RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 ATP10AO60312 1499 aa20.76■□□□□ 0.91
ACTN4-201ENST00000252699 PARD3Q8TEW0 1356 aa20.75■□□□□ 0.91
ACTN4-201ENST00000252699 DRC7Q8IY82 874 aa20.75■□□□□ 0.91
ACTN4-201ENST00000252699 H3BQV1 296 aa20.74■□□□□ 0.91
ACTN4-201ENST00000252699 IFFO2Q5TF58 517 aa20.74■□□□□ 0.91
ACTN4-201ENST00000252699 PPIP5K1Q6PFW1 1433 aa20.74■□□□□ 0.91
ACTN4-201ENST00000252699 CHMP4CQ96CF2 233 aa20.74■□□□□ 0.91
ACTN4-201ENST00000252699 DDX11L8A8MPP1 907 aa20.74■□□□□ 0.91
ACTN4-201ENST00000252699 ALDH1L2Q3SY69 923 aa20.74■□□□□ 0.91
ACTN4-201ENST00000252699 HSP90AB2PQ58FF8 381 aa20.74■□□□□ 0.91
ACTN4-201ENST00000252699 CNTROBQ8N137 903 aa20.74■□□□□ 0.91
ACTN4-201ENST00000252699 CARD14Q9BXL6 1004 aa20.74■□□□□ 0.91
ACTN4-201ENST00000252699 MBD5Q9P267 1494 aa20.74■□□□□ 0.91
ACTN4-201ENST00000252699 MAST1Q9Y2H9 1570 aa20.73■□□□□ 0.91
ACTN4-201ENST00000252699 FSD1Q9BTV5 496 aa20.73■□□□□ 0.91
ACTN4-201ENST00000252699 UHRF1BP1Q6BDS2 1440 aa20.73■□□□□ 0.91
ACTN4-201ENST00000252699 MPRIPQ6WCQ1 1025 aa20.73■□□□□ 0.91
ACTN4-201ENST00000252699 ERC1Q8IUD2 1116 aa20.73■□□□□ 0.91
ACTN4-201ENST00000252699 GOLGA6L3A6NEY3 463 aa20.72■□□□□ 0.91
ACTN4-201ENST00000252699 TTC21AQ8NDW8 1320 aa20.72■□□□□ 0.91
ACTN4-201ENST00000252699 LRRCC1Q9C099 1032 aa20.72■□□□□ 0.91
ACTN4-201ENST00000252699 ATP6V1DQ9Y5K8 247 aa20.72■□□□□ 0.91
ACTN4-201ENST00000252699 SF3A1Q15459 793 aaKnown RBP20.71■□□□□ 0.91
ACTN4-201ENST00000252699 WASHC4Q2M389 1173 aa20.71■□□□□ 0.91
ACTN4-201ENST00000252699 CPLX2Q6PUV4 134 aaKnown RBP20.71■□□□□ 0.91
ACTN4-201ENST00000252699 RPAP2Q8IXW5 612 aaPredicted RBP20.71■□□□□ 0.91
ACTN4-201ENST00000252699 SRGAP3O43295 1099 aa20.71■□□□□ 0.91
ACTN4-201ENST00000252699 TRDNQ13061 729 aa20.71■□□□□ 0.91
ACTN4-201ENST00000252699 NOL10Q9BSC4 688 aaKnown RBP20.71■□□□□ 0.91
ACTN4-201ENST00000252699 CHMP5Q9NZZ3 219 aa20.71■□□□□ 0.91
ACTN4-201ENST00000252699 SYNE3Q6ZMZ3 975 aa20.71■□□□□ 0.91
ACTN4-201ENST00000252699 CHD1LQ86WJ1 897 aa20.71■□□□□ 0.91
ACTN4-201ENST00000252699 ZRANB1Q9UGI0 708 aa20.71■□□□□ 0.91
ACTN4-201ENST00000252699 NEO1Q92859 1461 aa20.7■□□□□ 0.9
ACTN4-201ENST00000252699 PER1O15534 1290 aaPredicted RBP20.7■□□□□ 0.9
ACTN4-201ENST00000252699 DDX49Q9Y6V7 483 aaKnown RBP20.7■□□□□ 0.9
ACTN4-201ENST00000252699 PTCD1O75127 700 aaKnown RBP20.7■□□□□ 0.9
ACTN4-201ENST00000252699 SIL1Q9H173 461 aa20.7■□□□□ 0.9
ACTN4-201ENST00000252699 FAM83GA6ND36 823 aa20.69■□□□□ 0.9
ACTN4-201ENST00000252699 LRPPRCP42704 1394 aaKnown RBP20.69■□□□□ 0.9
ACTN4-201ENST00000252699 YTHDC2Q9H6S0 1430 aaKnown RBP20.69■□□□□ 0.9
ACTN4-201ENST00000252699 MSNP26038 577 aaKnown RBP20.69■□□□□ 0.9
ACTN4-201ENST00000252699 BACH2Q9BYV9 841 aa20.68■□□□□ 0.9
ACTN4-201ENST00000252699 KCNA6P17658 529 aa20.68■□□□□ 0.9
ACTN4-201ENST00000252699 CCDC34Q96HJ3 373 aa20.68■□□□□ 0.9
ACTN4-201ENST00000252699 POLKQ9UBT6 870 aa20.68■□□□□ 0.9
ACTN4-201ENST00000252699 TBX22Q9Y458 520 aa20.68■□□□□ 0.9
ACTN4-201ENST00000252699 DNAJC2Q99543 621 aaKnown RBP20.67■□□□□ 0.9
ACTN4-201ENST00000252699 ARHGEF5Q12774 1597 aa20.67■□□□□ 0.9
ACTN4-201ENST00000252699 AKAP17AQ02040 695 aaKnown RBP20.67■□□□□ 0.9
ACTN4-201ENST00000252699 DMRT2Q9Y5R5 561 aa20.67■□□□□ 0.9
ACTN4-201ENST00000252699 CPLX1O14810 134 aa20.66■□□□□ 0.9
ACTN4-201ENST00000252699 MCTP1Q6DN14 999 aa20.66■□□□□ 0.9
ACTN4-201ENST00000252699 NCKAP5LQ9HCH0 1330 aa20.66■□□□□ 0.9
ACTN4-201ENST00000252699 ADAMTS2O95450 1211 aa20.65■□□□□ 0.9
ACTN4-201ENST00000252699 AMOTL1Q8IY63 956 aa20.65■□□□□ 0.9
ACTN4-201ENST00000252699 CHRNA2Q15822 529 aa20.65■□□□□ 0.9
ACTN4-201ENST00000252699 NAP1L5Q96NT1 182 aaPredicted RBP20.65■□□□□ 0.9
ACTN4-201ENST00000252699 TRIM27P14373 513 aa20.65■□□□□ 0.9
ACTN4-201ENST00000252699 ANKRD24Q8TF21 1146 aa20.65■□□□□ 0.9
ACTN4-201ENST00000252699 POLR3AO14802 1390 aaPredicted RBP20.64■□□□□ 0.9
ACTN4-201ENST00000252699 MBIPQ9NS73 344 aa20.64■□□□□ 0.9
ACTN4-201ENST00000252699 F6X3S4 739 aa20.64■□□□□ 0.89
ACTN4-201ENST00000252699 CNNM1Q9NRU3 951 aa20.64■□□□□ 0.89
ACTN4-201ENST00000252699 A0A1W2PP64 1363 aa20.64■□□□□ 0.89
ACTN4-201ENST00000252699 RASSF8Q8NHQ8 419 aa20.64■□□□□ 0.89
ACTN4-201ENST00000252699 IL1RAPL2Q9NP60 686 aa20.64■□□□□ 0.89
ACTN4-201ENST00000252699 IL16Q14005 1332 aa20.64■□□□□ 0.89
ACTN4-201ENST00000252699 COL17A1Q9UMD9 1497 aaPredicted RBP20.63■□□□□ 0.89
ACTN4-201ENST00000252699 EXOC6BQ9Y2D4 811 aa20.63■□□□□ 0.89
ACTN4-201ENST00000252699 SMC3Q9UQE7 1217 aa20.63■□□□□ 0.89
ACTN4-201ENST00000252699 MSH6P52701 1360 aa20.63■□□□□ 0.89
ACTN4-201ENST00000252699 PHF14O94880 888 aa20.62■□□□□ 0.89
ACTN4-201ENST00000252699 RALYLQ86SE5 291 aaKnown RBP20.62■□□□□ 0.89
ACTN4-201ENST00000252699 TMOD3Q9NYL9 352 aa20.62■□□□□ 0.89
ACTN4-201ENST00000252699 FBXW7Q969H0 707 aa20.62■□□□□ 0.89
ACTN4-201ENST00000252699 HSPA2P54652 639 aa20.62■□□□□ 0.89
ACTN4-201ENST00000252699 NPATQ14207 1427 aa20.62■□□□□ 0.89
ACTN4-201ENST00000252699 AEBP1Q8IUX7 1158 aa20.62■□□□□ 0.89
ACTN4-201ENST00000252699 STARD3NLO95772 234 aa20.61■□□□□ 0.89
ACTN4-201ENST00000252699 EIF4A2Q14240 407 aaKnown RBP20.61■□□□□ 0.89
ACTN4-201ENST00000252699 CCDC57Q2TAC2 916 aa20.61■□□□□ 0.89
ACTN4-201ENST00000252699 SKOR2Q2VWA4 1001 aaPredicted RBP20.61■□□□□ 0.89
ACTN4-201ENST00000252699 YEATS2Q9ULM3 1422 aa20.61■□□□□ 0.89
ACTN4-201ENST00000252699 NEK4P51957 841 aa20.61■□□□□ 0.89
ACTN4-201ENST00000252699 ABCC1P33527 1531 aa20.6■□□□□ 0.89
ACTN4-201ENST00000252699 MYO5CQ9NQX4 1742 aa20.6■□□□□ 0.89
ACTN4-201ENST00000252699 VPS37CA5D8V6 355 aaPredicted RBP20.6■□□□□ 0.89
ACTN4-201ENST00000252699 HIP1O00291 1037 aa20.6■□□□□ 0.89
ACTN4-201ENST00000252699 NUCB2P80303 420 aa20.6■□□□□ 0.89
ACTN4-201ENST00000252699 CCDC27Q2M243 656 aa20.6■□□□□ 0.89
ACTN4-201ENST00000252699 TBC1D2BQ9UPU7 963 aa20.6■□□□□ 0.89
ACTN4-201ENST00000252699 NPHP3Q7Z494 1330 aa20.6■□□□□ 0.89
ACTN4-201ENST00000252699 LARP1Q6PKG0 1096 aaKnown RBP20.59■□□□□ 0.89
ACTN4-201ENST00000252699 C19orf44Q9H6X5 657 aa20.59■□□□□ 0.89
ACTN4-201ENST00000252699 NFXL1Q6ZNB6 911 aa20.59■□□□□ 0.89
ACTN4-201ENST00000252699 GCC2Q8IWJ2 1684 aa20.59■□□□□ 0.89
ACTN4-201ENST00000252699 DBF4Q9UBU7 674 aaPredicted RBP20.59■□□□□ 0.89
ACTN4-201ENST00000252699 AACSQ86V21 672 aa20.59■□□□□ 0.89
ACTN4-201ENST00000252699 FLIIQ13045 1269 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms