RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 ATF3P18847 181 aa8.25□□□□□ -1.09
AFP-201ENST00000226359 MAP3K9P80192 1104 aa8.25□□□□□ -1.09
AFP-201ENST00000226359 SETBP1Q9Y6X0 1596 aa8.25□□□□□ -1.09
AFP-201ENST00000226359 ANKRD30BQ9BXX2 1392 aa8.25□□□□□ -1.09
AFP-201ENST00000226359 DISP3Q9P2K9 1392 aa8.25□□□□□ -1.09
AFP-201ENST00000226359 NPM2Q86SE8 214 aaKnown RBP8.25□□□□□ -1.09
AFP-201ENST00000226359 OXER1Q8TDS5 423 aa8.25□□□□□ -1.09
AFP-201ENST00000226359 KIF1BO60333 1816 aa8.25□□□□□ -1.09
AFP-201ENST00000226359 MYO5BQ9ULV0 1848 aa8.24□□□□□ -1.09
AFP-201ENST00000226359 NEXMIFQ5QGS0 1516 aa8.24□□□□□ -1.09
AFP-201ENST00000226359 HSPA1LP34931 641 aa8.24□□□□□ -1.09
AFP-201ENST00000226359 SMYD5Q6GMV2 418 aa8.24□□□□□ -1.09
AFP-201ENST00000226359 AK7Q96M32 723 aa8.24□□□□□ -1.09
AFP-201ENST00000226359 KDM4CQ9H3R0 1056 aa8.24□□□□□ -1.09
AFP-201ENST00000226359 AMOTL2Q9Y2J4 779 aa8.24□□□□□ -1.09
AFP-201ENST00000226359 SPDYE16A6NNV3 312 aaPredicted RBP8.23□□□□□ -1.09
AFP-201ENST00000226359 LSM11P83369 360 aaKnown RBP eCLIP8.23□□□□□ -1.09
AFP-201ENST00000226359 RGL3Q3MIN7 710 aa8.23□□□□□ -1.09
AFP-201ENST00000226359 STRCP1A6NGW2 1772 aa8.23□□□□□ -1.09
AFP-201ENST00000226359 GRXCR2A6NFK2 248 aa8.22□□□□□ -1.09
AFP-201ENST00000226359 FAM135BQ49AJ0 1406 aa8.22□□□□□ -1.09
AFP-201ENST00000226359 C19orf44Q9H6X5 657 aa8.22□□□□□ -1.09
AFP-201ENST00000226359 DCCP43146 1447 aa8.21□□□□□ -1.1
AFP-201ENST00000226359 KRI1Q8N9T8 703 aaKnown RBP8.21□□□□□ -1.1
AFP-201ENST00000226359 RBM33Q96EV2 1170 aaKnown RBP8.21□□□□□ -1.1
AFP-201ENST00000226359 PTCH1Q13635 1447 aa8.2□□□□□ -1.1
AFP-201ENST00000226359 DDX12PQ92771 950 aa8.2□□□□□ -1.1
AFP-201ENST00000226359 SLAIN2Q9P270 581 aa8.2□□□□□ -1.1
AFP-201ENST00000226359 CHD2O14647 1828 aaKnown RBP8.19□□□□□ -1.1
AFP-201ENST00000226359 GPIHBP1Q8IV16 184 aa8.19□□□□□ -1.1
AFP-201ENST00000226359 METP08581 1390 aa8.19□□□□□ -1.1
AFP-201ENST00000226359 SPATA31E1Q6ZUB1 1445 aa8.19□□□□□ -1.1
AFP-201ENST00000226359 PTPRUQ92729 1446 aa8.19□□□□□ -1.1
AFP-201ENST00000226359 EVI5O60447 810 aa8.19□□□□□ -1.1
AFP-201ENST00000226359 NRXN3Q9Y4C0 1643 aa8.18□□□□□ -1.1
AFP-201ENST00000226359 ADGRL3Q9HAR2 1447 aa8.18□□□□□ -1.1
AFP-201ENST00000226359 XRN1Q8IZH2 1706 aaKnown RBP8.18□□□□□ -1.1
AFP-201ENST00000226359 PTCD2Q8WV60 388 aaKnown RBP8.18□□□□□ -1.1
AFP-201ENST00000226359 STAC3Q96MF2 364 aa8.18□□□□□ -1.1
AFP-201ENST00000226359 ALKQ9UM73 1620 aa8.17□□□□□ -1.1
AFP-201ENST00000226359 TRIM66O15016 1216 aa8.17□□□□□ -1.1
AFP-201ENST00000226359 PBX2P40425 430 aa8.17□□□□□ -1.1
AFP-201ENST00000226359 MYOM2P54296 1465 aa8.17□□□□□ -1.1
AFP-201ENST00000226359 PDE4DQ08499 809 aa8.17□□□□□ -1.1
AFP-201ENST00000226359 ADGRF5Q8IZF2 1346 aa8.16□□□□□ -1.1
AFP-201ENST00000226359 PPLO60437 1756 aa8.16□□□□□ -1.1
AFP-201ENST00000226359 LRPPRCP42704 1394 aaKnown RBP8.16□□□□□ -1.1
AFP-201ENST00000226359 DHX57Q6P158 1386 aaKnown RBP8.16□□□□□ -1.1
AFP-201ENST00000226359 PRAG1Q86YV5 1406 aa8.16□□□□□ -1.1
AFP-201ENST00000226359 TBC1D12O60347 775 aa8.16□□□□□ -1.1
AFP-201ENST00000226359 ROBO1Q9Y6N7 1651 aa8.16□□□□□ -1.1
AFP-201ENST00000226359 JCADQ9P266 1359 aa8.16□□□□□ -1.1
AFP-201ENST00000226359 MED1Q15648 1581 aaPredicted RBP8.16□□□□□ -1.1
AFP-201ENST00000226359 PIK3C2GO75747 1445 aa8.15□□□□□ -1.1
AFP-201ENST00000226359 SLC34A2O95436 690 aa8.15□□□□□ -1.1
AFP-201ENST00000226359 OSBPP22059 807 aa8.15□□□□□ -1.1
AFP-201ENST00000226359 PRIM1P49642 420 aaKnown RBP8.15□□□□□ -1.1
AFP-201ENST00000226359 STK26Q9P289 416 aa8.15□□□□□ -1.1
AFP-201ENST00000226359 XIRP1Q702N8 1843 aaKnown RBP8.15□□□□□ -1.1
AFP-201ENST00000226359 APBB1O00213 710 aa8.15□□□□□ -1.11
AFP-201ENST00000226359 MEX3CQ5U5Q3 659 aaKnown RBP8.15□□□□□ -1.11
AFP-201ENST00000226359 FAM117AQ9C073 453 aa8.15□□□□□ -1.11
AFP-201ENST00000226359 LAMC1P11047 1609 aa8.14□□□□□ -1.11
AFP-201ENST00000226359 ROBO2Q9HCK4 1378 aa8.14□□□□□ -1.11
AFP-201ENST00000226359 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.14□□□□□ -1.11
AFP-201ENST00000226359 GPR37O15354 613 aa8.13□□□□□ -1.11
AFP-201ENST00000226359 GPR153Q6NV75 609 aa8.13□□□□□ -1.11
AFP-201ENST00000226359 ABCC11Q96J66 1382 aa8.13□□□□□ -1.11
AFP-201ENST00000226359 MST1RQ04912 1400 aa8.13□□□□□ -1.11
AFP-201ENST00000226359 YTHDC2Q9H6S0 1430 aaKnown RBP8.13□□□□□ -1.11
AFP-201ENST00000226359 BRINP3Q76B58 766 aa8.13□□□□□ -1.11
AFP-201ENST00000226359 DCAF11Q8TEB1 546 aa8.13□□□□□ -1.11
AFP-201ENST00000226359 C14orf93Q9H972 538 aaKnown RBP8.13□□□□□ -1.11
AFP-201ENST00000226359 POGKQ9P215 609 aa8.13□□□□□ -1.11
AFP-201ENST00000226359 TECPR2O15040 1411 aa8.12□□□□□ -1.11
AFP-201ENST00000226359 ASXL1Q8IXJ9 1541 aa8.12□□□□□ -1.11
AFP-201ENST00000226359 AHDC1Q5TGY3 1603 aaPredicted RBP8.12□□□□□ -1.11
AFP-201ENST00000226359 PHLPP1O60346 1717 aa8.12□□□□□ -1.11
AFP-201ENST00000226359 NUTM2FA1L443 756 aa8.12□□□□□ -1.11
AFP-201ENST00000226359 PCDHGA4Q9Y5G9 962 aa8.12□□□□□ -1.11
AFP-201ENST00000226359 SPATA31A6Q5VVP1 1343 aa8.12□□□□□ -1.11
AFP-201ENST00000226359 NRXN1Q9ULB1 1477 aa8.12□□□□□ -1.11
AFP-201ENST00000226359 TMEM132EQ6IEE7 984 aa8.11□□□□□ -1.11
AFP-201ENST00000226359 EIF3AQ14152 1382 aaKnown RBP8.11□□□□□ -1.11
AFP-201ENST00000226359 C1orf167Q5SNV9 1468 aa8.11□□□□□ -1.11
AFP-201ENST00000226359 IFT172Q9UG01 1749 aa8.11□□□□□ -1.11
AFP-201ENST00000226359 ZNF316A6NFI3 1004 aaPredicted RBP8.11□□□□□ -1.11
AFP-201ENST00000226359 SETD1AO15047 1707 aaKnown RBP8.11□□□□□ -1.11
AFP-201ENST00000226359 CFAP70Q5T0N1 1121 aa8.11□□□□□ -1.11
AFP-201ENST00000226359 CDC42BPGQ6DT37 1551 aa8.11□□□□□ -1.11
AFP-201ENST00000226359 KHSRPQ92945 711 aaKnown RBP eCLIP8.11□□□□□ -1.119e-17■■□□□ 12
AFP-201ENST00000226359 LRRC59Q96AG4 307 aaKnown RBP8.11□□□□□ -1.11
AFP-201ENST00000226359 SIRT1Q96EB6 747 aa8.11□□□□□ -1.11
AFP-201ENST00000226359 IFFO2Q5TF58 517 aa8.1□□□□□ -1.11
AFP-201ENST00000226359 NPHP3Q7Z494 1330 aa8.09□□□□□ -1.11
AFP-201ENST00000226359 ANO8Q9HCE9 1232 aaPredicted RBP8.09□□□□□ -1.11
AFP-201ENST00000226359 KNDC1Q76NI1 1749 aa8.09□□□□□ -1.11
AFP-201ENST00000226359 NALCNQ8IZF0 1738 aa8.09□□□□□ -1.11
AFP-201ENST00000226359 PLEKHG3A1L390 1219 aa8.09□□□□□ -1.11
AFP-201ENST00000226359 ESCO1Q5FWF5 840 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms