RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 GAS2L2Q8NHY3 880 aa17.54■□□□□ 0.4
SF1-201ENST00000227503 CHAMP1Q96JM3 812 aa17.54■□□□□ 0.4
SF1-201ENST00000227503 TERF2IPQ9NYB0 399 aa17.54■□□□□ 0.4
SF1-201ENST00000227503 MINK1Q8N4C8 1332 aaPredicted RBP17.53■□□□□ 0.4
SF1-201ENST00000227503 YTHDC2Q9H6S0 1430 aaKnown RBP17.53■□□□□ 0.4
SF1-201ENST00000227503 CAVIN1Q6NZI2 390 aaKnown RBP17.53■□□□□ 0.4
SF1-201ENST00000227503 ANP32BQ92688 251 aaKnown RBP17.53■□□□□ 0.4
SF1-201ENST00000227503 PREX1Q8TCU6 1659 aa17.53■□□□□ 0.4
SF1-201ENST00000227503 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
SF1-201ENST00000227503 SMC4Q9NTJ3 1288 aa17.53■□□□□ 0.4
SF1-201ENST00000227503 IL16Q14005 1332 aa17.52■□□□□ 0.4
SF1-201ENST00000227503 TRIM27P14373 513 aa17.52■□□□□ 0.4
SF1-201ENST00000227503 KIF2CQ99661 725 aa17.52■□□□□ 0.4
SF1-201ENST00000227503 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.52■□□□□ 0.39
SF1-201ENST00000227503 PNPLA6Q8IY17 1366 aa17.51■□□□□ 0.39
SF1-201ENST00000227503 MCTP1Q6DN14 999 aa17.51■□□□□ 0.39
SF1-201ENST00000227503 MPNDQ8N594 471 aa17.5■□□□□ 0.39
SF1-201ENST00000227503 SKOR2Q2VWA4 1001 aaPredicted RBP17.5■□□□□ 0.39
SF1-201ENST00000227503 RBSNQ9H1K0 784 aa17.5■□□□□ 0.39
SF1-201ENST00000227503 RBM27Q9P2N5 1060 aaKnown RBP17.5■□□□□ 0.39
SF1-201ENST00000227503 TSC1Q92574 1164 aa17.5■□□□□ 0.39
SF1-201ENST00000227503 RBM25P49756 843 aaKnown RBP17.49■□□□□ 0.39
SF1-201ENST00000227503 HDAC1Q13547 482 aaPredicted RBP17.49■□□□□ 0.39
SF1-201ENST00000227503 PKP1Q13835 747 aa17.49■□□□□ 0.39
SF1-201ENST00000227503 BAG4O95429 457 aaKnown RBP17.49■□□□□ 0.39
SF1-201ENST00000227503 ATF7IPQ6VMQ6 1270 aa17.49■□□□□ 0.39
SF1-201ENST00000227503 ARHGEF40Q8TER5 1519 aa17.49■□□□□ 0.39
SF1-201ENST00000227503 DIAPH1O60610 1272 aaKnown RBP17.48■□□□□ 0.39
SF1-201ENST00000227503 SNX21Q969T3 373 aa17.48■□□□□ 0.39
SF1-201ENST00000227503 CDK19Q9BWU1 502 aa17.48■□□□□ 0.39
SF1-201ENST00000227503 ALKQ9UM73 1620 aa17.47■□□□□ 0.39
SF1-201ENST00000227503 NOB1Q9ULX3 412 aaKnown RBP17.47■□□□□ 0.39
SF1-201ENST00000227503 DDX19BQ9UMR2 479 aa17.47■□□□□ 0.39
SF1-201ENST00000227503 FBXO31Q5XUX0 539 aaPredicted RBP17.47■□□□□ 0.39
SF1-201ENST00000227503 PRIM1P49642 420 aaKnown RBP17.46■□□□□ 0.39
SF1-201ENST00000227503 HDGFL2Q7Z4V5 671 aaPredicted RBP17.46■□□□□ 0.39
SF1-201ENST00000227503 TMEM57Q8N5G2 664 aa17.46■□□□□ 0.39
SF1-201ENST00000227503 K7ELQ4 463 aaPredicted RBP17.46■□□□□ 0.39
SF1-201ENST00000227503 CABP1Q9NZU7 370 aa17.46■□□□□ 0.39
SF1-201ENST00000227503 ZSCAN23Q3MJ62 389 aa17.46■□□□□ 0.38
SF1-201ENST00000227503 CIZ1Q9ULV3 898 aaPredicted RBP17.46■□□□□ 0.38
SF1-201ENST00000227503 C1orf115Q9H7X2 142 aa17.45■□□□□ 0.38
SF1-201ENST00000227503 CDC42BPGQ6DT37 1551 aa17.45■□□□□ 0.38
SF1-201ENST00000227503 KLHL40Q2TBA0 621 aa17.45■□□□□ 0.38
SF1-201ENST00000227503 FOXD4L5Q5VV16 416 aaPredicted RBP17.45■□□□□ 0.38
SF1-201ENST00000227503 FOXD4L4Q8WXT5 416 aaPredicted RBP17.45■□□□□ 0.38
SF1-201ENST00000227503 FAM177BA6PVY3 158 aa17.44■□□□□ 0.38
SF1-201ENST00000227503 GOLGA6L22H0YM25 854 aa17.44■□□□□ 0.38
SF1-201ENST00000227503 RNF214Q8ND24 703 aa17.44■□□□□ 0.38
SF1-201ENST00000227503 ZBTB40Q9NUA8 1239 aa17.44■□□□□ 0.38
SF1-201ENST00000227503 KIF20BQ96Q89 1820 aa17.43■□□□□ 0.38
SF1-201ENST00000227503 FCHSD2O94868 740 aa17.43■□□□□ 0.38
SF1-201ENST00000227503 NOL7Q9UMY1 257 aaKnown RBP17.42■□□□□ 0.38
SF1-201ENST00000227503 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
SF1-201ENST00000227503 KIF16BQ96L93 1317 aa17.42■□□□□ 0.38
SF1-201ENST00000227503 ALDH1L2Q3SY69 923 aa17.41■□□□□ 0.38
SF1-201ENST00000227503 ANKRD45Q5TZF3 282 aa17.41■□□□□ 0.38
SF1-201ENST00000227503 TBC1D9Q6ZT07 1266 aa17.41■□□□□ 0.38
SF1-201ENST00000227503 FAM135BQ49AJ0 1406 aa17.41■□□□□ 0.38
SF1-201ENST00000227503 POLKQ9UBT6 870 aa17.41■□□□□ 0.38
SF1-201ENST00000227503 PRPF40AO75400 957 aaKnown RBP17.4■□□□□ 0.38
SF1-201ENST00000227503 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
SF1-201ENST00000227503 IPO8O15397 1037 aaKnown RBP17.4■□□□□ 0.38
SF1-201ENST00000227503 FBLN1P23142 703 aa17.4■□□□□ 0.38
SF1-201ENST00000227503 CHD1LQ86WJ1 897 aa17.4■□□□□ 0.38
SF1-201ENST00000227503 NSFL1CQ9UNZ2 370 aaKnown RBP17.4■□□□□ 0.38
SF1-201ENST00000227503 NUCB1Q02818 461 aa17.39■□□□□ 0.37
SF1-201ENST00000227503 DLC1Q96QB1 1528 aa17.39■□□□□ 0.37
SF1-201ENST00000227503 PRKAR2BP31323 418 aa17.39■□□□□ 0.37
SF1-201ENST00000227503 ATP7BP35670 1465 aa17.38■□□□□ 0.37
SF1-201ENST00000227503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.38■□□□□ 0.37
SF1-201ENST00000227503 LMBRD1Q9NUN5 540 aa17.38■□□□□ 0.37
SF1-201ENST00000227503 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
SF1-201ENST00000227503 SYCE3A1L190 88 aa17.38■□□□□ 0.37
SF1-201ENST00000227503 ZNF500O60304 480 aaPredicted RBP17.38■□□□□ 0.37
SF1-201ENST00000227503 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
SF1-201ENST00000227503 WAPLQ7Z5K2 1190 aa17.38■□□□□ 0.37
SF1-201ENST00000227503 ZKSCAN5Q9Y2L8 839 aa17.38■□□□□ 0.37
SF1-201ENST00000227503 GPT2Q8TD30 523 aa17.38■□□□□ 0.37
SF1-201ENST00000227503 MAP7D2Q96T17 732 aa17.37■□□□□ 0.37
SF1-201ENST00000227503 ZNF445P59923 1031 aa17.37■□□□□ 0.37
SF1-201ENST00000227503 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
SF1-201ENST00000227503 SMAP1Q8IYB5 467 aaPredicted RBP17.36■□□□□ 0.37
SF1-201ENST00000227503 ZGPATQ8N5A5 531 aaKnown RBP17.36■□□□□ 0.37
SF1-201ENST00000227503 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
SF1-201ENST00000227503 TPRNQ4KMQ1 711 aa17.36■□□□□ 0.37
SF1-201ENST00000227503 A2ML1A8K2U0 1454 aa17.35■□□□□ 0.37
SF1-201ENST00000227503 TERF1P54274 439 aa17.35■□□□□ 0.37
SF1-201ENST00000227503 CBX1P83916 185 aa17.35■□□□□ 0.37
SF1-201ENST00000227503 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
SF1-201ENST00000227503 PDLIM2Q96JY6 352 aa17.35■□□□□ 0.37
SF1-201ENST00000227503 ZNF830Q96NB3 372 aaPredicted RBP17.35■□□□□ 0.37
SF1-201ENST00000227503 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
SF1-201ENST00000227503 C17orf53Q8N3J3 647 aaPredicted RBP17.35■□□□□ 0.37
SF1-201ENST00000227503 SETD1AO15047 1707 aaKnown RBP17.35■□□□□ 0.37
SF1-201ENST00000227503 TMEM63CQ9P1W3 806 aa17.34■□□□□ 0.37
SF1-201ENST00000227503 PTMSP20962 102 aa17.34■□□□□ 0.37
SF1-201ENST00000227503 DNTTIP2Q5QJE6 756 aaKnown RBP17.34■□□□□ 0.37
SF1-201ENST00000227503 DYNC1I1O14576 645 aa17.34■□□□□ 0.37
SF1-201ENST00000227503 RIMBP3CA6NJZ7 1639 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms