RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 NEURL4Q96JN8 1562 aa15.29■□□□□ 0.04
MARK3-201ENST00000216288 FOXD4L5Q5VV16 416 aaPredicted RBP15.28■□□□□ 0.04
MARK3-201ENST00000216288 SLC4A10Q6U841 1118 aa15.28■□□□□ 0.04
MARK3-201ENST00000216288 FOXD4L4Q8WXT5 416 aaPredicted RBP15.28■□□□□ 0.04
MARK3-201ENST00000216288 PIK3C2BO00750 1634 aa15.28■□□□□ 0.04
MARK3-201ENST00000216288 VIRMAQ69YN4 1812 aaKnown RBP15.28■□□□□ 0.04
MARK3-201ENST00000216288 NUDT16Q96DE0 195 aaKnown RBP15.28■□□□□ 0.04
MARK3-201ENST00000216288 COG3Q96JB2 828 aa15.28■□□□□ 0.04
MARK3-201ENST00000216288 PUS7Q96PZ0 661 aaKnown RBP15.28■□□□□ 0.04
MARK3-201ENST00000216288 FOXO3O43524 673 aa15.27■□□□□ 0.04
MARK3-201ENST00000216288 SSFA2P28290 1259 aa15.27■□□□□ 0.04
MARK3-201ENST00000216288 ALDH1L2Q3SY69 923 aa15.27■□□□□ 0.04
MARK3-201ENST00000216288 LRRC7Q96NW7 1537 aa15.27■□□□□ 0.04
MARK3-201ENST00000216288 IL16Q14005 1332 aa15.27■□□□□ 0.04
MARK3-201ENST00000216288 GSPT1P15170 499 aaKnown RBP15.27■□□□□ 0.03
MARK3-201ENST00000216288 GNAI1P63096 354 aa15.27■□□□□ 0.03
MARK3-201ENST00000216288 GAS2L2Q8NHY3 880 aa15.27■□□□□ 0.03
MARK3-201ENST00000216288 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.03
MARK3-201ENST00000216288 ADGRB2O60241 1585 aa15.27■□□□□ 0.03
MARK3-201ENST00000216288 F6X3S4 739 aa15.26■□□□□ 0.03
MARK3-201ENST00000216288 GAS2L3Q86XJ1 694 aa15.26■□□□□ 0.03
MARK3-201ENST00000216288 HSP90AB2PQ58FF8 381 aa15.26■□□□□ 0.03
MARK3-201ENST00000216288 WASLO00401 505 aaPredicted RBP15.25■□□□□ 0.03
MARK3-201ENST00000216288 L1TD1Q5T7N2 865 aaKnown RBP15.25■□□□□ 0.03
MARK3-201ENST00000216288 PNPLA6Q8IY17 1366 aa15.25■□□□□ 0.03
MARK3-201ENST00000216288 BMP2KLQ5H9B9 411 aa15.25■□□□□ 0.03
MARK3-201ENST00000216288 FAM43AQ8N2R8 423 aa15.25■□□□□ 0.03
MARK3-201ENST00000216288 NCLP19338 710 aaKnown RBP15.24■□□□□ 0.03
MARK3-201ENST00000216288 PKP1Q13835 747 aa15.24■□□□□ 0.03
MARK3-201ENST00000216288 TPRNQ4KMQ1 711 aa15.24■□□□□ 0.03
MARK3-201ENST00000216288 METP08581 1390 aa15.24■□□□□ 0.03
MARK3-201ENST00000216288 NUTM2GQ5VZR2 741 aa15.24■□□□□ 0.03
MARK3-201ENST00000216288 NOL8Q76FK4 1167 aaKnown RBP15.24■□□□□ 0.03
MARK3-201ENST00000216288 RBM25P49756 843 aaKnown RBP15.23■□□□□ 0.03
MARK3-201ENST00000216288 MEIS3Q99687 375 aa15.23■□□□□ 0.03
MARK3-201ENST00000216288 CFAP44Q96MT7 982 aa15.23■□□□□ 0.03
MARK3-201ENST00000216288 DIP2CQ9Y2E4 1556 aa15.23■□□□□ 0.03
MARK3-201ENST00000216288 FAM135BQ49AJ0 1406 aa15.23■□□□□ 0.03
MARK3-201ENST00000216288 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
MARK3-201ENST00000216288 PLEKHM2Q8IWE5 1019 aa15.22■□□□□ 0.03
MARK3-201ENST00000216288 ARHGEF40Q8TER5 1519 aa15.22■□□□□ 0.03
MARK3-201ENST00000216288 PRKCSHP14314 528 aaPredicted RBP15.21■□□□□ 0.03
MARK3-201ENST00000216288 FOXD4L6Q3SYB3 417 aaPredicted RBP15.21■□□□□ 0.03
MARK3-201ENST00000216288 FOXD4L3Q6VB84 417 aaPredicted RBP15.21■□□□□ 0.03
MARK3-201ENST00000216288 GCC1Q96CN9 775 aa15.21■□□□□ 0.03
MARK3-201ENST00000216288 EIF4A2Q14240 407 aaKnown RBP15.21■□□□□ 0.03
MARK3-201ENST00000216288 G2E3Q7L622 706 aa15.21■□□□□ 0.03
MARK3-201ENST00000216288 NAP1L5Q96NT1 182 aaPredicted RBP15.21■□□□□ 0.03
MARK3-201ENST00000216288 SLC26A8Q96RN1 970 aa15.21■□□□□ 0.03
MARK3-201ENST00000216288 GRPEL1Q9HAV7 217 aa15.21■□□□□ 0.03
MARK3-201ENST00000216288 SLC4A2P04920 1241 aa15.2■□□□□ 0.02
MARK3-201ENST00000216288 ZNF428Q96B54 188 aa15.2■□□□□ 0.02
MARK3-201ENST00000216288 USP32Q8NFA0 1604 aa15.2■□□□□ 0.02
MARK3-201ENST00000216288 PRR36Q9H6K5 1346 aa15.2■□□□□ 0.02
MARK3-201ENST00000216288 FSD2A1L4K1 749 aa15.2■□□□□ 0.02
MARK3-201ENST00000216288 ZNF853P0CG23 659 aa15.2■□□□□ 0.02
MARK3-201ENST00000216288 CCDC61Q9Y6R9 512 aa15.2■□□□□ 0.02
MARK3-201ENST00000216288 ALKQ9UM73 1620 aa15.2■□□□□ 0.02
MARK3-201ENST00000216288 K7ELQ4 463 aaPredicted RBP15.2■□□□□ 0.02
MARK3-201ENST00000216288 DTNBO60941 627 aa15.2■□□□□ 0.02
MARK3-201ENST00000216288 ESF1Q9H501 851 aaKnown RBP15.2■□□□□ 0.02
MARK3-201ENST00000216288 ABCC4O15439 1325 aa15.19■□□□□ 0.02
MARK3-201ENST00000216288 CDC45O75419 566 aa15.19■□□□□ 0.02
MARK3-201ENST00000216288 AK9Q5TCS8 1911 aa15.19■□□□□ 0.02
MARK3-201ENST00000216288 LTV1Q96GA3 475 aaPredicted RBP15.18■□□□□ 0.02
MARK3-201ENST00000216288 EXOC6BQ9Y2D4 811 aa15.18■□□□□ 0.02
MARK3-201ENST00000216288 ZGPATQ8N5A5 531 aaKnown RBP15.18■□□□□ 0.02
MARK3-201ENST00000216288 NCBP3Q53F19 620 aaKnown RBP15.17■□□□□ 0.02
MARK3-201ENST00000216288 API5Q9BZZ5 524 aaKnown RBP15.17■□□□□ 0.02
MARK3-201ENST00000216288 MAP2P11137 1827 aaKnown RBP15.17■□□□□ 0.02
MARK3-201ENST00000216288 RIMS2Q9UQ26 1411 aa15.17■□□□□ 0.02
MARK3-201ENST00000216288 DDX11L8A8MPP1 907 aa15.17■□□□□ 0.02
MARK3-201ENST00000216288 SDSP20132 328 aa15.17■□□□□ 0.02
MARK3-201ENST00000216288 DDIT3P35638 169 aa15.17■□□□□ 0.02
MARK3-201ENST00000216288 MCTP1Q6DN14 999 aa15.17■□□□□ 0.02
MARK3-201ENST00000216288 CALD1Q05682 793 aaKnown RBP15.16■□□□□ 0.02
MARK3-201ENST00000216288 RAB3GAP1Q15042 981 aa15.16■□□□□ 0.02
MARK3-201ENST00000216288 ERBB4Q15303 1308 aa15.16■□□□□ 0.02
MARK3-201ENST00000216288 TMEM131LA2VDJ0 1609 aa15.16■□□□□ 0.02
MARK3-201ENST00000216288 CPS1P31327 1500 aa15.16■□□□□ 0.02
MARK3-201ENST00000216288 CEBPAP49715 358 aaPredicted RBP15.16■□□□□ 0.02
MARK3-201ENST00000216288 SNX21Q969T3 373 aa15.16■□□□□ 0.02
MARK3-201ENST00000216288 GBP4Q96PP9 640 aa15.16■□□□□ 0.02
MARK3-201ENST00000216288 DDX49Q9Y6V7 483 aaKnown RBP15.16■□□□□ 0.02
MARK3-201ENST00000216288 MSH6P52701 1360 aa15.15■□□□□ 0.02
MARK3-201ENST00000216288 CEP85Q6P2H3 762 aa15.15■□□□□ 0.02
MARK3-201ENST00000216288 ARHGAP31Q2M1Z3 1444 aa15.15■□□□□ 0.02
MARK3-201ENST00000216288 TTC22Q5TAA0 569 aa15.15■□□□□ 0.02
MARK3-201ENST00000216288 ARHGAP45Q92619 1136 aa15.15■□□□□ 0.02
MARK3-201ENST00000216288 RBM33Q96EV2 1170 aaKnown RBP15.15■□□□□ 0.02
MARK3-201ENST00000216288 ZMYM3Q14202 1370 aa15.15■□□□□ 0.02
MARK3-201ENST00000216288 ZFYVE9O95405 1425 aa15.14■□□□□ 0.01
MARK3-201ENST00000216288 DCTPP1Q9H773 170 aa15.14■□□□□ 0.01
MARK3-201ENST00000216288 ACEP12821 1306 aa15.14■□□□□ 0.01
MARK3-201ENST00000216288 ZBTB7CA1YPR0 619 aa15.14■□□□□ 0.01
MARK3-201ENST00000216288 MRE11P49959 708 aa15.14■□□□□ 0.01
MARK3-201ENST00000216288 MED14O60244 1454 aa15.14■□□□□ 0.01
MARK3-201ENST00000216288 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.13■□□□□ 0.01
MARK3-201ENST00000216288 TSPYL4Q9UJ04 414 aa15.13■□□□□ 0.01
MARK3-201ENST00000216288 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms