RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 NUP155O75694 1391 aa11.76□□□□□ -0.53
IRF1-201ENST00000245414 INSRP06213 1382 aa11.76□□□□□ -0.53
IRF1-201ENST00000245414 SLC26A8Q96RN1 970 aa11.76□□□□□ -0.53
IRF1-201ENST00000245414 NCAPGQ9BPX3 1015 aa11.76□□□□□ -0.53
IRF1-201ENST00000245414 CFDP1Q9UEE9 299 aaPredicted RBP11.76□□□□□ -0.53
IRF1-201ENST00000245414 RRP7AQ9Y3A4 280 aaKnown RBP11.76□□□□□ -0.53
IRF1-201ENST00000245414 CDK13Q14004 1512 aaKnown RBP11.76□□□□□ -0.53
IRF1-201ENST00000245414 SMTNL1A8MU46 457 aa11.76□□□□□ -0.53
IRF1-201ENST00000245414 RARSP54136 660 aaKnown RBP11.76□□□□□ -0.53
IRF1-201ENST00000245414 KRBA2Q6ZNG9 492 aa11.76□□□□□ -0.53
IRF1-201ENST00000245414 ZGPATQ8N5A5 531 aaKnown RBP11.76□□□□□ -0.53
IRF1-201ENST00000245414 TRIM66O15016 1216 aa11.75□□□□□ -0.53
IRF1-201ENST00000245414 TPD52L1Q16890 204 aaPredicted RBP11.75□□□□□ -0.53
IRF1-201ENST00000245414 TRMT2AQ8IZ69 625 aaKnown RBP11.75□□□□□ -0.53
IRF1-201ENST00000245414 ARHGEF11O15085 1522 aa11.75□□□□□ -0.53
IRF1-201ENST00000245414 NPM1P06748 294 aaKnown RBP eCLIP11.75□□□□□ -0.53
IRF1-201ENST00000245414 MVPQ14764 893 aaKnown RBP11.75□□□□□ -0.53
IRF1-201ENST00000245414 SYT10Q6XYQ8 523 aa11.75□□□□□ -0.53
IRF1-201ENST00000245414 CWC22Q9HCG8 908 aaKnown RBP11.75□□□□□ -0.53
IRF1-201ENST00000245414 HTATSF1O43719 755 aaKnown RBP11.74□□□□□ -0.53
IRF1-201ENST00000245414 UVSSAQ2YD98 709 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 CDCA8Q53HL2 280 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 KIF2CQ99661 725 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 DEF6Q9H4E7 631 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 NUP160Q12769 1436 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 TPM3P06753 285 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 CASQ1P31415 396 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 CCDC191Q8NCU4 936 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 GDPD2Q9HCC8 539 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 DAPK1P53355 1430 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 CYP2C19P33261 490 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 RABEP1Q15276 862 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 DZIP1LQ8IYY4 767 aaKnown RBP11.74□□□□□ -0.53
IRF1-201ENST00000245414 KIAA1107Q9UPP5 1409 aa11.74□□□□□ -0.53
IRF1-201ENST00000245414 ST18O60284 1047 aa11.73□□□□□ -0.53
IRF1-201ENST00000245414 CWC15Q9P013 229 aaKnown RBP11.73□□□□□ -0.53
IRF1-201ENST00000245414 GCC2Q8IWJ2 1684 aa11.73□□□□□ -0.53
IRF1-201ENST00000245414 KDM5CP41229 1560 aa11.73□□□□□ -0.53
IRF1-201ENST00000245414 KMT5BQ4FZB7 885 aa11.73□□□□□ -0.53
IRF1-201ENST00000245414 SIRT1Q96EB6 747 aa11.73□□□□□ -0.53
IRF1-201ENST00000245414 MYO1CO00159 1063 aa11.73□□□□□ -0.53
IRF1-201ENST00000245414 NOP2P46087 812 aaKnown RBP11.73□□□□□ -0.53
IRF1-201ENST00000245414 GPS2Q13227 327 aa11.73□□□□□ -0.53
IRF1-201ENST00000245414 ANKRD45Q5TZF3 282 aa11.73□□□□□ -0.53
IRF1-201ENST00000245414 ZKSCAN2Q63HK3 967 aa11.73□□□□□ -0.53
IRF1-201ENST00000245414 CREBRFQ8IUR6 639 aa11.73□□□□□ -0.53
IRF1-201ENST00000245414 AK9Q5TCS8 1911 aa11.73□□□□□ -0.53
IRF1-201ENST00000245414 ABCC5O15440 1437 aa11.72□□□□□ -0.53
IRF1-201ENST00000245414 SART3Q15020 963 aaKnown RBP11.72□□□□□ -0.53
IRF1-201ENST00000245414 CEP83Q9Y592 693 aa11.72□□□□□ -0.53
IRF1-201ENST00000245414 TMF1P82094 1093 aa11.72□□□□□ -0.53
IRF1-201ENST00000245414 SYCP1Q15431 976 aa11.72□□□□□ -0.53
IRF1-201ENST00000245414 CT47A1Q5JQC4 288 aaPredicted RBP11.72□□□□□ -0.53
IRF1-201ENST00000245414 TBC1D9Q6ZT07 1266 aa11.72□□□□□ -0.53
IRF1-201ENST00000245414 PLEKHD1A6NEE1 506 aa11.72□□□□□ -0.53
IRF1-201ENST00000245414 BMS1Q14692 1282 aaKnown RBP11.72□□□□□ -0.53
IRF1-201ENST00000245414 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
IRF1-201ENST00000245414 TXLNBQ8N3L3 684 aa11.72□□□□□ -0.53
IRF1-201ENST00000245414 LRRFIP2Q9Y608 721 aaKnown RBP11.72□□□□□ -0.53
IRF1-201ENST00000245414 KDM4AO75164 1064 aa11.71□□□□□ -0.53
IRF1-201ENST00000245414 NOL8Q76FK4 1167 aaKnown RBP11.71□□□□□ -0.53
IRF1-201ENST00000245414 NUP153P49790 1475 aaKnown RBP11.71□□□□□ -0.53
IRF1-201ENST00000245414 ELF2Q15723 593 aa11.71□□□□□ -0.54
IRF1-201ENST00000245414 JRKLQ9Y4A0 524 aa11.71□□□□□ -0.54
IRF1-201ENST00000245414 PAXBP1Q9Y5B6 917 aa11.71□□□□□ -0.54
IRF1-201ENST00000245414 CCDC144AA2RUR9 1427 aa11.71□□□□□ -0.54
IRF1-201ENST00000245414 DISP3Q9P2K9 1392 aa11.71□□□□□ -0.54
IRF1-201ENST00000245414 CCDC172P0C7W6 258 aa11.71□□□□□ -0.54
IRF1-201ENST00000245414 PTGS1P23219 599 aa11.71□□□□□ -0.54
IRF1-201ENST00000245414 RAPGEF6Q8TEU7 1601 aa11.7□□□□□ -0.54
IRF1-201ENST00000245414 TMED8Q6PL24 325 aaPredicted RBP11.7□□□□□ -0.54
IRF1-201ENST00000245414 PZPP20742 1482 aa11.7□□□□□ -0.54
IRF1-201ENST00000245414 REC8O95072 547 aa11.69□□□□□ -0.54
IRF1-201ENST00000245414 BRPF1P55201 1214 aaPredicted RBP11.69□□□□□ -0.54
IRF1-201ENST00000245414 E2F4Q16254 413 aa11.69□□□□□ -0.54
IRF1-201ENST00000245414 CYB5RLQ6IPT4 315 aa11.69□□□□□ -0.54
IRF1-201ENST00000245414 FBXO38Q6PIJ6 1188 aa11.69□□□□□ -0.54
IRF1-201ENST00000245414 KCNF1Q9H3M0 494 aa11.69□□□□□ -0.54
IRF1-201ENST00000245414 NPC1L1Q9UHC9 1359 aa11.69□□□□□ -0.54
IRF1-201ENST00000245414 HSP90B1P14625 803 aaKnown RBP11.69□□□□□ -0.54
IRF1-201ENST00000245414 TDO2P48775 406 aa11.69□□□□□ -0.54
IRF1-201ENST00000245414 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.54
IRF1-201ENST00000245414 CHD1LQ86WJ1 897 aa11.69□□□□□ -0.54
IRF1-201ENST00000245414 ZNF215Q9UL58 517 aaPredicted RBP11.69□□□□□ -0.54
IRF1-201ENST00000245414 CYP2E1P05181 493 aaPredicted RBP11.69□□□□□ -0.54
IRF1-201ENST00000245414 GUCY2CP25092 1073 aa11.69□□□□□ -0.54
IRF1-201ENST00000245414 TTC31Q49AM3 519 aaPredicted RBP11.69□□□□□ -0.54
IRF1-201ENST00000245414 BRMS1Q9HCU9 246 aa11.69□□□□□ -0.54
IRF1-201ENST00000245414 TCOF1Q13428 1488 aaKnown RBP11.69□□□□□ -0.54
IRF1-201ENST00000245414 RALGAPBQ86X10 1494 aa11.68□□□□□ -0.54
IRF1-201ENST00000245414 TPM4P67936 248 aa11.68□□□□□ -0.54
IRF1-201ENST00000245414 ZSCAN26Q16670 478 aa11.68□□□□□ -0.54
IRF1-201ENST00000245414 CEP135Q66GS9 1140 aa11.68□□□□□ -0.54
IRF1-201ENST00000245414 JPH4Q96JJ6 628 aa11.68□□□□□ -0.54
IRF1-201ENST00000245414 TSPY4P0CV99 314 aa11.68□□□□□ -0.54
IRF1-201ENST00000245414 TSPY10P0CW01 314 aa11.68□□□□□ -0.54
IRF1-201ENST00000245414 TRHP20396 242 aaPredicted RBP11.68□□□□□ -0.54
IRF1-201ENST00000245414 BMP2KLQ5H9B9 411 aa11.68□□□□□ -0.54
IRF1-201ENST00000245414 DDX19BQ9UMR2 479 aa11.68□□□□□ -0.54
IRF1-201ENST00000245414 A0A1B0GUL7 405 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms