RNA–Protein interactions for RNA: ENST00000204566.6

SPG21-201, Transcript of SPG21, maspardin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG21, Length 1,822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-201ENST00000204566 PHF8Q9UPP1 1060 aa30.84■■■□□ 2.53
SPG21-201ENST00000204566 TMEM94Q12767 1356 aa30.84■■■□□ 2.53
SPG21-201ENST00000204566 MAP2P11137 1827 aaKnown RBP30.83■■■□□ 2.53
SPG21-201ENST00000204566 ZRANB1Q9UGI0 708 aa30.82■■■□□ 2.52
SPG21-201ENST00000204566 PNPLA6Q8IY17 1366 aa30.82■■■□□ 2.52
SPG21-201ENST00000204566 PIK3C2AO00443 1686 aa30.82■■■□□ 2.52
SPG21-201ENST00000204566 C19orf44Q9H6X5 657 aa30.82■■■□□ 2.52
SPG21-201ENST00000204566 USP54Q70EL1 1684 aa30.81■■■□□ 2.52
SPG21-201ENST00000204566 COG6Q9Y2V7 657 aa30.81■■■□□ 2.52
SPG21-201ENST00000204566 CDK12Q9NYV4 1490 aaPredicted RBP30.81■■■□□ 2.52
SPG21-201ENST00000204566 NFKBIBQ15653 356 aa30.8■■■□□ 2.52
SPG21-201ENST00000204566 KIF1AQ12756 1690 aa30.8■■■□□ 2.52
SPG21-201ENST00000204566 USP31Q70CQ4 1352 aa30.78■■■□□ 2.52
SPG21-201ENST00000204566 PANK1Q8TE04 598 aa30.78■■■□□ 2.52
SPG21-201ENST00000204566 POLKQ9UBT6 870 aa30.78■■■□□ 2.52
SPG21-201ENST00000204566 LRRC7Q96NW7 1537 aa30.77■■■□□ 2.52
SPG21-201ENST00000204566 ESCO1Q5FWF5 840 aa30.75■■■□□ 2.51
SPG21-201ENST00000204566 C1orf167Q5SNV9 1468 aa30.75■■■□□ 2.51
SPG21-201ENST00000204566 FRAT1Q92837 279 aaPredicted RBP30.74■■■□□ 2.51
SPG21-201ENST00000204566 RWDD1Q9H446 243 aaPredicted RBP30.74■■■□□ 2.51
SPG21-201ENST00000204566 XIRP1Q702N8 1843 aaKnown RBP30.73■■■□□ 2.51
SPG21-201ENST00000204566 BECN1Q14457 450 aa30.73■■■□□ 2.51
SPG21-201ENST00000204566 DIAPH1O60610 1272 aaKnown RBP30.72■■■□□ 2.51
SPG21-201ENST00000204566 GSE1Q14687 1217 aa30.72■■■□□ 2.51
SPG21-201ENST00000204566 NEUROD2Q15784 382 aa30.72■■■□□ 2.51
SPG21-201ENST00000204566 MST1RQ04912 1400 aa30.72■■■□□ 2.51
SPG21-201ENST00000204566 ATF3P18847 181 aa30.71■■■□□ 2.51
SPG21-201ENST00000204566 RRP7AQ9Y3A4 280 aaKnown RBP30.71■■■□□ 2.51
SPG21-201ENST00000204566 MARF1Q9Y4F3 1742 aaKnown RBP30.71■■■□□ 2.51
SPG21-201ENST00000204566 EMILIN1Q9Y6C2 1016 aa30.7■■■□□ 2.51
SPG21-201ENST00000204566 IL16Q14005 1332 aa30.7■■■□□ 2.51
SPG21-201ENST00000204566 MSH6P52701 1360 aa30.7■■■□□ 2.51
SPG21-201ENST00000204566 U2AF1L5P0DN76 240 aaPredicted RBP30.69■■■□□ 2.5
SPG21-201ENST00000204566 U2AF1Q01081 240 aaKnown RBP eCLIP30.69■■■□□ 2.5
SPG21-201ENST00000204566 FBLN1P23142 703 aa30.68■■■□□ 2.5
SPG21-201ENST00000204566 PNNQ9H307 717 aaKnown RBP30.68■■■□□ 2.5
SPG21-201ENST00000204566 USP19O94966 1318 aa30.68■■■□□ 2.5
SPG21-201ENST00000204566 UPF2Q9HAU5 1272 aaKnown RBP30.68■■■□□ 2.5
SPG21-201ENST00000204566 ZKSCAN2Q63HK3 967 aa30.67■■■□□ 2.5
SPG21-201ENST00000204566 MVPQ14764 893 aaKnown RBP30.66■■■□□ 2.5
SPG21-201ENST00000204566 CADPS2Q86UW7 1296 aa30.66■■■□□ 2.5
SPG21-201ENST00000204566 ORAI2Q96SN7 254 aa30.66■■■□□ 2.5
SPG21-201ENST00000204566 SLC4A3P48751 1232 aa30.66■■■□□ 2.5
SPG21-201ENST00000204566 RRS1Q15050 365 aaKnown RBP30.66■■■□□ 2.5
SPG21-201ENST00000204566 ZNF335Q9H4Z2 1342 aaPredicted RBP30.66■■■□□ 2.5
SPG21-201ENST00000204566 U2SURPO15042 1029 aaKnown RBP30.65■■■□□ 2.5
SPG21-201ENST00000204566 PSME1Q06323 249 aa30.65■■■□□ 2.5
SPG21-201ENST00000204566 NLRP6P59044 892 aa30.63■■■□□ 2.49
SPG21-201ENST00000204566 TRPM3Q9HCF6 1732 aaPredicted RBP30.63■■■□□ 2.49
SPG21-201ENST00000204566 PEAK1Q9H792 1746 aa30.62■■■□□ 2.49
SPG21-201ENST00000204566 RLBP1P12271 317 aa30.62■■■□□ 2.49
SPG21-201ENST00000204566 ABTB2Q8N961 1025 aa30.62■■■□□ 2.49
SPG21-201ENST00000204566 PCDHB15Q9Y5E8 787 aa30.62■■■□□ 2.49
SPG21-201ENST00000204566 DZIP1LQ8IYY4 767 aaKnown RBP30.61■■■□□ 2.49
SPG21-201ENST00000204566 PLEKHF1Q96S99 279 aa30.61■■■□□ 2.49
SPG21-201ENST00000204566 FTSJ3Q8IY81 847 aaKnown RBP30.59■■■□□ 2.49
SPG21-201ENST00000204566 PDZRN3Q9UPQ7 1066 aa30.59■■■□□ 2.49
SPG21-201ENST00000204566 FOXO3O43524 673 aa30.57■■■□□ 2.48
SPG21-201ENST00000204566 IL13P35225 146 aa30.57■■■□□ 2.48
SPG21-201ENST00000204566 TMPOP42166 694 aaKnown RBP30.57■■■□□ 2.48
SPG21-201ENST00000204566 SBNO1A3KN83 1393 aa30.56■■■□□ 2.48
SPG21-201ENST00000204566 KIF24Q5T7B8 1368 aa30.55■■■□□ 2.48
SPG21-201ENST00000204566 DDX19BQ9UMR2 479 aa30.55■■■□□ 2.48
SPG21-201ENST00000204566 FLT4P35916 1363 aa30.54■■■□□ 2.48
SPG21-201ENST00000204566 HDAC1Q13547 482 aaPredicted RBP30.54■■■□□ 2.48
SPG21-201ENST00000204566 TBC1D32Q96NH3 1257 aa30.54■■■□□ 2.48
SPG21-201ENST00000204566 MAP3K19Q56UN5 1328 aa30.54■■■□□ 2.48
SPG21-201ENST00000204566 SOX12O15370 315 aa30.54■■■□□ 2.48
SPG21-201ENST00000204566 FCHSD2O94868 740 aa30.52■■■□□ 2.48
SPG21-201ENST00000204566 NUTM2GQ5VZR2 741 aa30.52■■■□□ 2.48
SPG21-201ENST00000204566 NFAT5O94916 1531 aa30.51■■■□□ 2.48
SPG21-201ENST00000204566 KRT28Q7Z3Y7 464 aa30.51■■■□□ 2.47
SPG21-201ENST00000204566 ZNF428Q96B54 188 aa30.51■■■□□ 2.47
SPG21-201ENST00000204566 BCL2L13Q9BXK5 485 aa30.51■■■□□ 2.47
SPG21-201ENST00000204566 SMC4Q9NTJ3 1288 aa30.51■■■□□ 2.47
SPG21-201ENST00000204566 ALS2Q96Q42 1657 aa30.51■■■□□ 2.47
SPG21-201ENST00000204566 KIF16BQ96L93 1317 aa30.51■■■□□ 2.47
SPG21-201ENST00000204566 SLIT3O75094 1523 aa30.5■■■□□ 2.47
SPG21-201ENST00000204566 TRIM35Q9UPQ4 493 aa30.5■■■□□ 2.47
SPG21-201ENST00000204566 RGPD1P0DJD0 1748 aa30.49■■■□□ 2.47
SPG21-201ENST00000204566 SEC24BO95487 1268 aa30.49■■■□□ 2.47
SPG21-201ENST00000204566 RSPH6AQ9H0K4 717 aa30.49■■■□□ 2.47
SPG21-201ENST00000204566 LTN1O94822 1766 aa30.48■■■□□ 2.47
SPG21-201ENST00000204566 IPO8O15397 1037 aaKnown RBP30.48■■■□□ 2.47
SPG21-201ENST00000204566 RTL1A6NKG5 1358 aa30.48■■■□□ 2.47
SPG21-201ENST00000204566 XPCQ01831 940 aaPredicted RBP30.47■■■□□ 2.47
SPG21-201ENST00000204566 EIF4A2Q14240 407 aaKnown RBP30.47■■■□□ 2.47
SPG21-201ENST00000204566 ATF7IPQ6VMQ6 1270 aa30.47■■■□□ 2.47
SPG21-201ENST00000204566 TNNQ9UQP3 1299 aa30.47■■■□□ 2.47
SPG21-201ENST00000204566 NPHP3Q7Z494 1330 aa30.47■■■□□ 2.47
SPG21-201ENST00000204566 FRAT2O75474 233 aaPredicted RBP30.47■■■□□ 2.47
SPG21-201ENST00000204566 EXOSC9Q06265 439 aaKnown RBP30.47■■■□□ 2.47
SPG21-201ENST00000204566 ALDH1L2Q3SY69 923 aa30.47■■■□□ 2.47
SPG21-201ENST00000204566 PHRF1Q9P1Y6 1649 aaKnown RBP30.47■■■□□ 2.47
SPG21-201ENST00000204566 KCNH5Q8NCM2 988 aa30.46■■■□□ 2.47
SPG21-201ENST00000204566 AMPHP49418 695 aa30.45■■■□□ 2.47
SPG21-201ENST00000204566 HSP90AB2PQ58FF8 381 aa30.45■■■□□ 2.46
SPG21-201ENST00000204566 TRIM27P14373 513 aa30.44■■■□□ 2.46
SPG21-201ENST00000204566 PRKAR2BP31323 418 aa30.43■■■□□ 2.46
SPG21-201ENST00000204566 BRPF1P55201 1214 aaPredicted RBP30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms