RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 CHD1LQ86WJ1 897 aa13.63□□□□□ -0.23
FAM78A-201ENST00000247295 AEBP1Q8IUX7 1158 aa13.63□□□□□ -0.23
FAM78A-201ENST00000247295 EXOC6BQ9Y2D4 811 aa13.63□□□□□ -0.23
FAM78A-201ENST00000247295 GPS2Q13227 327 aa13.63□□□□□ -0.23
FAM78A-201ENST00000247295 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
FAM78A-201ENST00000247295 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 SETQ01105 290 aaPredicted RBP13.62□□□□□ -0.23
FAM78A-201ENST00000247295 NFE2L2Q16236 605 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 TRERF1Q96PN7 1200 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 CGNQ9P2M7 1197 aaKnown RBP13.62□□□□□ -0.23
FAM78A-201ENST00000247295 FIBPO43427 364 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 ATP2B1P20020 1258 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 SPC24Q8NBT2 197 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
FAM78A-201ENST00000247295 SRGAP3O43295 1099 aa13.61□□□□□ -0.23
FAM78A-201ENST00000247295 RARSP54136 660 aaKnown RBP13.61□□□□□ -0.23
FAM78A-201ENST00000247295 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
FAM78A-201ENST00000247295 PANK2Q9BZ23 570 aa13.61□□□□□ -0.23
FAM78A-201ENST00000247295 PTPRKQ15262 1439 aa13.61□□□□□ -0.23
FAM78A-201ENST00000247295 TPM3P06753 285 aa13.61□□□□□ -0.23
FAM78A-201ENST00000247295 CHMP4CQ96CF2 233 aa13.6□□□□□ -0.23
FAM78A-201ENST00000247295 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
FAM78A-201ENST00000247295 URB2Q14146 1524 aaKnown RBP13.6□□□□□ -0.23
FAM78A-201ENST00000247295 TATP17735 454 aaPredicted RBP13.6□□□□□ -0.23
FAM78A-201ENST00000247295 CEBPAP49715 358 aaPredicted RBP13.6□□□□□ -0.23
FAM78A-201ENST00000247295 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
FAM78A-201ENST00000247295 USHBP1Q8N6Y0 703 aa13.6□□□□□ -0.23
FAM78A-201ENST00000247295 CEBPZQ03701 1054 aaKnown RBP13.59□□□□□ -0.23
FAM78A-201ENST00000247295 TOM1L2Q6ZVM7 507 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 GRIN2AQ12879 1464 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 PATL2C9JE40 543 aaKnown RBP13.59□□□□□ -0.23
FAM78A-201ENST00000247295 CCT4P50991 539 aaKnown RBP13.59□□□□□ -0.23
FAM78A-201ENST00000247295 RABEP1Q15276 862 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 SKIDA1Q1XH10 827 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 CCDC73Q6ZRK6 1079 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 CCDC85AQ96PX6 553 aaPredicted RBP13.59□□□□□ -0.23
FAM78A-201ENST00000247295 NOL10Q9BSC4 688 aaKnown RBP13.59□□□□□ -0.23
FAM78A-201ENST00000247295 SASS6Q6UVJ0 657 aa13.59□□□□□ -0.23
FAM78A-201ENST00000247295 STK3Q13188 491 aa13.58□□□□□ -0.23
FAM78A-201ENST00000247295 SDF4Q9BRK5 362 aa13.58□□□□□ -0.23
FAM78A-201ENST00000247295 RPRD2Q5VT52 1461 aaKnown RBP13.58□□□□□ -0.24
FAM78A-201ENST00000247295 CT47B1P0C2W7 299 aaPredicted RBP13.58□□□□□ -0.24
FAM78A-201ENST00000247295 CD109Q6YHK3 1445 aa13.58□□□□□ -0.24
FAM78A-201ENST00000247295 F6X3S4 739 aa13.58□□□□□ -0.24
FAM78A-201ENST00000247295 SMARCA5O60264 1052 aaPredicted RBP13.58□□□□□ -0.24
FAM78A-201ENST00000247295 NINLQ9Y2I6 1382 aa13.58□□□□□ -0.24
FAM78A-201ENST00000247295 ERICH2A1L162 156 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 STK11IPQ8N1F8 1099 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 PRDM11Q9NQV5 511 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 DISP3Q9P2K9 1392 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 MNS1Q8NEH6 495 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.57□□□□□ -0.24
FAM78A-201ENST00000247295 CABP4P57796 275 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 ANKLE2Q86XL3 938 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 PDCL2Q8N4E4 241 aa13.57□□□□□ -0.24
FAM78A-201ENST00000247295 FMNL2Q96PY5 1086 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
FAM78A-201ENST00000247295 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
FAM78A-201ENST00000247295 CLCN1P35523 988 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 AMOTL1Q8IY63 956 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 BTBD11A6QL63 1104 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 FOXO3O43524 673 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 TSPY26PQ9H489 355 aa13.56□□□□□ -0.24
FAM78A-201ENST00000247295 PSMA5P28066 241 aa13.55□□□□□ -0.24
FAM78A-201ENST00000247295 CWC27Q6UX04 472 aaKnown RBP13.55□□□□□ -0.24
FAM78A-201ENST00000247295 NUTM1Q86Y26 1132 aa13.55□□□□□ -0.24
FAM78A-201ENST00000247295 TSR1Q2NL82 804 aaKnown RBP13.55□□□□□ -0.24
FAM78A-201ENST00000247295 UPF3BQ9BZI7 483 aaKnown RBP13.55□□□□□ -0.24
FAM78A-201ENST00000247295 ADGRL1O94910 1474 aa13.55□□□□□ -0.24
FAM78A-201ENST00000247295 AACSQ86V21 672 aa13.55□□□□□ -0.24
FAM78A-201ENST00000247295 PTCD1O75127 700 aaKnown RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 SAFBQ15424 915 aaKnown RBP eCLIP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 TRIM5Q9C035 493 aa13.54□□□□□ -0.24
FAM78A-201ENST00000247295 ARGLU1Q9NWB6 273 aaPredicted RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 THOC2Q8NI27 1593 aaKnown RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 SPDYE4A6NLX3 237 aa13.54□□□□□ -0.24
FAM78A-201ENST00000247295 K7ELQ4 463 aaPredicted RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 NOM1Q5C9Z4 860 aaKnown RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 MEX3CQ5U5Q3 659 aaKnown RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 PCMTD1Q96MG8 357 aaPredicted RBP13.54□□□□□ -0.24
FAM78A-201ENST00000247295 CNNM1Q9NRU3 951 aa13.54□□□□□ -0.24
FAM78A-201ENST00000247295 MAP3K1Q13233 1512 aa13.54□□□□□ -0.24
FAM78A-201ENST00000247295 FAM83GA6ND36 823 aa13.53□□□□□ -0.24
FAM78A-201ENST00000247295 TRIM27P14373 513 aa13.53□□□□□ -0.24
FAM78A-201ENST00000247295 LAMC3Q9Y6N6 1575 aa13.53□□□□□ -0.24
FAM78A-201ENST00000247295 RRAGDQ9NQL2 400 aaPredicted RBP13.53□□□□□ -0.24
FAM78A-201ENST00000247295 NOS1P29475 1434 aa13.53□□□□□ -0.24
FAM78A-201ENST00000247295 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.24
FAM78A-201ENST00000247295 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.24
FAM78A-201ENST00000247295 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.24
FAM78A-201ENST00000247295 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.24
FAM78A-201ENST00000247295 FKBP4Q02790 459 aaKnown RBP eCLIP13.52□□□□□ -0.24
FAM78A-201ENST00000247295 RPAP2Q8IXW5 612 aaPredicted RBP13.52□□□□□ -0.24
FAM78A-201ENST00000247295 TPM1P09493 284 aa13.52□□□□□ -0.25
FAM78A-201ENST00000247295 MBD3O95983 291 aa13.52□□□□□ -0.25
FAM78A-201ENST00000247295 TRIM34Q9BYJ4 488 aa13.52□□□□□ -0.25
FAM78A-201ENST00000247295 TBC1D2BQ9UPU7 963 aa13.52□□□□□ -0.25
FAM78A-201ENST00000247295 CUL7Q14999 1698 aa13.52□□□□□ -0.25
FAM78A-201ENST00000247295 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms