RNA–Protein interactions for RNA: ENST00000204005.13

LTBP4-201, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 5,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-201ENST00000204005 WASHC4Q2M389 1173 aa23.03■■□□□ 1.28
LTBP4-201ENST00000204005 MCM10Q7L590 875 aa23.03■■□□□ 1.28
LTBP4-201ENST00000204005 ANKRD36BQ8N2N9 1353 aa23.02■■□□□ 1.28
LTBP4-201ENST00000204005 LRRCC1Q9C099 1032 aa23.02■■□□□ 1.28
LTBP4-201ENST00000204005 ALDH1L2Q3SY69 923 aa23.02■■□□□ 1.28
LTBP4-201ENST00000204005 IL27Q8NEV9 243 aa23.02■■□□□ 1.28
LTBP4-201ENST00000204005 NKTRP30414 1462 aaKnown RBP23.02■■□□□ 1.28
LTBP4-201ENST00000204005 FOXO3O43524 673 aa23.02■■□□□ 1.28
LTBP4-201ENST00000204005 TRIM29Q14134 588 aa23.02■■□□□ 1.28
LTBP4-201ENST00000204005 RPAP2Q8IXW5 612 aaPredicted RBP23.02■■□□□ 1.28
LTBP4-201ENST00000204005 HIP1O00291 1037 aa23.01■■□□□ 1.27
LTBP4-201ENST00000204005 DNMT1P26358 1616 aaKnown RBP23.01■■□□□ 1.27
LTBP4-201ENST00000204005 TMEM57Q8N5G2 664 aa23.01■■□□□ 1.27
LTBP4-201ENST00000204005 DUSP27Q5VZP5 1158 aa23.01■■□□□ 1.27
LTBP4-201ENST00000204005 RBM33Q96EV2 1170 aaKnown RBP23.01■■□□□ 1.27
LTBP4-201ENST00000204005 SSH1Q8WYL5 1049 aa23■■□□□ 1.27
LTBP4-201ENST00000204005 CLSTN1O94985 981 aa23■■□□□ 1.27
LTBP4-201ENST00000204005 RALYLQ86SE5 291 aaKnown RBP23■■□□□ 1.27
LTBP4-201ENST00000204005 CHD1LQ86WJ1 897 aa22.99■■□□□ 1.27
LTBP4-201ENST00000204005 SAMD9Q5K651 1589 aa22.99■■□□□ 1.27
LTBP4-201ENST00000204005 DCTN1Q14203 1278 aa22.99■■□□□ 1.27
LTBP4-201ENST00000204005 AMOTQ4VCS5 1084 aa22.99■■□□□ 1.27
LTBP4-201ENST00000204005 TTC21BQ7Z4L5 1316 aa22.99■■□□□ 1.27
LTBP4-201ENST00000204005 MARCH6O60337 910 aa22.99■■□□□ 1.27
LTBP4-201ENST00000204005 PSMA5P28066 241 aa22.99■■□□□ 1.27
LTBP4-201ENST00000204005 FAM43AQ8N2R8 423 aa22.99■■□□□ 1.27
LTBP4-201ENST00000204005 MYL6BP14649 208 aa22.98■■□□□ 1.27
LTBP4-201ENST00000204005 RABEP1Q15276 862 aa22.98■■□□□ 1.27
LTBP4-201ENST00000204005 VPS37CA5D8V6 355 aaPredicted RBP22.97■■□□□ 1.27
LTBP4-201ENST00000204005 ACEP12821 1306 aa22.97■■□□□ 1.27
LTBP4-201ENST00000204005 ERICH2A1L162 156 aa22.97■■□□□ 1.27
LTBP4-201ENST00000204005 TAF7Q15545 349 aaPredicted RBP22.97■■□□□ 1.27
LTBP4-201ENST00000204005 AMER1Q5JTC6 1135 aaPredicted RBP22.97■■□□□ 1.27
LTBP4-201ENST00000204005 MIS18AQ9NYP9 233 aa22.97■■□□□ 1.27
LTBP4-201ENST00000204005 NFXL1Q6ZNB6 911 aa22.96■■□□□ 1.27
LTBP4-201ENST00000204005 SKAP1Q86WV1 359 aa22.96■■□□□ 1.27
LTBP4-201ENST00000204005 ARHGEF12Q9NZN5 1544 aa22.96■■□□□ 1.27
LTBP4-201ENST00000204005 NUTM2BA6NNL0 878 aaPredicted RBP22.96■■□□□ 1.27
LTBP4-201ENST00000204005 FAM177BA6PVY3 158 aa22.96■■□□□ 1.27
LTBP4-201ENST00000204005 NUTM2EB1AL46 878 aaPredicted RBP22.96■■□□□ 1.27
LTBP4-201ENST00000204005 NASPP49321 788 aaPredicted RBP22.96■■□□□ 1.27
LTBP4-201ENST00000204005 NUTM2AQ8IVF1 878 aaPredicted RBP22.96■■□□□ 1.27
LTBP4-201ENST00000204005 TBC1D2BQ9UPU7 963 aa22.95■■□□□ 1.26
LTBP4-201ENST00000204005 ADGRL2O95490 1459 aa22.95■■□□□ 1.26
LTBP4-201ENST00000204005 DNAJC2Q99543 621 aaKnown RBP22.95■■□□□ 1.26
LTBP4-201ENST00000204005 RIMS2Q9UQ26 1411 aa22.95■■□□□ 1.26
LTBP4-201ENST00000204005 SRGAP3O43295 1099 aa22.95■■□□□ 1.26
LTBP4-201ENST00000204005 PUS7Q96PZ0 661 aaKnown RBP22.95■■□□□ 1.26
LTBP4-201ENST00000204005 PZPP20742 1482 aa22.95■■□□□ 1.26
LTBP4-201ENST00000204005 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.94■■□□□ 1.26
LTBP4-201ENST00000204005 EIF2AK4Q9P2K8 1649 aaKnown RBP22.94■■□□□ 1.26
LTBP4-201ENST00000204005 MCM2P49736 904 aa22.94■■□□□ 1.26
LTBP4-201ENST00000204005 TESK2Q96S53 571 aa22.93■■□□□ 1.26
LTBP4-201ENST00000204005 ASXL1Q8IXJ9 1541 aa22.93■■□□□ 1.26
LTBP4-201ENST00000204005 LRPPRCP42704 1394 aaKnown RBP22.93■■□□□ 1.26
LTBP4-201ENST00000204005 NEK4P51957 841 aa22.93■■□□□ 1.26
LTBP4-201ENST00000204005 TRIM34Q9BYJ4 488 aa22.93■■□□□ 1.26
LTBP4-201ENST00000204005 USHBP1Q8N6Y0 703 aa22.92■■□□□ 1.26
LTBP4-201ENST00000204005 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.92■■□□□ 1.26
LTBP4-201ENST00000204005 GOLGA6L19H0YKK7 550 aa22.91■■□□□ 1.26
LTBP4-201ENST00000204005 FYB1O15117 783 aa22.91■■□□□ 1.26
LTBP4-201ENST00000204005 CNNM1Q9NRU3 951 aa22.91■■□□□ 1.26
LTBP4-201ENST00000204005 CEP170Q5SW79 1584 aa22.91■■□□□ 1.26
LTBP4-201ENST00000204005 BECN2A8MW95 431 aa22.91■■□□□ 1.26
LTBP4-201ENST00000204005 CCDC158Q5M9N0 1113 aa22.91■■□□□ 1.26
LTBP4-201ENST00000204005 SIL1Q9H173 461 aa22.9■■□□□ 1.26
LTBP4-201ENST00000204005 CCDC27Q2M243 656 aa22.89■■□□□ 1.26
LTBP4-201ENST00000204005 BICD2Q8TD16 824 aa22.89■■□□□ 1.26
LTBP4-201ENST00000204005 FBXW7Q969H0 707 aa22.89■■□□□ 1.26
LTBP4-201ENST00000204005 KRT28Q7Z3Y7 464 aa22.89■■□□□ 1.25
LTBP4-201ENST00000204005 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.25
LTBP4-201ENST00000204005 MCM4P33991 863 aa22.89■■□□□ 1.25
LTBP4-201ENST00000204005 VPS53Q5VIR6 699 aa22.89■■□□□ 1.25
LTBP4-201ENST00000204005 IL16Q14005 1332 aa22.88■■□□□ 1.25
LTBP4-201ENST00000204005 PARD3Q8TEW0 1356 aa22.88■■□□□ 1.25
LTBP4-201ENST00000204005 TTC21AQ8NDW8 1320 aa22.88■■□□□ 1.25
LTBP4-201ENST00000204005 K7ELQ4 463 aaPredicted RBP22.88■■□□□ 1.25
LTBP4-201ENST00000204005 CAVIN1Q6NZI2 390 aaKnown RBP22.87■■□□□ 1.25
LTBP4-201ENST00000204005 CCDC57Q2TAC2 916 aa22.87■■□□□ 1.25
LTBP4-201ENST00000204005 CIZ1Q9ULV3 898 aaPredicted RBP22.87■■□□□ 1.25
LTBP4-201ENST00000204005 MBD3O95983 291 aa22.87■■□□□ 1.25
LTBP4-201ENST00000204005 CREBRFQ8IUR6 639 aa22.87■■□□□ 1.25
LTBP4-201ENST00000204005 SAFBQ15424 915 aaKnown RBP eCLIP22.86■■□□□ 1.25
LTBP4-201ENST00000204005 TTC39AQ5SRH9 613 aa22.86■■□□□ 1.25
LTBP4-201ENST00000204005 CADPS2Q86UW7 1296 aa22.86■■□□□ 1.25
LTBP4-201ENST00000204005 AACSQ86V21 672 aa22.84■■□□□ 1.25
LTBP4-201ENST00000204005 DHX16O60231 1041 aaKnown RBP22.84■■□□□ 1.25
LTBP4-201ENST00000204005 STARD3NLO95772 234 aa22.84■■□□□ 1.25
LTBP4-201ENST00000204005 LARP1Q6PKG0 1096 aaKnown RBP22.84■■□□□ 1.25
LTBP4-201ENST00000204005 PPIP5K1Q6PFW1 1433 aa22.84■■□□□ 1.25
LTBP4-201ENST00000204005 RAD21O60216 631 aa22.84■■□□□ 1.25
LTBP4-201ENST00000204005 CWC22Q9HCG8 908 aaKnown RBP22.84■■□□□ 1.25
LTBP4-201ENST00000204005 IL1RAPL2Q9NP60 686 aa22.84■■□□□ 1.25
LTBP4-201ENST00000204005 TPD52L1Q16890 204 aaPredicted RBP22.83■■□□□ 1.25
LTBP4-201ENST00000204005 MPRIPQ6WCQ1 1025 aa22.83■■□□□ 1.25
LTBP4-201ENST00000204005 ATP7AQ04656 1500 aa22.83■■□□□ 1.24
LTBP4-201ENST00000204005 PIP4K2BP78356 416 aa22.83■■□□□ 1.24
LTBP4-201ENST00000204005 PRPF40AO75400 957 aaKnown RBP22.82■■□□□ 1.24
LTBP4-201ENST00000204005 TRIM27P14373 513 aa22.82■■□□□ 1.24
LTBP4-201ENST00000204005 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.82■■□□□ 1.245e-10■■■■□ 24.3
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms