-201ENST00000256001 EIF4A2Q14240 407 aaKnown RBP32.87■■■□□ 2.85
ACTR3B-201ENST00000256001 NOB1Q9ULX3 412 aaKnown RBP32.87■■■□□ 2.85
ACTR3B-201ENST00000256001 FAM161AQ3B820 660 aa32.87■■■□□ 2.85
ACTR3B-201ENST00000256001 NGDNQ8NEJ9 315 aaKnown RBP32.87■■■□□ 2.85
ACTR3B-201ENST00000256001 KCNA6P17658 529 aa32.86■■■□□ 2.85
ACTR3B-201ENST00000256001 ATF7IPQ6VMQ6 1270 aa32.86■■■□□ 2.85
ACTR3B-201ENST00000256001 ZBTB47Q9UFB7 747 aaPredicted RBP32.86■■■□□ 2.85
ACTR3B-201ENST00000256001 XRN1Q8IZH2 1706 aaKnown RBP32.85■■■□□ 2.85
ACTR3B-201ENST00000256001 SOX12O15370 315 aa32.85■■■□□ 2.85
ACTR3B-201ENST00000256001 TTC21AQ8NDW8 1320 aa32.84■■■□□ 2.85
ACTR3B-201ENST00000256001 USP31Q70CQ4 1352 aa32.84■■■□□ 2.85
ACTR3B-201ENST00000256001 GNAI1P63096 354 aa32.83■■■□□ 2.85
ACTR3B-201ENST00000256001 LMOD3Q0VAK6 560 aa32.83■■■□□ 2.85
ACTR3B-201ENST00000256001 ALDH1L2Q3SY69 923 aa32.83■■■□□ 2.85
ACTR3B-201ENST00000256001 IFT57Q9NWB7 429 aa32.83■■■□□ 2.85
ACTR3B-201ENST00000256001 C8orf34Q49A92 452 aa32.82■■■□□ 2.85
ACTR3B-201ENST00000256001 RIMS1Q86UR5 1692 aaKnown RBP32.82■■■□□ 2.85
ACTR3B-201ENST00000256001 KIF16BQ96L93 1317 aa32.82■■■□□ 2.84
ACTR3B-201ENST00000256001 SULT6B1Q6IMI4 303 aa32.82■■■□□ 2.84
ACTR3B-201ENST00000256001 NALCNQ8IZF0 1738 aa32.82■■■□□ 2.84
ACTR3B-201ENST00000256001 RGPD8O14715 1765 aaPredicted RBP32.81■■■□□ 2.84
ACTR3B-201ENST00000256001 HSP90AB2PQ58FF8 381 aa32.81■■■□□ 2.84
ACTR3B-201ENST00000256001 AEBP1Q8IUX7 1158 aa32.81■■■□□ 2.84
ACTR3B-201ENST00000256001 PIK3R4Q99570 1358 aa32.8■■■□□ 2.84
ACTR3B-201ENST00000256001 IPO8O15397 1037 aaKnown RBP32.79■■■□□ 2.84
ACTR3B-201ENST00000256001 RWDD1Q9H446 243 aaPredicted RBP32.79■■■□□ 2.84
ACTR3B-201ENST00000256001 ITPRIPQ8IWB1 547 aa32.79■■■□□ 2.84
ACTR3B-201ENST00000256001 ZNF853P0CG23 659 aa32.78■■■□□ 2.84
ACTR3B-201ENST00000256001 ZNF428Q96B54 188 aa32.78■■■□□ 2.84
ACTR3B-201ENST00000256001 DLG5Q8TDM6 1919 aa32.78■■■□□ 2.84
ACTR3B-201ENST00000256001 FAM83GA6ND36 823 aa32.78■■■□□ 2.84
ACTR3B-201ENST00000256001 MBIPQ9NS73 344 aa32.78■■■□□ 2.84
ACTR3B-201ENST00000256001 DDX19BQ9UMR2 479 aa32.77■■■□□ 2.84
ACTR3B-201ENST00000256001 PEAK1Q9H792 1746 aa32.77■■■□□ 2.84
ACTR3B-201ENST00000256001 ANKLE2Q86XL3 938 aa32.75■■■□□ 2.83
ACTR3B-201ENST00000256001 CFAP44Q96MT7 982 aa32.75■■■□□ 2.83
ACTR3B-201ENST00000256001 VAMP4O75379 141 aa32.75■■■□□ 2.83
ACTR3B-201ENST00000256001 DCTN1Q14203 1278 aa32.74■■■□□ 2.83
ACTR3B-201ENST00000256001 TMEM57Q8N5G2 664 aa32.74■■■□□ 2.83
ACTR3B-201ENST00000256001 TSPYL6Q8N831 410 aa32.74■■■□□ 2.83
ACTR3B-201ENST00000256001 MAP3K19Q56UN5 1328 aa32.74■■■□□ 2.83
ACTR3B-201ENST00000256001 ANKARQ7Z5J8 1434 aa32.74■■■□□ 2.83
ACTR3B-201ENST00000256001 ELL2O00472 640 aaPredicted RBP32.71■■■□□ 2.83
ACTR3B-201ENST00000256001 BRPF1P55201 1214 aaPredicted RBP32.71■■■□□ 2.83
ACTR3B-201ENST00000256001 PDZRN3Q9UPQ7 1066 aa32.69■■■□□ 2.82
ACTR3B-201ENST00000256001 NLRP6P59044 892 aa32.67■■■□□ 2.82
ACTR3B-201ENST00000256001 TWISTNBQ3B726 338 aaPredicted RBP32.67■■■□□ 2.82
ACTR3B-201ENST00000256001 MRPL50Q8N5N7 158 aaKnown RBP32.67■■■□□ 2.82
ACTR3B-201ENST00000256001 SBNO1A3KN83 1393 aa32.67■■■□□ 2.82
ACTR3B-201ENST00000256001 FLT4P35916 1363 aa32.67■■■□□ 2.82
ACTR3B-201ENST00000256001 FMN2Q9NZ56 1722 aa32.66■■■□□ 2.82
ACTR3B-201ENST00000256001 PIK3C2AO00443 1686 aa32.66■■■□□ 2.82
ACTR3B-201ENST00000256001 RGPD1P0DJD0 1748 aa32.66■■■□□ 2.82
ACTR3B-201ENST00000256001 AMPHP49418 695 aa32.66■■■□□ 2.82
ACTR3B-201ENST00000256001 C8orf58Q8NAV2 365 aa32.66■■■□□ 2.82
ACTR3B-201ENST00000256001 ZBTB40Q9NUA8 1239 aa32.64■■■□□ 2.82
ACTR3B-201ENST00000256001 NUTM2GQ5VZR2 741 aa32.63■■■□□ 2.81
ACTR3B-201ENST00000256001 DDRGK1Q96HY6 314 aa32.63■■■□□ 2.81
ACTR3B-201ENST00000256001 ARHGEF10O15013 1369 aa32.63■■■□□ 2.81
ACTR3B-201ENST00000256001 ZNF142P52746 1687 aaPredicted RBP32.62■■■□□ 2.81
ACTR3B-201ENST00000256001 HDAC1Q13547 482 aaPredicted RBP32.62■■■□□ 2.81
ACTR3B-201ENST00000256001 CHD2O14647 1828 aaKnown RBP32.61■■■□□ 2.81
ACTR3B-201ENST00000256001 MCM10Q7L590 875 aa32.61■■■□□ 2.81
ACTR3B-201ENST00000256001 ARHGAP45Q92619 1136 aa32.61■■■□□ 2.81
ACTR3B-201ENST00000256001 RBM33Q96EV2 1170 aaKnown RBP32.61■■■□□ 2.81
ACTR3B-201ENST00000256001 ADAMTSL3P82987 1691 aa32.59■■■□□ 2.81
ACTR3B-201ENST00000256001 ABTB2Q8N961 1025 aa32.59■■■□□ 2.81
ACTR3B-201ENST00000256001 EYA1Q99502 592 aa32.56■■■□□ 2.8
ACTR3B-201ENST00000256001 PHF8Q9UPP1 1060 aa32.56■■■□□ 2.8
ACTR3B-201ENST00000256001 CHL1O00533 1208 aa32.55■■■□□ 2.8
ACTR3B-201ENST00000256001 C14orf37Q86TY3 774 aa32.54■■■□□ 2.8
ACTR3B-201ENST00000256001 VIRMAQ69YN4 1812 aaKnown RBP32.53■■■□□ 2.8
ACTR3B-201ENST00000256001 MTHFSDQ2M296 383 aaKnown RBP32.53■■■□□ 2.8
ACTR3B-201ENST00000256001 IGSF1Q8N6C5 1336 aa32.53■■■□□ 2.8
ACTR3B-201ENST00000256001 KDRP35968 1356 aa32.52■■■□□ 2.8
ACTR3B-201ENST00000256001 SETD1BQ9UPS6 1966 aaKnown RBP32.52■■■□□ 2.8
ACTR3B-201ENST00000256001 FOXO3O43524 673 aa32.51■■■□□ 2.8
ACTR3B-201ENST00000256001 HOXC9P31274 260 aa32.51■■■□□ 2.79
ACTR3B-201ENST00000256001 ZBTB7BO15156 539 aaPredicted RBP32.5■■■□□ 2.79
ACTR3B-201ENST00000256001 KRT24Q2M2I5 525 aa32.5■■■□□ 2.79
ACTR3B-201ENST00000256001 SMC5Q8IY18 1101 aa32.5■■■□□ 2.79
ACTR3B-201ENST00000256001 ABCC4O15439 1325 aa32.49■■■□□ 2.79
ACTR3B-201ENST00000256001 NBR1Q14596 966 aa32.49■■■□□ 2.79
ACTR3B-201ENST00000256001 CHMP4BQ9H444 224 aaKnown RBP32.49■■■□□ 2.79
ACTR3B-201ENST00000256001 MARF1Q9Y4F3 1742 aaKnown RBP32.49■■■□□ 2.79
ACTR3B-201ENST00000256001 RTF1Q92541 710 aaKnown RBP32.49■■■□□ 2.79
ACTR3B-201ENST00000256001 API5Q9BZZ5 524 aaKnown RBP32.48■■■□□ 2.79
ACTR3B-201ENST00000256001 KIF24Q5T7B8 1368 aa32.48■■■□□ 2.79
ACTR3B-201ENST00000256001 CRB1P82279 1406 aa32.47■■■□□ 2.79
ACTR3B-201ENST00000256001 SEC24BO95487 1268 aa32.47■■■□□ 2.79
ACTR3B-201ENST00000256001 HAP1P54257 671 aaPredicted RBP32.47■■■□□ 2.79
ACTR3B-201ENST00000256001 NPHP4O75161 1426 aaPredicted RBP32.46■■■□□ 2.79
ACTR3B-201ENST00000256001 ADGRL3Q9HAR2 1447 aa32.46■■■□□ 2.79
ACTR3B-201ENST00000256001 ESCO1Q5FWF5 840 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms