RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 RTL1A6NKG5 1358 aa14.88□□□□□ -0.03
CTSC-201ENST00000227266 CPDO75976 1380 aa14.88□□□□□ -0.03
CTSC-201ENST00000227266 WDR43Q15061 677 aaKnown RBP eCLIP14.87□□□□□ -0.03
CTSC-201ENST00000227266 PNISRQ8TF01 805 aaKnown RBP14.87□□□□□ -0.03
CTSC-201ENST00000227266 KIF24Q5T7B8 1368 aa14.87□□□□□ -0.03
CTSC-201ENST00000227266 U2SURPO15042 1029 aaKnown RBP14.86□□□□□ -0.03
CTSC-201ENST00000227266 INSRP06213 1382 aa14.86□□□□□ -0.03
CTSC-201ENST00000227266 COL22A1Q8NFW1 1626 aaPredicted RBP14.86□□□□□ -0.03
CTSC-201ENST00000227266 AXIN2Q9Y2T1 843 aa14.86□□□□□ -0.03
CTSC-201ENST00000227266 MAP2P11137 1827 aaKnown RBP14.86□□□□□ -0.03
CTSC-201ENST00000227266 PEAK1Q9H792 1746 aa14.86□□□□□ -0.03
CTSC-201ENST00000227266 CRYBG1Q9Y4K1 1723 aa14.86□□□□□ -0.03
CTSC-201ENST00000227266 EIF4A2Q14240 407 aaKnown RBP14.86□□□□□ -0.03
CTSC-201ENST00000227266 NUDCQ9Y266 331 aa14.86□□□□□ -0.03
CTSC-201ENST00000227266 COL3A1P02461 1466 aaPredicted RBP14.85□□□□□ -0.03
CTSC-201ENST00000227266 FAM83GA6ND36 823 aa14.85□□□□□ -0.03
CTSC-201ENST00000227266 IL13P35225 146 aa14.84□□□□□ -0.03
CTSC-201ENST00000227266 SPATA31A6Q5VVP1 1343 aa14.84□□□□□ -0.03
CTSC-201ENST00000227266 U2AF1L5P0DN76 240 aaPredicted RBP14.84□□□□□ -0.03
CTSC-201ENST00000227266 U2AF1Q01081 240 aaKnown RBP eCLIP14.84□□□□□ -0.03
CTSC-201ENST00000227266 ABCA3Q99758 1704 aa14.83□□□□□ -0.03
CTSC-201ENST00000227266 ANKRD24Q8TF21 1146 aa14.83□□□□□ -0.04
CTSC-201ENST00000227266 ADAMTS8Q9UP79 889 aa14.83□□□□□ -0.04
CTSC-201ENST00000227266 SHPRHQ149N8 1683 aa14.83□□□□□ -0.04
CTSC-201ENST00000227266 BLMP54132 1417 aaPredicted RBP14.82□□□□□ -0.04
CTSC-201ENST00000227266 LTN1O94822 1766 aa14.82□□□□□ -0.04
CTSC-201ENST00000227266 CSB-PGBD3P0DP91 1061 aa14.81□□□□□ -0.04
CTSC-201ENST00000227266 BTG4Q9NY30 223 aa14.8□□□□□ -0.04
CTSC-201ENST00000227266 GTF3C3Q9Y5Q9 886 aa14.8□□□□□ -0.04
CTSC-201ENST00000227266 ERBB3P21860 1342 aa14.8□□□□□ -0.04
CTSC-201ENST00000227266 HMOX1P09601 288 aa14.8□□□□□ -0.04
CTSC-201ENST00000227266 C8orf37Q96NL8 207 aa14.8□□□□□ -0.04
CTSC-201ENST00000227266 EYA1Q99502 592 aa14.8□□□□□ -0.04
CTSC-201ENST00000227266 STRN4Q9NRL3 753 aa14.8□□□□□ -0.04
CTSC-201ENST00000227266 EVA1CP58658 441 aa14.79□□□□□ -0.04
CTSC-201ENST00000227266 MEX3CQ5U5Q3 659 aaKnown RBP14.79□□□□□ -0.04
CTSC-201ENST00000227266 LRP6O75581 1613 aa14.78□□□□□ -0.04
CTSC-201ENST00000227266 NLRP2Q9NX02 1062 aa14.78□□□□□ -0.04
CTSC-201ENST00000227266 CAMTA1Q9Y6Y1 1673 aa14.78□□□□□ -0.04
CTSC-201ENST00000227266 NBPF6Q5VWK0 638 aa14.78□□□□□ -0.04
CTSC-201ENST00000227266 SULT6B1Q6IMI4 303 aa14.78□□□□□ -0.04
CTSC-201ENST00000227266 AEBP1Q8IUX7 1158 aa14.78□□□□□ -0.04
CTSC-201ENST00000227266 CCDC146Q8IYE0 955 aa14.78□□□□□ -0.04
CTSC-201ENST00000227266 USHBP1Q8N6Y0 703 aa14.78□□□□□ -0.04
CTSC-201ENST00000227266 NGLY1Q96IV0 654 aa14.78□□□□□ -0.04
CTSC-201ENST00000227266 NBPF4Q96M43 638 aa14.78□□□□□ -0.04
CTSC-201ENST00000227266 ABCC6O95255 1503 aa14.77□□□□□ -0.04
CTSC-201ENST00000227266 IGSF1Q8N6C5 1336 aa14.77□□□□□ -0.05
CTSC-201ENST00000227266 SENP3-EIF4A1A0A087X0R7 540 aa14.76□□□□□ -0.05
CTSC-201ENST00000227266 COL18A1P39060 1754 aa14.76□□□□□ -0.05
CTSC-201ENST00000227266 COL5A2P05997 1499 aaPredicted RBP14.76□□□□□ -0.05
CTSC-201ENST00000227266 TOM1L2Q6ZVM7 507 aa14.76□□□□□ -0.05
CTSC-201ENST00000227266 WDR17Q8IZU2 1322 aa14.75□□□□□ -0.05
CTSC-201ENST00000227266 LMO7Q8WWI1 1683 aa14.75□□□□□ -0.05
CTSC-201ENST00000227266 FCHSD2O94868 740 aa14.75□□□□□ -0.05
CTSC-201ENST00000227266 LARP1Q6PKG0 1096 aaKnown RBP14.75□□□□□ -0.05
CTSC-201ENST00000227266 COL14A1Q05707 1796 aaKnown RBP14.74□□□□□ -0.05
CTSC-201ENST00000227266 PRKAR2BP31323 418 aa14.74□□□□□ -0.05
CTSC-201ENST00000227266 RSPH6AQ9H0K4 717 aa14.74□□□□□ -0.05
CTSC-201ENST00000227266 USP35Q9P2H5 1018 aa14.73□□□□□ -0.05
CTSC-201ENST00000227266 RUNDC1Q96C34 613 aa14.72□□□□□ -0.05
CTSC-201ENST00000227266 PNNQ9H307 717 aaKnown RBP14.72□□□□□ -0.05
CTSC-201ENST00000227266 SLIT2O94813 1529 aa14.72□□□□□ -0.05
CTSC-201ENST00000227266 NEFMP07197 916 aa14.72□□□□□ -0.05
CTSC-201ENST00000227266 HNRNPUQ00839 825 aaKnown RBP eCLIP14.72□□□□□ -0.05
CTSC-201ENST00000227266 MAPK8IP3Q9UPT6 1336 aa14.72□□□□□ -0.05
CTSC-201ENST00000227266 RGPD5Q99666 1765 aa14.72□□□□□ -0.05
CTSC-201ENST00000227266 UNC5CLQ8IV45 518 aa14.71□□□□□ -0.05
CTSC-201ENST00000227266 FNBP4Q8N3X1 1017 aaPredicted RBP14.71□□□□□ -0.05
CTSC-201ENST00000227266 PLEKHF1Q96S99 279 aa14.71□□□□□ -0.05
CTSC-201ENST00000227266 KDRP35968 1356 aa14.71□□□□□ -0.05
CTSC-201ENST00000227266 APAF1O14727 1248 aa14.7□□□□□ -0.06
CTSC-201ENST00000227266 PHACTR3Q96KR7 559 aa14.7□□□□□ -0.06
CTSC-201ENST00000227266 CARD10Q9BWT7 1032 aa14.7□□□□□ -0.06
CTSC-201ENST00000227266 USP21Q9UK80 565 aa14.7□□□□□ -0.06
CTSC-201ENST00000227266 CCDC9Q9Y3X0 531 aaKnown RBP14.7□□□□□ -0.06
CTSC-201ENST00000227266 RGPD1P0DJD0 1748 aa14.7□□□□□ -0.06
CTSC-201ENST00000227266 SALL2Q9Y467 1007 aaPredicted RBP14.7□□□□□ -0.06
CTSC-201ENST00000227266 AFF2P51816 1311 aa14.7□□□□□ -0.06
CTSC-201ENST00000227266 CRB1P82279 1406 aa14.7□□□□□ -0.06
CTSC-201ENST00000227266 PLCH1Q4KWH8 1693 aa14.69□□□□□ -0.06
CTSC-201ENST00000227266 RAPGEF4Q8WZA2 1011 aa14.69□□□□□ -0.06
CTSC-201ENST00000227266 BCL9LQ86UU0 1499 aa14.69□□□□□ -0.06
CTSC-201ENST00000227266 NEUROD2Q15784 382 aa14.68□□□□□ -0.06
CTSC-201ENST00000227266 TCP11L2Q8N4U5 519 aa14.68□□□□□ -0.06
CTSC-201ENST00000227266 RRP7AQ9Y3A4 280 aaKnown RBP14.68□□□□□ -0.06
CTSC-201ENST00000227266 NCAPD2Q15021 1401 aa14.67□□□□□ -0.06
CTSC-201ENST00000227266 TATP17735 454 aaPredicted RBP14.66□□□□□ -0.06
CTSC-201ENST00000227266 SPATA31A1Q5TZJ5 1347 aa14.66□□□□□ -0.06
CTSC-201ENST00000227266 RGPD2P0DJD1 1756 aa14.66□□□□□ -0.06
CTSC-201ENST00000227266 ILDR1Q86SU0 546 aaPredicted RBP14.66□□□□□ -0.06
CTSC-201ENST00000227266 SPATA31A5Q5VU36 1347 aa14.65□□□□□ -0.06
CTSC-201ENST00000227266 SPATA31A7Q8IWB4 1347 aa14.65□□□□□ -0.06
CTSC-201ENST00000227266 VPS72Q15906 364 aa14.65□□□□□ -0.06
CTSC-201ENST00000227266 FAM208AQ9UK61 1670 aaKnown RBP14.65□□□□□ -0.06
CTSC-201ENST00000227266 IL2RBP14784 551 aa14.64□□□□□ -0.07
CTSC-201ENST00000227266 TMPOP42166 694 aaKnown RBP14.64□□□□□ -0.07
CTSC-201ENST00000227266 NFE2L2Q16236 605 aa14.64□□□□□ -0.07
CTSC-201ENST00000227266 MTHFSDQ2M296 383 aaKnown RBP14.64□□□□□ -0.07
CTSC-201ENST00000227266 NWD2Q9ULI1 1742 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms