RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 TRPM2O94759 1503 aa11.27□□□□□ -0.6
SRSF6-201ENST00000244020 MBD3O95983 291 aa11.27□□□□□ -0.6
SRSF6-201ENST00000244020 GGT6Q6P531 493 aa11.27□□□□□ -0.6
SRSF6-201ENST00000244020 ZHX1Q9UKY1 873 aaPredicted RBP11.27□□□□□ -0.6
SRSF6-201ENST00000244020 NEK4P51957 841 aa11.27□□□□□ -0.61
SRSF6-201ENST00000244020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.27□□□□□ -0.615e-8■■■□□ 15.9
SRSF6-201ENST00000244020 NOS1P29475 1434 aa11.27□□□□□ -0.61
SRSF6-201ENST00000244020 CLEC17AQ6ZS10 378 aa11.27□□□□□ -0.61
SRSF6-201ENST00000244020 CHAMP1Q96JM3 812 aa11.27□□□□□ -0.61
SRSF6-201ENST00000244020 PLEKHF1Q96S99 279 aa11.27□□□□□ -0.61
SRSF6-201ENST00000244020 TSPY26PQ9H489 355 aa11.27□□□□□ -0.61
SRSF6-201ENST00000244020 NRDCO43847 1150 aa11.26□□□□□ -0.61
SRSF6-201ENST00000244020 C16orf71Q8IYS4 520 aaPredicted RBP11.26□□□□□ -0.61
SRSF6-201ENST00000244020 GPT2Q8TD30 523 aa11.26□□□□□ -0.61
SRSF6-201ENST00000244020 GOLGA6L4A6NEF3 574 aa11.26□□□□□ -0.61
SRSF6-201ENST00000244020 ZNF428Q96B54 188 aa11.26□□□□□ -0.61
SRSF6-201ENST00000244020 API5Q9BZZ5 524 aaKnown RBP11.26□□□□□ -0.61
SRSF6-201ENST00000244020 CEP152O94986 1710 aa11.26□□□□□ -0.61
SRSF6-201ENST00000244020 USP26Q9BXU7 913 aa11.26□□□□□ -0.61
SRSF6-201ENST00000244020 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
SRSF6-201ENST00000244020 TMEM63CQ9P1W3 806 aa11.26□□□□□ -0.61
SRSF6-201ENST00000244020 PHF14O94880 888 aa11.25□□□□□ -0.61
SRSF6-201ENST00000244020 TWISTNBQ3B726 338 aaPredicted RBP11.25□□□□□ -0.61
SRSF6-201ENST00000244020 PLEKHM2Q8IWE5 1019 aa11.25□□□□□ -0.61
SRSF6-201ENST00000244020 BBXQ8WY36 941 aaPredicted RBP11.25□□□□□ -0.61
SRSF6-201ENST00000244020 C14orf93Q9H972 538 aaKnown RBP11.25□□□□□ -0.61
SRSF6-201ENST00000244020 GSPT1P15170 499 aaKnown RBP11.25□□□□□ -0.61
SRSF6-201ENST00000244020 GNAI1P63096 354 aa11.25□□□□□ -0.61
SRSF6-201ENST00000244020 TTC22Q5TAA0 569 aa11.25□□□□□ -0.61
SRSF6-201ENST00000244020 HDGFL2Q7Z4V5 671 aaPredicted RBP11.25□□□□□ -0.61
SRSF6-201ENST00000244020 SBNO2Q9Y2G9 1366 aa11.25□□□□□ -0.61
SRSF6-201ENST00000244020 CLTCL1P53675 1640 aa11.25□□□□□ -0.61
SRSF6-201ENST00000244020 PLCH2O75038 1416 aa11.25□□□□□ -0.61
SRSF6-201ENST00000244020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.25□□□□□ -0.61
SRSF6-201ENST00000244020 TSPYL6Q8N831 410 aa11.24□□□□□ -0.61
SRSF6-201ENST00000244020 PDLIM2Q96JY6 352 aa11.24□□□□□ -0.61
SRSF6-201ENST00000244020 SPHKAPQ2M3C7 1700 aa11.24□□□□□ -0.61
SRSF6-201ENST00000244020 NSD2O96028 1365 aa11.24□□□□□ -0.61
SRSF6-201ENST00000244020 ANKRD36BQ8N2N9 1353 aa11.24□□□□□ -0.61
SRSF6-201ENST00000244020 MCCP23508 829 aa11.24□□□□□ -0.61
SRSF6-201ENST00000244020 SMAP1Q8IYB5 467 aaPredicted RBP11.24□□□□□ -0.61
SRSF6-201ENST00000244020 MRPL50Q8N5N7 158 aaKnown RBP11.24□□□□□ -0.61
SRSF6-201ENST00000244020 MINK1Q8N4C8 1332 aaPredicted RBP11.24□□□□□ -0.61
SRSF6-201ENST00000244020 SMARCA5O60264 1052 aaPredicted RBP11.23□□□□□ -0.61
SRSF6-201ENST00000244020 VAMP4O75379 141 aa11.23□□□□□ -0.61
SRSF6-201ENST00000244020 FCHSD2O94868 740 aa11.23□□□□□ -0.61
SRSF6-201ENST00000244020 GOLGA6L6A8MZA4 724 aa11.23□□□□□ -0.61
SRSF6-201ENST00000244020 SIRT2Q8IXJ6 389 aa11.23□□□□□ -0.61
SRSF6-201ENST00000244020 ZNF830Q96NB3 372 aaPredicted RBP11.23□□□□□ -0.61
SRSF6-201ENST00000244020 AK9Q5TCS8 1911 aa11.23□□□□□ -0.61
SRSF6-201ENST00000244020 SDSP20132 328 aa11.23□□□□□ -0.61
SRSF6-201ENST00000244020 ARHGAP45Q92619 1136 aa11.23□□□□□ -0.61
SRSF6-201ENST00000244020 CD109Q6YHK3 1445 aa11.23□□□□□ -0.61
SRSF6-201ENST00000244020 UGGT1Q9NYU2 1555 aa11.23□□□□□ -0.61
SRSF6-201ENST00000244020 ERC2O15083 957 aa11.23□□□□□ -0.61
SRSF6-201ENST00000244020 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.23□□□□□ -0.61
SRSF6-201ENST00000244020 HMGN5P82970 282 aaKnown RBP11.22□□□□□ -0.61
SRSF6-201ENST00000244020 CBX1P83916 185 aa11.22□□□□□ -0.61
SRSF6-201ENST00000244020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.22□□□□□ -0.61
SRSF6-201ENST00000244020 VGFO15240 615 aaPredicted RBP11.22□□□□□ -0.61
SRSF6-201ENST00000244020 NSFL1CQ9UNZ2 370 aaKnown RBP11.22□□□□□ -0.61
SRSF6-201ENST00000244020 OTUD7AQ8TE49 926 aaPredicted RBP11.21□□□□□ -0.61
SRSF6-201ENST00000244020 CCDC94Q9BW85 323 aaPredicted RBP11.21□□□□□ -0.61
SRSF6-201ENST00000244020 GDPD2Q9HCC8 539 aa11.21□□□□□ -0.61
SRSF6-201ENST00000244020 ATAD2Q6PL18 1390 aa11.21□□□□□ -0.61
SRSF6-201ENST00000244020 FYB1O15117 783 aa11.21□□□□□ -0.61
SRSF6-201ENST00000244020 ZNF592Q92610 1267 aa11.21□□□□□ -0.61
SRSF6-201ENST00000244020 SHPRHQ149N8 1683 aa11.21□□□□□ -0.62
SRSF6-201ENST00000244020 TRIM6-TRIM34B2RNG4 842 aa11.21□□□□□ -0.62
SRSF6-201ENST00000244020 FBLN1P23142 703 aa11.21□□□□□ -0.62
SRSF6-201ENST00000244020 TSC1Q92574 1164 aa11.21□□□□□ -0.62
SRSF6-201ENST00000244020 DCTPP1Q9H773 170 aa11.21□□□□□ -0.62
SRSF6-201ENST00000244020 PRDM4Q9UKN5 801 aa11.21□□□□□ -0.62
SRSF6-201ENST00000244020 NFE2L2Q16236 605 aa11.2□□□□□ -0.62
SRSF6-201ENST00000244020 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
SRSF6-201ENST00000244020 USP25Q9UHP3 1055 aa11.2□□□□□ -0.62
SRSF6-201ENST00000244020 ADGRL1O94910 1474 aa11.2□□□□□ -0.62
SRSF6-201ENST00000244020 CYP2E1P05181 493 aaPredicted RBP11.2□□□□□ -0.62
SRSF6-201ENST00000244020 TMX3Q96JJ7 454 aa11.2□□□□□ -0.62
SRSF6-201ENST00000244020 ANO2Q9NQ90 1003 aa11.2□□□□□ -0.62
SRSF6-201ENST00000244020 MBIPQ9NS73 344 aa11.2□□□□□ -0.62
SRSF6-201ENST00000244020 SLC4A10Q6U841 1118 aa11.2□□□□□ -0.62
SRSF6-201ENST00000244020 RILPL2Q969X0 211 aa11.2□□□□□ -0.62
SRSF6-201ENST00000244020 MAP3K4Q9Y6R4 1608 aa11.2□□□□□ -0.62
SRSF6-201ENST00000244020 FAM177BA6PVY3 158 aa11.19□□□□□ -0.62
SRSF6-201ENST00000244020 KIF3AQ9Y496 699 aa11.19□□□□□ -0.62
SRSF6-201ENST00000244020 HMMRO75330 724 aa11.19□□□□□ -0.62
SRSF6-201ENST00000244020 NOLC1Q14978 699 aaKnown RBP eCLIP11.19□□□□□ -0.62
SRSF6-201ENST00000244020 CHMP4AQ9BY43 222 aa11.19□□□□□ -0.62
SRSF6-201ENST00000244020 MYOM2P54296 1465 aa11.19□□□□□ -0.62
SRSF6-201ENST00000244020 ABCA6Q8N139 1617 aa11.19□□□□□ -0.62
SRSF6-201ENST00000244020 PHACTR3Q96KR7 559 aa11.19□□□□□ -0.62
SRSF6-201ENST00000244020 ZDHHC9Q9Y397 364 aa11.19□□□□□ -0.62
SRSF6-201ENST00000244020 MCM2P49736 904 aa11.18□□□□□ -0.62
SRSF6-201ENST00000244020 LMOD3Q0VAK6 560 aa11.18□□□□□ -0.62
SRSF6-201ENST00000244020 MYRIPQ8NFW9 859 aa11.18□□□□□ -0.62
SRSF6-201ENST00000244020 TTC12Q9H892 705 aaPredicted RBP11.18□□□□□ -0.62
SRSF6-201ENST00000244020 A0A1W2PP64 1363 aa11.18□□□□□ -0.62
SRSF6-201ENST00000244020 PPP4R3BQ5MIZ7 849 aa11.18□□□□□ -0.62
SRSF6-201ENST00000244020 C8orf58Q8NAV2 365 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms