RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 IFT140Q96RY7 1462 aa9.81□□□□□ -0.84
SCG3-201ENST00000220478 ATP2B3Q16720 1220 aa9.81□□□□□ -0.84
SCG3-201ENST00000220478 TUBGCP6Q96RT7 1819 aa9.81□□□□□ -0.84
SCG3-201ENST00000220478 CHAMP1Q96JM3 812 aa9.81□□□□□ -0.84
SCG3-201ENST00000220478 ZBTB40Q9NUA8 1239 aa9.81□□□□□ -0.84
SCG3-201ENST00000220478 MAP3K4Q9Y6R4 1608 aa9.81□□□□□ -0.84
SCG3-201ENST00000220478 SASS6Q6UVJ0 657 aa9.81□□□□□ -0.84
SCG3-201ENST00000220478 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
SCG3-201ENST00000220478 MROH2AA6NES4 1674 aa9.8□□□□□ -0.84
SCG3-201ENST00000220478 RBM27Q9P2N5 1060 aaKnown RBP9.8□□□□□ -0.84
SCG3-201ENST00000220478 GTF2F1P35269 517 aaKnown RBP eCLIP9.8□□□□□ -0.84
SCG3-201ENST00000220478 CCDC125Q86Z20 511 aa9.8□□□□□ -0.84
SCG3-201ENST00000220478 DEPDC5O75140 1603 aa9.8□□□□□ -0.84
SCG3-201ENST00000220478 ADGRL1O94910 1474 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 DZIP1LQ8IYY4 767 aaKnown RBP9.79□□□□□ -0.84
SCG3-201ENST00000220478 RUNDC1Q96C34 613 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 STAC3Q96MF2 364 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 TMEM63CQ9P1W3 806 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 DDX49Q9Y6V7 483 aaKnown RBP9.79□□□□□ -0.84
SCG3-201ENST00000220478 PPIP5K1Q6PFW1 1433 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 NEURL4Q96JN8 1562 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 PTMSP20962 102 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 CAVIN1Q6NZI2 390 aaKnown RBP9.79□□□□□ -0.84
SCG3-201ENST00000220478 FBXW7Q969H0 707 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 REREQ9P2R6 1566 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 NCLP19338 710 aaKnown RBP9.79□□□□□ -0.84
SCG3-201ENST00000220478 BMP2KLQ5H9B9 411 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 MTERF4Q7Z6M4 381 aaKnown RBP9.79□□□□□ -0.84
SCG3-201ENST00000220478 MYRIPQ8NFW9 859 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 PTPRTO14522 1441 aa9.79□□□□□ -0.84
SCG3-201ENST00000220478 TSPY4P0CV99 314 aa9.78□□□□□ -0.84
SCG3-201ENST00000220478 TSPY10P0CW01 314 aa9.78□□□□□ -0.84
SCG3-201ENST00000220478 TBC1D9Q6ZT07 1266 aa9.78□□□□□ -0.84
SCG3-201ENST00000220478 MCM5P33992 734 aa9.78□□□□□ -0.84
SCG3-201ENST00000220478 TCHHQ07283 1943 aa9.78□□□□□ -0.84
SCG3-201ENST00000220478 QRICH2Q9H0J4 1663 aa9.78□□□□□ -0.84
SCG3-201ENST00000220478 COL3A1P02461 1466 aaPredicted RBP9.77□□□□□ -0.84
SCG3-201ENST00000220478 ZKSCAN2Q63HK3 967 aa9.77□□□□□ -0.84
SCG3-201ENST00000220478 TMEM51Q9NW97 253 aa9.77□□□□□ -0.85
SCG3-201ENST00000220478 TMEM57Q8N5G2 664 aa9.77□□□□□ -0.85
SCG3-201ENST00000220478 SSH1Q8WYL5 1049 aa9.77□□□□□ -0.85
SCG3-201ENST00000220478 TSR2Q969E8 191 aaKnown RBP9.77□□□□□ -0.85
SCG3-201ENST00000220478 PPP4R3BQ5MIZ7 849 aa9.76□□□□□ -0.85
SCG3-201ENST00000220478 MCTP1Q6DN14 999 aa9.76□□□□□ -0.85
SCG3-201ENST00000220478 CHD1LQ86WJ1 897 aa9.76□□□□□ -0.85
SCG3-201ENST00000220478 LNPKQ9C0E8 428 aa9.76□□□□□ -0.85
SCG3-201ENST00000220478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.76□□□□□ -0.85
SCG3-201ENST00000220478 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.76□□□□□ -0.85
SCG3-201ENST00000220478 NRXN1Q9ULB1 1477 aa9.75□□□□□ -0.85
SCG3-201ENST00000220478 ERCC6Q03468 1493 aa9.75□□□□□ -0.85
SCG3-201ENST00000220478 LRSAM1Q6UWE0 723 aa9.75□□□□□ -0.85
SCG3-201ENST00000220478 TEX2Q8IWB9 1127 aa9.75□□□□□ -0.85
SCG3-201ENST00000220478 SIRT2Q8IXJ6 389 aa9.75□□□□□ -0.85
SCG3-201ENST00000220478 SPDYE4A6NLX3 237 aa9.75□□□□□ -0.85
SCG3-201ENST00000220478 GSPT1P15170 499 aaKnown RBP9.75□□□□□ -0.85
SCG3-201ENST00000220478 IRF5Q13568 498 aa9.75□□□□□ -0.85
SCG3-201ENST00000220478 PLEKHF1Q96S99 279 aa9.75□□□□□ -0.85
SCG3-201ENST00000220478 NSD3Q9BZ95 1437 aa9.75□□□□□ -0.85
SCG3-201ENST00000220478 VWDEQ8N2E2 1590 aa9.74□□□□□ -0.85
SCG3-201ENST00000220478 FAM177BA6PVY3 158 aa9.74□□□□□ -0.85
SCG3-201ENST00000220478 CSPP1Q1MSJ5 1256 aa9.74□□□□□ -0.85
SCG3-201ENST00000220478 ATF7IPQ6VMQ6 1270 aa9.74□□□□□ -0.85
SCG3-201ENST00000220478 TRIM35Q9UPQ4 493 aa9.74□□□□□ -0.85
SCG3-201ENST00000220478 UGGT1Q9NYU2 1555 aa9.74□□□□□ -0.85
SCG3-201ENST00000220478 ZGPATQ8N5A5 531 aaKnown RBP9.74□□□□□ -0.85
SCG3-201ENST00000220478 RETREG2Q8NC44 543 aa9.74□□□□□ -0.85
SCG3-201ENST00000220478 NOB1Q9ULX3 412 aaKnown RBP9.74□□□□□ -0.85
SCG3-201ENST00000220478 KIF16BQ96L93 1317 aa9.74□□□□□ -0.85
SCG3-201ENST00000220478 TET3O43151 1660 aa9.74□□□□□ -0.85
SCG3-201ENST00000220478 CDCA8Q53HL2 280 aa9.74□□□□□ -0.85
SCG3-201ENST00000220478 MYOM2P54296 1465 aa9.74□□□□□ -0.85
SCG3-201ENST00000220478 CBX1P83916 185 aa9.73□□□□□ -0.85
SCG3-201ENST00000220478 KCNV2Q8TDN2 545 aa9.73□□□□□ -0.85
SCG3-201ENST00000220478 GTPBP4Q9BZE4 634 aaKnown RBP9.73□□□□□ -0.85
SCG3-201ENST00000220478 DDX19BQ9UMR2 479 aa9.73□□□□□ -0.85
SCG3-201ENST00000220478 SYCE3A1L190 88 aa9.73□□□□□ -0.85
SCG3-201ENST00000220478 EXOSC9Q06265 439 aaKnown RBP9.73□□□□□ -0.85
SCG3-201ENST00000220478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.73□□□□□ -0.85
SCG3-201ENST00000220478 SBNO2Q9Y2G9 1366 aa9.72□□□□□ -0.85
SCG3-201ENST00000220478 KIF20AO95235 890 aa9.72□□□□□ -0.85
SCG3-201ENST00000220478 ITPRIPQ8IWB1 547 aa9.72□□□□□ -0.85
SCG3-201ENST00000220478 ANKRD26Q9UPS8 1709 aa9.72□□□□□ -0.85
SCG3-201ENST00000220478 PIK3R4Q99570 1358 aa9.72□□□□□ -0.85
SCG3-201ENST00000220478 NKX1-1Q15270 411 aaPredicted RBP9.72□□□□□ -0.85
SCG3-201ENST00000220478 C17orf53Q8N3J3 647 aaPredicted RBP9.72□□□□□ -0.85
SCG3-201ENST00000220478 SMARCA5O60264 1052 aaPredicted RBP9.72□□□□□ -0.85
SCG3-201ENST00000220478 FTSJ3Q8IY81 847 aaKnown RBP9.72□□□□□ -0.85
SCG3-201ENST00000220478 CNPY4Q8N129 248 aa9.72□□□□□ -0.85
SCG3-201ENST00000220478 SPOCK2Q92563 424 aa9.72□□□□□ -0.85
SCG3-201ENST00000220478 SPTLC3Q9NUV7 552 aa9.72□□□□□ -0.85
SCG3-201ENST00000220478 CCDC39Q9UFE4 941 aa9.72□□□□□ -0.85
SCG3-201ENST00000220478 YEATS2Q9ULM3 1422 aa9.72□□□□□ -0.85
SCG3-201ENST00000220478 ADGRB1O14514 1584 aa9.71□□□□□ -0.85
SCG3-201ENST00000220478 PRPF40AO75400 957 aaKnown RBP9.71□□□□□ -0.85
SCG3-201ENST00000220478 CT47B1P0C2W7 299 aaPredicted RBP9.71□□□□□ -0.85
SCG3-201ENST00000220478 HMGN5P82970 282 aaKnown RBP9.71□□□□□ -0.85
SCG3-201ENST00000220478 MROH1Q8NDA8 1641 aa9.71□□□□□ -0.85
SCG3-201ENST00000220478 SETBP1Q9Y6X0 1596 aa9.71□□□□□ -0.86
SCG3-201ENST00000220478 ANKRD7Q92527 254 aa9.71□□□□□ -0.86
SCG3-201ENST00000220478 MRC2Q9UBG0 1479 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms