RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 RIMBP3CA6NJZ7 1639 aa32.21■■■□□ 2.75
RAB40C-201ENST00000248139 RIMBP3BA6NNM3 1639 aa32.21■■■□□ 2.75
RAB40C-201ENST00000248139 RIMBP3Q9UFD9 1639 aa32.21■■■□□ 2.75
RAB40C-201ENST00000248139 ANKRD45Q5TZF3 282 aa32.21■■■□□ 2.75
RAB40C-201ENST00000248139 AEBP1Q8IUX7 1158 aa32.2■■■□□ 2.75
RAB40C-201ENST00000248139 CCDC61Q9Y6R9 512 aa32.2■■■□□ 2.75
RAB40C-201ENST00000248139 ESF1Q9H501 851 aaKnown RBP32.2■■■□□ 2.74
RAB40C-201ENST00000248139 CHD1LQ86WJ1 897 aa32.19■■■□□ 2.74
RAB40C-201ENST00000248139 EDC4Q6P2E9 1401 aaKnown RBP32.19■■■□□ 2.74
RAB40C-201ENST00000248139 SETD1AO15047 1707 aaKnown RBP32.19■■■□□ 2.74
RAB40C-201ENST00000248139 TWISTNBQ3B726 338 aaPredicted RBP32.19■■■□□ 2.74
RAB40C-201ENST00000248139 PRR36Q9H6K5 1346 aa32.18■■■□□ 2.74
RAB40C-201ENST00000248139 DLC1Q96QB1 1528 aa32.18■■■□□ 2.74
RAB40C-201ENST00000248139 GNAI1P63096 354 aa32.18■■■□□ 2.74
RAB40C-201ENST00000248139 CDC42BPGQ6DT37 1551 aa32.18■■■□□ 2.74
RAB40C-201ENST00000248139 KRT24Q2M2I5 525 aa32.17■■■□□ 2.74
RAB40C-201ENST00000248139 SPATA31D1Q6ZQQ2 1576 aa32.17■■■□□ 2.74
RAB40C-201ENST00000248139 IFT57Q9NWB7 429 aa32.16■■■□□ 2.74
RAB40C-201ENST00000248139 ZNF853P0CG23 659 aa32.15■■■□□ 2.74
RAB40C-201ENST00000248139 SIRT2Q8IXJ6 389 aa32.15■■■□□ 2.74
RAB40C-201ENST00000248139 NRXN3Q9Y4C0 1643 aa32.14■■■□□ 2.74
RAB40C-201ENST00000248139 PPP6R1Q9UPN7 881 aa32.14■■■□□ 2.74
RAB40C-201ENST00000248139 ARXQ96QS3 562 aa32.12■■■□□ 2.73
RAB40C-201ENST00000248139 AGLP35573 1532 aa32.11■■■□□ 2.73
RAB40C-201ENST00000248139 SULT6B1Q6IMI4 303 aa32.11■■■□□ 2.73
RAB40C-201ENST00000248139 PLPPR3Q6T4P5 718 aa32.11■■■□□ 2.73
RAB40C-201ENST00000248139 CFAP44Q96MT7 982 aa32.11■■■□□ 2.73
RAB40C-201ENST00000248139 CALD1Q05682 793 aaKnown RBP32.1■■■□□ 2.73
RAB40C-201ENST00000248139 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.1■■■□□ 2.73
RAB40C-201ENST00000248139 BRPF1P55201 1214 aaPredicted RBP32.09■■■□□ 2.73
RAB40C-201ENST00000248139 CDK12Q9NYV4 1490 aaPredicted RBP32.08■■■□□ 2.73
RAB40C-201ENST00000248139 MCM10Q7L590 875 aa32.07■■■□□ 2.72
RAB40C-201ENST00000248139 ZNF428Q96B54 188 aa32.07■■■□□ 2.72
RAB40C-201ENST00000248139 EIF4A2Q14240 407 aaKnown RBP32.07■■■□□ 2.72
RAB40C-201ENST00000248139 ROBO2Q9HCK4 1378 aa32.07■■■□□ 2.72
RAB40C-201ENST00000248139 DLG5Q8TDM6 1919 aa32.06■■■□□ 2.72
RAB40C-201ENST00000248139 AATKQ6ZMQ8 1374 aa32.05■■■□□ 2.72
RAB40C-201ENST00000248139 HSP90AB2PQ58FF8 381 aa32.04■■■□□ 2.72
RAB40C-201ENST00000248139 ARHGAP45Q92619 1136 aa32.04■■■□□ 2.72
RAB40C-201ENST00000248139 ABCC4O15439 1325 aa32.04■■■□□ 2.72
RAB40C-201ENST00000248139 PTCH1Q13635 1447 aa32.03■■■□□ 2.72
RAB40C-201ENST00000248139 GZF1Q9H116 711 aaPredicted RBP32.03■■■□□ 2.72
RAB40C-201ENST00000248139 SLC26A8Q96RN1 970 aa32.02■■■□□ 2.72
RAB40C-201ENST00000248139 ACEP12821 1306 aa32.02■■■□□ 2.72
RAB40C-201ENST00000248139 MIS18AQ9NYP9 233 aa32.02■■■□□ 2.72
RAB40C-201ENST00000248139 REREQ9P2R6 1566 aa32.01■■■□□ 2.71
RAB40C-201ENST00000248139 HSCBQ8IWL3 235 aa32■■■□□ 2.71
RAB40C-201ENST00000248139 LMOD3Q0VAK6 560 aa32■■■□□ 2.71
RAB40C-201ENST00000248139 TTC21BQ7Z4L5 1316 aa32■■■□□ 2.71
RAB40C-201ENST00000248139 GCC1Q96CN9 775 aa31.99■■■□□ 2.71
RAB40C-201ENST00000248139 LTKP29376 864 aa31.99■■■□□ 2.71
RAB40C-201ENST00000248139 CEBPAP49715 358 aaPredicted RBP31.99■■■□□ 2.71
RAB40C-201ENST00000248139 BMP2KLQ5H9B9 411 aa31.98■■■□□ 2.71
RAB40C-201ENST00000248139 ZNF692Q9BU19 519 aaPredicted RBP31.98■■■□□ 2.71
RAB40C-201ENST00000248139 PIK3R4Q99570 1358 aa31.98■■■□□ 2.71
RAB40C-201ENST00000248139 FOXD4L1Q9NU39 408 aa31.98■■■□□ 2.71
RAB40C-201ENST00000248139 APBB1O00213 710 aa31.96■■■□□ 2.71
RAB40C-201ENST00000248139 TBC1D9Q6ZT07 1266 aa31.96■■■□□ 2.71
RAB40C-201ENST00000248139 C16orf71Q8IYS4 520 aaPredicted RBP31.96■■■□□ 2.71
RAB40C-201ENST00000248139 RBM42Q9BTD8 480 aaKnown RBP31.96■■■□□ 2.71
RAB40C-201ENST00000248139 TNRQ92752 1358 aa31.96■■■□□ 2.71
RAB40C-201ENST00000248139 MCM4P33991 863 aa31.96■■■□□ 2.71
RAB40C-201ENST00000248139 FOXO3O43524 673 aa31.95■■■□□ 2.71
RAB40C-201ENST00000248139 API5Q9BZZ5 524 aaKnown RBP31.95■■■□□ 2.71
RAB40C-201ENST00000248139 CD2BP2O95400 341 aaKnown RBP31.94■■■□□ 2.7
RAB40C-201ENST00000248139 CHMP5Q9NZZ3 219 aa31.94■■■□□ 2.7
RAB40C-201ENST00000248139 RBM25P49756 843 aaKnown RBP31.94■■■□□ 2.7
RAB40C-201ENST00000248139 HDGFP51858 240 aaKnown RBP31.94■■■□□ 2.7
RAB40C-201ENST00000248139 MON2Q7Z3U7 1717 aa31.93■■■□□ 2.7
RAB40C-201ENST00000248139 TMEM2Q9UHN6 1383 aa31.93■■■□□ 2.7
RAB40C-201ENST00000248139 KIF2CQ99661 725 aa31.92■■■□□ 2.7
RAB40C-201ENST00000248139 C3P01024 1663 aa31.91■■■□□ 2.7
RAB40C-201ENST00000248139 OTUD7AQ8TE49 926 aaPredicted RBP31.9■■■□□ 2.7
RAB40C-201ENST00000248139 GSPT1P15170 499 aaKnown RBP31.89■■■□□ 2.7
RAB40C-201ENST00000248139 CHMP4BQ9H444 224 aaKnown RBP31.89■■■□□ 2.7
RAB40C-201ENST00000248139 TECPR2O15040 1411 aa31.89■■■□□ 2.7
RAB40C-201ENST00000248139 SIRT1Q96EB6 747 aa31.88■■■□□ 2.69
RAB40C-201ENST00000248139 ADAMTS13Q76LX8 1427 aa31.87■■■□□ 2.69
RAB40C-201ENST00000248139 ITSN1Q15811 1721 aa31.87■■■□□ 2.69
RAB40C-201ENST00000248139 SMARCA5O60264 1052 aaPredicted RBP31.87■■■□□ 2.69
RAB40C-201ENST00000248139 CHL1O00533 1208 aa31.86■■■□□ 2.69
RAB40C-201ENST00000248139 AKAP12Q02952 1782 aa31.86■■■□□ 2.69
RAB40C-201ENST00000248139 HSP90AB1P08238 724 aaKnown RBP31.86■■■□□ 2.69
RAB40C-201ENST00000248139 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.86■■■□□ 2.69
RAB40C-201ENST00000248139 KNDC1Q76NI1 1749 aa31.85■■■□□ 2.69
RAB40C-201ENST00000248139 PLEKHM2Q8IWE5 1019 aa31.85■■■□□ 2.69
RAB40C-201ENST00000248139 MEIS3Q99687 375 aa31.84■■■□□ 2.69
RAB40C-201ENST00000248139 SLC4A2P04920 1241 aa31.83■■■□□ 2.69
RAB40C-201ENST00000248139 ANO8Q9HCE9 1232 aaPredicted RBP31.83■■■□□ 2.69
RAB40C-201ENST00000248139 MAP3K19Q56UN5 1328 aa31.82■■■□□ 2.68
RAB40C-201ENST00000248139 TRAK2O60296 914 aa31.82■■■□□ 2.68
RAB40C-201ENST00000248139 INTS3Q68E01 1043 aaKnown RBP31.82■■■□□ 2.68
RAB40C-201ENST00000248139 DCTPP1Q9H773 170 aa31.82■■■□□ 2.68
RAB40C-201ENST00000248139 F6X3S4 739 aa31.81■■■□□ 2.68
RAB40C-201ENST00000248139 MTHFSDQ2M296 383 aaKnown RBP31.81■■■□□ 2.68
RAB40C-201ENST00000248139 G2E3Q7L622 706 aa31.81■■■□□ 2.68
RAB40C-201ENST00000248139 MSH6P52701 1360 aa31.8■■■□□ 2.68
RAB40C-201ENST00000248139 OVOS2A0A0J9YW53 1432 aa31.8■■■□□ 2.68
RAB40C-201ENST00000248139 OVOS2Q6IE36 1432 aa31.8■■■□□ 2.68
RAB40C-201ENST00000248139 NUTM2GQ5VZR2 741 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms