RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 CDC45O75419 566 aa14.05□□□□□ -0.16
DNMT3B-201ENST00000201963 CLCN1P35523 988 aa14.05□□□□□ -0.16
DNMT3B-201ENST00000201963 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
DNMT3B-201ENST00000201963 INTS3Q68E01 1043 aaKnown RBP14.04□□□□□ -0.16
DNMT3B-201ENST00000201963 C1orf115Q9H7X2 142 aa14.04□□□□□ -0.16
DNMT3B-201ENST00000201963 KAT6BQ8WYB5 2073 aa14.03□□□□□ -0.16
DNMT3B-201ENST00000201963 K7ELQ4 463 aaPredicted RBP14.03□□□□□ -0.16
DNMT3B-201ENST00000201963 ABCA9Q8IUA7 1624 aa14.03□□□□□ -0.16
DNMT3B-201ENST00000201963 C1orf141Q5JVX7 400 aa14.03□□□□□ -0.16
DNMT3B-201ENST00000201963 STK31Q9BXU1 1019 aa14.03□□□□□ -0.16
DNMT3B-201ENST00000201963 RRAGDQ9NQL2 400 aaPredicted RBP14.03□□□□□ -0.16
DNMT3B-201ENST00000201963 MVPQ14764 893 aaKnown RBP14.03□□□□□ -0.16
DNMT3B-201ENST00000201963 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.16
DNMT3B-201ENST00000201963 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.16
DNMT3B-201ENST00000201963 ACEP12821 1306 aa14.02□□□□□ -0.16
DNMT3B-201ENST00000201963 TMEM94Q12767 1356 aa14.02□□□□□ -0.16
DNMT3B-201ENST00000201963 PDCL3Q9H2J4 239 aa14.02□□□□□ -0.16
DNMT3B-201ENST00000201963 SF3B2Q13435 895 aaKnown RBP14.02□□□□□ -0.17
DNMT3B-201ENST00000201963 ATP6V1DQ9Y5K8 247 aa14.01□□□□□ -0.17
DNMT3B-201ENST00000201963 WWC1Q8IX03 1113 aa14.01□□□□□ -0.17
DNMT3B-201ENST00000201963 NPHP3Q7Z494 1330 aa14.01□□□□□ -0.17
DNMT3B-201ENST00000201963 UGGT1Q9NYU2 1555 aa14□□□□□ -0.17
DNMT3B-201ENST00000201963 PRDM10Q9NQV6 1147 aa14□□□□□ -0.17
DNMT3B-201ENST00000201963 ARAP3Q8WWN8 1544 aa14□□□□□ -0.17
DNMT3B-201ENST00000201963 CDC42BPAQ5VT25 1732 aa14□□□□□ -0.17
DNMT3B-201ENST00000201963 NEK4P51957 841 aa14□□□□□ -0.17
DNMT3B-201ENST00000201963 TBC1D32Q96NH3 1257 aa14□□□□□ -0.17
DNMT3B-201ENST00000201963 MBD3O95983 291 aa14□□□□□ -0.17
DNMT3B-201ENST00000201963 TNPO1Q92973 898 aaKnown RBP14□□□□□ -0.17
DNMT3B-201ENST00000201963 NOB1Q9ULX3 412 aaKnown RBP14□□□□□ -0.17
DNMT3B-201ENST00000201963 HTATSF1O43719 755 aaKnown RBP13.99□□□□□ -0.17
DNMT3B-201ENST00000201963 DIAPH1O60610 1272 aaKnown RBP13.99□□□□□ -0.17
DNMT3B-201ENST00000201963 LMOD3Q0VAK6 560 aa13.99□□□□□ -0.17
DNMT3B-201ENST00000201963 TEFQ10587 303 aa13.99□□□□□ -0.17
DNMT3B-201ENST00000201963 RABEP1Q15276 862 aa13.99□□□□□ -0.17
DNMT3B-201ENST00000201963 API5Q9BZZ5 524 aaKnown RBP13.99□□□□□ -0.17
DNMT3B-201ENST00000201963 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
DNMT3B-201ENST00000201963 USHBP1Q8N6Y0 703 aa13.99□□□□□ -0.17
DNMT3B-201ENST00000201963 DIAPH3Q9NSV4 1193 aa13.99□□□□□ -0.17
DNMT3B-201ENST00000201963 IFT57Q9NWB7 429 aa13.98□□□□□ -0.17
DNMT3B-201ENST00000201963 HMGN5P82970 282 aaKnown RBP13.98□□□□□ -0.17
DNMT3B-201ENST00000201963 ATF7IPQ6VMQ6 1270 aa13.98□□□□□ -0.17
DNMT3B-201ENST00000201963 NPHP4O75161 1426 aaPredicted RBP13.98□□□□□ -0.17
DNMT3B-201ENST00000201963 GOLGA6L19H0YKK7 550 aa13.98□□□□□ -0.17
DNMT3B-201ENST00000201963 SEC24BO95487 1268 aa13.98□□□□□ -0.17
DNMT3B-201ENST00000201963 LRPPRCP42704 1394 aaKnown RBP13.97□□□□□ -0.17
DNMT3B-201ENST00000201963 PZPP20742 1482 aa13.97□□□□□ -0.17
DNMT3B-201ENST00000201963 RNF123Q5XPI4 1314 aa13.97□□□□□ -0.17
DNMT3B-201ENST00000201963 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.97□□□□□ -0.17
DNMT3B-201ENST00000201963 RARSP54136 660 aaKnown RBP13.97□□□□□ -0.17
DNMT3B-201ENST00000201963 TSPY26PQ9H489 355 aa13.97□□□□□ -0.17
DNMT3B-201ENST00000201963 NINLQ9Y2I6 1382 aa13.97□□□□□ -0.17
DNMT3B-201ENST00000201963 ADGRL2O95490 1459 aa13.97□□□□□ -0.17
DNMT3B-201ENST00000201963 VPS37CA5D8V6 355 aaPredicted RBP13.97□□□□□ -0.17
DNMT3B-201ENST00000201963 BECN2A8MW95 431 aa13.97□□□□□ -0.17
DNMT3B-201ENST00000201963 NECTIN2Q92692 538 aa13.97□□□□□ -0.17
DNMT3B-201ENST00000201963 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.17
DNMT3B-201ENST00000201963 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.17
DNMT3B-201ENST00000201963 PTPRMP28827 1452 aa13.96□□□□□ -0.17
DNMT3B-201ENST00000201963 SSFA2P28290 1259 aa13.96□□□□□ -0.17
DNMT3B-201ENST00000201963 CHD1LQ86WJ1 897 aa13.96□□□□□ -0.17
DNMT3B-201ENST00000201963 LRRC59Q96AG4 307 aaKnown RBP13.96□□□□□ -0.17
DNMT3B-201ENST00000201963 ARHGEF5Q12774 1597 aa13.96□□□□□ -0.18
DNMT3B-201ENST00000201963 PPP1R1BQ9UD71 204 aaPredicted RBP13.95□□□□□ -0.18
DNMT3B-201ENST00000201963 SYCE3A1L190 88 aa13.94□□□□□ -0.18
DNMT3B-201ENST00000201963 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
DNMT3B-201ENST00000201963 KDM5DQ9BY66 1539 aa13.94□□□□□ -0.18
DNMT3B-201ENST00000201963 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
DNMT3B-201ENST00000201963 METP08581 1390 aa13.94□□□□□ -0.18
DNMT3B-201ENST00000201963 CDC42BPBQ9Y5S2 1711 aa13.93□□□□□ -0.18
DNMT3B-201ENST00000201963 SULT6B1Q6IMI4 303 aa13.93□□□□□ -0.18
DNMT3B-201ENST00000201963 SMC3Q9UQE7 1217 aa13.93□□□□□ -0.18
DNMT3B-201ENST00000201963 SPC24Q8NBT2 197 aa13.93□□□□□ -0.18
DNMT3B-201ENST00000201963 GCC1Q96CN9 775 aa13.93□□□□□ -0.18
DNMT3B-201ENST00000201963 NKTRP30414 1462 aaKnown RBP13.93□□□□□ -0.18
DNMT3B-201ENST00000201963 ERVK-7P63135 1459 aa13.93□□□□□ -0.18
DNMT3B-201ENST00000201963 CCDC27Q2M243 656 aa13.93□□□□□ -0.18
DNMT3B-201ENST00000201963 TMEM57Q8N5G2 664 aa13.93□□□□□ -0.18
DNMT3B-201ENST00000201963 CERKQ8TCT0 537 aa13.93□□□□□ -0.18
DNMT3B-201ENST00000201963 PCDHB15Q9Y5E8 787 aa13.93□□□□□ -0.18
DNMT3B-201ENST00000201963 GTF2E1P29083 439 aaPredicted RBP13.92□□□□□ -0.18
DNMT3B-201ENST00000201963 ZHX1Q9UKY1 873 aaPredicted RBP13.92□□□□□ -0.18
DNMT3B-201ENST00000201963 MAST1Q9Y2H9 1570 aa13.92□□□□□ -0.18
DNMT3B-201ENST00000201963 FIBPO43427 364 aa13.92□□□□□ -0.18
DNMT3B-201ENST00000201963 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
DNMT3B-201ENST00000201963 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
DNMT3B-201ENST00000201963 EMILIN1Q9Y6C2 1016 aa13.92□□□□□ -0.18
DNMT3B-201ENST00000201963 TATP17735 454 aaPredicted RBP13.92□□□□□ -0.18
DNMT3B-201ENST00000201963 EIF2S2P20042 333 aaKnown RBP13.92□□□□□ -0.18
DNMT3B-201ENST00000201963 BICD2Q8TD16 824 aa13.91□□□□□ -0.18
DNMT3B-201ENST00000201963 PLEKHH1Q9ULM0 1364 aa13.91□□□□□ -0.18
DNMT3B-201ENST00000201963 CWC22Q9HCG8 908 aaKnown RBP13.91□□□□□ -0.18
DNMT3B-201ENST00000201963 SCAF11Q99590 1463 aaKnown RBP13.91□□□□□ -0.18
DNMT3B-201ENST00000201963 GNAI1P63096 354 aa13.91□□□□□ -0.18
DNMT3B-201ENST00000201963 YTHDC2Q9H6S0 1430 aaKnown RBP13.91□□□□□ -0.18
DNMT3B-201ENST00000201963 TPM4P67936 248 aa13.9□□□□□ -0.18
DNMT3B-201ENST00000201963 GNL2Q13823 731 aaKnown RBP13.9□□□□□ -0.18
DNMT3B-201ENST00000201963 CCAR2Q8N163 923 aaKnown RBP13.9□□□□□ -0.18
DNMT3B-201ENST00000201963 EFCAB6Q5THR3 1501 aa13.9□□□□□ -0.18
DNMT3B-201ENST00000201963 CBX1P83916 185 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms