RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 BAG6P46379 1132 aa22.87■■□□□ 1.25
CLPP-201ENST00000245816 EZH2Q15910 746 aaKnown RBP22.87■■□□□ 1.25
CLPP-201ENST00000245816 CAMKK2Q96RR4 588 aa22.87■■□□□ 1.25
CLPP-201ENST00000245816 THRAP3Q9Y2W1 955 aaKnown RBP22.87■■□□□ 1.25
CLPP-201ENST00000245816 FAM196AQ6ZSG2 479 aa22.86■■□□□ 1.25
CLPP-201ENST00000245816 USP54Q70EL1 1684 aa22.86■■□□□ 1.25
CLPP-201ENST00000245816 PEAK1Q9H792 1746 aa22.85■■□□□ 1.25
CLPP-201ENST00000245816 PSDA5PKW4 1024 aaPredicted RBP22.85■■□□□ 1.25
CLPP-201ENST00000245816 WDR17Q8IZU2 1322 aa22.84■■□□□ 1.25
CLPP-201ENST00000245816 TMC1Q8TDI8 760 aa22.84■■□□□ 1.25
CLPP-201ENST00000245816 A0A1W2PP64 1363 aa22.84■■□□□ 1.25
CLPP-201ENST00000245816 PTF1AQ7RTS3 328 aa22.83■■□□□ 1.25
CLPP-201ENST00000245816 LRRC37A3O60309 1634 aa22.82■■□□□ 1.24
CLPP-201ENST00000245816 PDE3BQ13370 1112 aa22.82■■□□□ 1.24
CLPP-201ENST00000245816 KCNH5Q8NCM2 988 aa22.82■■□□□ 1.24
CLPP-201ENST00000245816 PUS7Q96PZ0 661 aaKnown RBP22.82■■□□□ 1.24
CLPP-201ENST00000245816 TOM1L2Q6ZVM7 507 aa22.81■■□□□ 1.24
CLPP-201ENST00000245816 WNK3Q9BYP7 1800 aa22.8■■□□□ 1.24
CLPP-201ENST00000245816 SLC24A1O60721 1099 aa22.79■■□□□ 1.24
CLPP-201ENST00000245816 APBA3O96018 575 aa22.79■■□□□ 1.24
CLPP-201ENST00000245816 OVOS2A0A0J9YW53 1432 aa22.78■■□□□ 1.24
CLPP-201ENST00000245816 OVOS2Q6IE36 1432 aa22.78■■□□□ 1.24
CLPP-201ENST00000245816 EDC4Q6P2E9 1401 aaKnown RBP22.78■■□□□ 1.24
CLPP-201ENST00000245816 MARCH10Q8NA82 808 aaPredicted RBP22.78■■□□□ 1.24
CLPP-201ENST00000245816 CCER1Q8TC90 406 aaPredicted RBP22.78■■□□□ 1.24
CLPP-201ENST00000245816 CARD10Q9BWT7 1032 aa22.78■■□□□ 1.24
CLPP-201ENST00000245816 FBLN1P23142 703 aa22.77■■□□□ 1.24
CLPP-201ENST00000245816 RREB1Q92766 1687 aa22.76■■□□□ 1.23
CLPP-201ENST00000245816 SBF2Q86WG5 1849 aa22.75■■□□□ 1.23
CLPP-201ENST00000245816 R3HDM1Q15032 1099 aaKnown RBP22.75■■□□□ 1.23
CLPP-201ENST00000245816 HDGFL2Q7Z4V5 671 aaPredicted RBP22.75■■□□□ 1.23
CLPP-201ENST00000245816 LTN1O94822 1766 aa22.73■■□□□ 1.23
CLPP-201ENST00000245816 ABCC6O95255 1503 aa22.73■■□□□ 1.23
CLPP-201ENST00000245816 DDB1Q16531 1140 aa22.73■■□□□ 1.23
CLPP-201ENST00000245816 NUP188Q5SRE5 1749 aa22.73■■□□□ 1.23
CLPP-201ENST00000245816 USP47Q96K76 1375 aa22.73■■□□□ 1.23
CLPP-201ENST00000245816 TERF2IPQ9NYB0 399 aa22.72■■□□□ 1.23
CLPP-201ENST00000245816 ERBB3P21860 1342 aa22.71■■□□□ 1.23
CLPP-201ENST00000245816 OVOS2A0A0G2JMS6 1433 aa22.71■■□□□ 1.23
CLPP-201ENST00000245816 LRP5O75197 1615 aa22.71■■□□□ 1.23
CLPP-201ENST00000245816 CSB-PGBD3P0DP91 1061 aa22.7■■□□□ 1.22
CLPP-201ENST00000245816 PROM2Q8N271 834 aa22.69■■□□□ 1.22
CLPP-201ENST00000245816 BCL9O00512 1426 aa22.67■■□□□ 1.22
CLPP-201ENST00000245816 ANKRD24Q8TF21 1146 aa22.67■■□□□ 1.22
CLPP-201ENST00000245816 ANKRD36BQ8N2N9 1353 aa22.66■■□□□ 1.22
CLPP-201ENST00000245816 PARD3Q8TEW0 1356 aa22.66■■□□□ 1.22
CLPP-201ENST00000245816 NINLQ9Y2I6 1382 aa22.66■■□□□ 1.22
CLPP-201ENST00000245816 CCDC7Q96M83 1385 aa22.65■■□□□ 1.22
CLPP-201ENST00000245816 CDCA7Q9BWT1 371 aaPredicted RBP22.65■■□□□ 1.22
CLPP-201ENST00000245816 MAP3K19Q56UN5 1328 aa22.64■■□□□ 1.22
CLPP-201ENST00000245816 FYB1O15117 783 aa22.64■■□□□ 1.21
CLPP-201ENST00000245816 KCNQ2O43526 872 aa22.64■■□□□ 1.21
CLPP-201ENST00000245816 IP6K1Q92551 441 aa22.64■■□□□ 1.21
CLPP-201ENST00000245816 BCL11BQ9C0K0 894 aaPredicted RBP22.64■■□□□ 1.21
CLPP-201ENST00000245816 EXOC5O00471 708 aa22.63■■□□□ 1.21
CLPP-201ENST00000245816 CARD14Q9BXL6 1004 aa22.63■■□□□ 1.21
CLPP-201ENST00000245816 NLRP2Q9NX02 1062 aa22.63■■□□□ 1.21
CLPP-201ENST00000245816 TNS2Q63HR2 1409 aa22.63■■□□□ 1.21
CLPP-201ENST00000245816 PLSCR1O15162 318 aa22.62■■□□□ 1.21
CLPP-201ENST00000245816 TMF1P82094 1093 aa22.62■■□□□ 1.21
CLPP-201ENST00000245816 ANO8Q9HCE9 1232 aaPredicted RBP22.61■■□□□ 1.21
CLPP-201ENST00000245816 MYOM1P52179 1685 aa22.61■■□□□ 1.21
CLPP-201ENST00000245816 GGNBP2Q9H3C7 697 aa22.6■■□□□ 1.21
CLPP-201ENST00000245816 RGPD3A6NKT7 1758 aaPredicted RBP22.59■■□□□ 1.21
CLPP-201ENST00000245816 RGPD4Q7Z3J3 1758 aa22.59■■□□□ 1.21
CLPP-201ENST00000245816 HOXC9P31274 260 aa22.59■■□□□ 1.21
CLPP-201ENST00000245816 LTV1Q96GA3 475 aaPredicted RBP22.59■■□□□ 1.21
CLPP-201ENST00000245816 COG3Q96JB2 828 aa22.59■■□□□ 1.21
CLPP-201ENST00000245816 RGPD2P0DJD1 1756 aa22.58■■□□□ 1.21
CLPP-201ENST00000245816 C11orf95C9JLR9 678 aaPredicted RBP22.58■■□□□ 1.21
CLPP-201ENST00000245816 PDGFDQ9GZP0 370 aaPredicted RBP22.58■■□□□ 1.21
CLPP-201ENST00000245816 FAM208AQ9UK61 1670 aaKnown RBP22.58■■□□□ 1.2
CLPP-201ENST00000245816 IL2RBP14784 551 aa22.57■■□□□ 1.2
CLPP-201ENST00000245816 RRS1Q15050 365 aaKnown RBP22.57■■□□□ 1.2
CLPP-201ENST00000245816 ACSBG1Q96GR2 724 aa22.56■■□□□ 1.2
CLPP-201ENST00000245816 NHSQ6T4R5 1651 aa22.53■■□□□ 1.2
CLPP-201ENST00000245816 CDCA8Q53HL2 280 aa22.53■■□□□ 1.2
CLPP-201ENST00000245816 TXNRD1Q16881 649 aa22.51■■□□□ 1.19
CLPP-201ENST00000245816 NBPF14Q5TI25 921 aa22.51■■□□□ 1.19
CLPP-201ENST00000245816 NBPF6Q5VWK0 638 aa22.51■■□□□ 1.19
CLPP-201ENST00000245816 NBPF4Q96M43 638 aa22.51■■□□□ 1.19
CLPP-201ENST00000245816 SHANK3Q9BYB0 1731 aa22.51■■□□□ 1.19
CLPP-201ENST00000245816 MEGF6O75095 1541 aa22.5■■□□□ 1.19
CLPP-201ENST00000245816 CASZ1Q86V15 1759 aa22.5■■□□□ 1.19
CLPP-201ENST00000245816 KIF20BQ96Q89 1820 aa22.5■■□□□ 1.19
CLPP-201ENST00000245816 AMPHP49418 695 aa22.49■■□□□ 1.19
CLPP-201ENST00000245816 HSP90AB2PQ58FF8 381 aa22.49■■□□□ 1.19
CLPP-201ENST00000245816 NSD3Q9BZ95 1437 aa22.48■■□□□ 1.19
CLPP-201ENST00000245816 USHBP1Q8N6Y0 703 aa22.48■■□□□ 1.19
CLPP-201ENST00000245816 BTAF1O14981 1849 aa22.47■■□□□ 1.19
CLPP-201ENST00000245816 DDX54Q8TDD1 881 aaKnown RBP22.46■■□□□ 1.19
CLPP-201ENST00000245816 RTL1A6NKG5 1358 aa22.46■■□□□ 1.19
CLPP-201ENST00000245816 HSPA5P11021 654 aaKnown RBP22.45■■□□□ 1.18
CLPP-201ENST00000245816 EIF4G2P78344 907 aaKnown RBP eCLIP22.45■■□□□ 1.18
CLPP-201ENST00000245816 LRRC4BQ9NT99 713 aa22.45■■□□□ 1.18
CLPP-201ENST00000245816 EMILIN1Q9Y6C2 1016 aa22.45■■□□□ 1.18
CLPP-201ENST00000245816 PAPPAQ13219 1627 aa22.45■■□□□ 1.18
CLPP-201ENST00000245816 NSD2O96028 1365 aa22.44■■□□□ 1.18
CLPP-201ENST00000245816 INSRP06213 1382 aa22.42■■□□□ 1.18
CLPP-201ENST00000245816 SLC15A2Q16348 729 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms