RNA–Protein interactions for RNA: ENST00000210227.4

PTBP3-201, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2

Gene PTBP3, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-201ENST00000210227 ROCK2O75116 1388 aaKnown RBP27.99■■■□□ 2.07
PTBP3-201ENST00000210227 NFAT5O94916 1531 aa27.98■■■□□ 2.07
PTBP3-201ENST00000210227 WDR17Q8IZU2 1322 aa27.98■■■□□ 2.07
PTBP3-201ENST00000210227 DDB1Q16531 1140 aa27.98■■■□□ 2.07
PTBP3-201ENST00000210227 TTC21BQ7Z4L5 1316 aa27.96■■■□□ 2.07
PTBP3-201ENST00000210227 AXIN2Q9Y2T1 843 aa27.96■■■□□ 2.07
PTBP3-201ENST00000210227 CASZ1Q86V15 1759 aa27.95■■■□□ 2.06
PTBP3-201ENST00000210227 ABCC6O95255 1503 aa27.94■■■□□ 2.06
PTBP3-201ENST00000210227 USP54Q70EL1 1684 aa27.94■■■□□ 2.06
PTBP3-201ENST00000210227 ARHGEF25Q86VW2 580 aa27.93■■■□□ 2.06
PTBP3-201ENST00000210227 SIN3AQ96ST3 1273 aa27.93■■■□□ 2.06
PTBP3-201ENST00000210227 ZNF692Q9BU19 519 aaPredicted RBP27.93■■■□□ 2.06
PTBP3-201ENST00000210227 TTC21AQ8NDW8 1320 aa27.92■■■□□ 2.06
PTBP3-201ENST00000210227 KCNH5Q8NCM2 988 aa27.92■■■□□ 2.06
PTBP3-201ENST00000210227 SOX12O15370 315 aa27.91■■■□□ 2.06
PTBP3-201ENST00000210227 BCL9O00512 1426 aa27.91■■■□□ 2.06
PTBP3-201ENST00000210227 KTN1Q86UP2 1357 aaKnown RBP27.9■■■□□ 2.06
PTBP3-201ENST00000210227 PLSCR1O15162 318 aa27.9■■■□□ 2.06
PTBP3-201ENST00000210227 CDCA7Q9BWT1 371 aaPredicted RBP27.9■■■□□ 2.06
PTBP3-201ENST00000210227 LTN1O94822 1766 aa27.89■■■□□ 2.06
PTBP3-201ENST00000210227 BCL11BQ9C0K0 894 aaPredicted RBP27.89■■■□□ 2.06
PTBP3-201ENST00000210227 SPON1Q9HCB6 807 aa27.89■■■□□ 2.06
PTBP3-201ENST00000210227 PTF1AQ7RTS3 328 aa27.88■■■□□ 2.05
PTBP3-201ENST00000210227 MARCH10Q8NA82 808 aaPredicted RBP27.88■■■□□ 2.05
PTBP3-201ENST00000210227 CARD10Q9BWT7 1032 aa27.87■■■□□ 2.05
PTBP3-201ENST00000210227 ANO8Q9HCE9 1232 aaPredicted RBP27.87■■■□□ 2.05
PTBP3-201ENST00000210227 KCNQ2O43526 872 aa27.86■■■□□ 2.05
PTBP3-201ENST00000210227 CSB-PGBD3P0DP91 1061 aa27.86■■■□□ 2.05
PTBP3-201ENST00000210227 NEUROD1Q13562 356 aa27.86■■■□□ 2.05
PTBP3-201ENST00000210227 PPP1R1BQ9UD71 204 aaPredicted RBP27.86■■■□□ 2.05
PTBP3-201ENST00000210227 TNS2Q63HR2 1409 aa27.85■■■□□ 2.05
PTBP3-201ENST00000210227 NHSQ6T4R5 1651 aa27.85■■■□□ 2.05
PTBP3-201ENST00000210227 SBNO2Q9Y2G9 1366 aa27.85■■■□□ 2.05
PTBP3-201ENST00000210227 CCDC7Q96M83 1385 aa27.84■■■□□ 2.05
PTBP3-201ENST00000210227 NINLQ9Y2I6 1382 aa27.84■■■□□ 2.05
PTBP3-201ENST00000210227 CD163L1Q9NR16 1453 aa27.82■■■□□ 2.04
PTBP3-201ENST00000210227 MYOM1P52179 1685 aa27.8■■■□□ 2.04
PTBP3-201ENST00000210227 USP31Q70CQ4 1352 aa27.79■■■□□ 2.04
PTBP3-201ENST00000210227 PROM2Q8N271 834 aa27.78■■■□□ 2.04
PTBP3-201ENST00000210227 EXOC5O00471 708 aa27.77■■■□□ 2.04
PTBP3-201ENST00000210227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.77■■■□□ 2.045e-7■■□□□ 13.5
PTBP3-201ENST00000210227 ERBB3P21860 1342 aa27.75■■■□□ 2.03
PTBP3-201ENST00000210227 BTAF1O14981 1849 aa27.75■■■□□ 2.03
PTBP3-201ENST00000210227 YY1P25490 414 aa27.74■■■□□ 2.03
PTBP3-201ENST00000210227 NME9Q86XW9 330 aa27.74■■■□□ 2.03
PTBP3-201ENST00000210227 PDGFDQ9GZP0 370 aaPredicted RBP27.74■■■□□ 2.03
PTBP3-201ENST00000210227 TXNRD1Q16881 649 aa27.73■■■□□ 2.03
PTBP3-201ENST00000210227 PAPPAQ13219 1627 aa27.72■■■□□ 2.03
PTBP3-201ENST00000210227 CARD11Q9BXL7 1154 aa27.72■■■□□ 2.03
PTBP3-201ENST00000210227 EDC4Q6P2E9 1401 aaKnown RBP27.72■■■□□ 2.03
PTBP3-201ENST00000210227 FAM208AQ9UK61 1670 aaKnown RBP27.72■■■□□ 2.03
PTBP3-201ENST00000210227 ZBTB7AO95365 584 aa27.7■■■□□ 2.02
PTBP3-201ENST00000210227 NLRP2Q9NX02 1062 aa27.7■■■□□ 2.02
PTBP3-201ENST00000210227 KAT6BQ8WYB5 2073 aa27.69■■■□□ 2.02
PTBP3-201ENST00000210227 TMC1Q8TDI8 760 aa27.69■■■□□ 2.02
PTBP3-201ENST00000210227 STK32BQ9NY57 414 aa27.69■■■□□ 2.02
PTBP3-201ENST00000210227 DCAF8L1A6NGE4 600 aa27.68■■■□□ 2.02
PTBP3-201ENST00000210227 HDGFL2Q7Z4V5 671 aaPredicted RBP27.68■■■□□ 2.02
PTBP3-201ENST00000210227 A0A1W2PP64 1363 aa27.67■■■□□ 2.02
PTBP3-201ENST00000210227 UTRNP46939 3433 aa27.66■■■□□ 2.02
PTBP3-201ENST00000210227 SLC15A2Q16348 729 aa27.66■■■□□ 2.02
PTBP3-201ENST00000210227 IL2RBP14784 551 aa27.65■■■□□ 2.02
PTBP3-201ENST00000210227 PTGER2P43116 358 aa27.65■■■□□ 2.02
PTBP3-201ENST00000210227 ANKRD24Q8TF21 1146 aa27.65■■■□□ 2.02
PTBP3-201ENST00000210227 ACSBG1Q96GR2 724 aa27.65■■■□□ 2.02
PTBP3-201ENST00000210227 SLC12A5Q9H2X9 1139 aa27.65■■■□□ 2.02
PTBP3-201ENST00000210227 ATF5Q9Y2D1 282 aaPredicted RBP27.63■■■□□ 2.01
PTBP3-201ENST00000210227 TERF2IPQ9NYB0 399 aa27.62■■■□□ 2.01
PTBP3-201ENST00000210227 TONSLQ96HA7 1378 aa27.61■■■□□ 2.01
PTBP3-201ENST00000210227 MTFR1LQ9H019 292 aa27.59■■■□□ 2.01
PTBP3-201ENST00000210227 QSER1Q2KHR3 1735 aa27.58■■■□□ 2.01
PTBP3-201ENST00000210227 RGPD2P0DJD1 1756 aa27.58■■■□□ 2.01
PTBP3-201ENST00000210227 DOT1LQ8TEK3 1739 aa27.58■■■□□ 2.01
PTBP3-201ENST00000210227 SHANK3Q9BYB0 1731 aa27.57■■■□□ 2
PTBP3-201ENST00000210227 PUS7Q96PZ0 661 aaKnown RBP27.56■■■□□ 2
PTBP3-201ENST00000210227 SGIP1Q9BQI5 828 aa27.55■■■□□ 2
PTBP3-201ENST00000210227 TUBGCP6Q96RT7 1819 aa27.55■■■□□ 2
PTBP3-201ENST00000210227 FHDC1Q9C0D6 1143 aaPredicted RBP27.54■■■□□ 2
PTBP3-201ENST00000210227 CHD4Q14839 1912 aa27.53■■■□□ 2
PTBP3-201ENST00000210227 IP6K1Q92551 441 aa27.53■■■□□ 2
PTBP3-201ENST00000210227 ZNF827Q17R98 1081 aa27.51■■□□□ 1.99
PTBP3-201ENST00000210227 TESK2Q96S53 571 aa27.51■■□□□ 1.99
PTBP3-201ENST00000210227 SYT17Q9BSW7 474 aa27.51■■□□□ 1.99
PTBP3-201ENST00000210227 LY75O60449 1722 aa27.5■■□□□ 1.99
PTBP3-201ENST00000210227 LTV1Q96GA3 475 aaPredicted RBP27.5■■□□□ 1.99
PTBP3-201ENST00000210227 LRRC4BQ9NT99 713 aa27.5■■□□□ 1.99
PTBP3-201ENST00000210227 COL24A1Q17RW2 1714 aa27.5■■□□□ 1.99
PTBP3-201ENST00000210227 DDX54Q8TDD1 881 aaKnown RBP27.48■■□□□ 1.99
PTBP3-201ENST00000210227 MAP3K19Q56UN5 1328 aa27.47■■□□□ 1.99
PTBP3-201ENST00000210227 COG3Q96JB2 828 aa27.47■■□□□ 1.99
PTBP3-201ENST00000210227 ST20-MTHFSA0A0A6YYL1 179 aa27.46■■□□□ 1.99
PTBP3-201ENST00000210227 ARXQ96QS3 562 aa27.46■■□□□ 1.99
PTBP3-201ENST00000210227 MAP3K5Q99683 1374 aa27.46■■□□□ 1.99
PTBP3-201ENST00000210227 HOXC9P31274 260 aa27.45■■□□□ 1.98
PTBP3-201ENST00000210227 MEGF6O75095 1541 aa27.45■■□□□ 1.98
PTBP3-201ENST00000210227 KIF20BQ96Q89 1820 aa27.44■■□□□ 1.98
PTBP3-201ENST00000210227 ANKRD36BQ8N2N9 1353 aa27.44■■□□□ 1.98
PTBP3-201ENST00000210227 SLC27A3Q5K4L6 730 aa27.43■■□□□ 1.98
PTBP3-201ENST00000210227 AKT1S1Q96B36 256 aa27.43■■□□□ 1.98
PTBP3-201ENST00000210227 RTL1A6NKG5 1358 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms