RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 OVOS2Q6IE36 1432 aa23.17■■□□□ 1.3
SLC22A4-201ENST00000200652 TRIM27P14373 513 aa23.17■■□□□ 1.3
SLC22A4-201ENST00000200652 DIP2AQ14689 1571 aa23.16■■□□□ 1.3
SLC22A4-201ENST00000200652 DLG5Q8TDM6 1919 aa23.16■■□□□ 1.3
SLC22A4-201ENST00000200652 ATF7IPQ6VMQ6 1270 aa23.15■■□□□ 1.3
SLC22A4-201ENST00000200652 NOB1Q9ULX3 412 aaKnown RBP23.15■■□□□ 1.3
SLC22A4-201ENST00000200652 THUMPD2Q9BTF0 503 aaKnown RBP23.14■■□□□ 1.3
SLC22A4-201ENST00000200652 LAS1LQ9Y4W2 734 aaKnown RBP23.14■■□□□ 1.3
SLC22A4-201ENST00000200652 NALCNQ8IZF0 1738 aa23.14■■□□□ 1.3
SLC22A4-201ENST00000200652 TRHP20396 242 aaPredicted RBP23.14■■□□□ 1.29
SLC22A4-201ENST00000200652 CALD1Q05682 793 aaKnown RBP23.14■■□□□ 1.29
SLC22A4-201ENST00000200652 SSH2Q76I76 1423 aa23.13■■□□□ 1.29
SLC22A4-201ENST00000200652 ALDH1L2Q3SY69 923 aa23.13■■□□□ 1.29
SLC22A4-201ENST00000200652 RWDD1Q9H446 243 aaPredicted RBP23.12■■□□□ 1.29
SLC22A4-201ENST00000200652 RGPD8O14715 1765 aaPredicted RBP23.11■■□□□ 1.29
SLC22A4-201ENST00000200652 EIF4A2Q14240 407 aaKnown RBP23.11■■□□□ 1.29
SLC22A4-201ENST00000200652 IFT57Q9NWB7 429 aa23.11■■□□□ 1.29
SLC22A4-201ENST00000200652 KIF16BQ96L93 1317 aa23.11■■□□□ 1.29
SLC22A4-201ENST00000200652 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
SLC22A4-201ENST00000200652 ZNF853P0CG23 659 aa23.1■■□□□ 1.29
SLC22A4-201ENST00000200652 GNAI1P63096 354 aa23.1■■□□□ 1.29
SLC22A4-201ENST00000200652 USP31Q70CQ4 1352 aa23.1■■□□□ 1.29
SLC22A4-201ENST00000200652 ZNF428Q96B54 188 aa23.1■■□□□ 1.29
SLC22A4-201ENST00000200652 PEAK1Q9H792 1746 aa23.1■■□□□ 1.29
SLC22A4-201ENST00000200652 LMOD3Q0VAK6 560 aa23.09■■□□□ 1.29
SLC22A4-201ENST00000200652 DDX19BQ9UMR2 479 aa23.09■■□□□ 1.29
SLC22A4-201ENST00000200652 IPO8O15397 1037 aaKnown RBP23.09■■□□□ 1.29
SLC22A4-201ENST00000200652 VIRMAQ69YN4 1812 aaKnown RBP23.09■■□□□ 1.29
SLC22A4-201ENST00000200652 BRPF1P55201 1214 aaPredicted RBP23.08■■□□□ 1.29
SLC22A4-201ENST00000200652 ITPRIPQ8IWB1 547 aa23.08■■□□□ 1.29
SLC22A4-201ENST00000200652 TTC21AQ8NDW8 1320 aa23.08■■□□□ 1.28
SLC22A4-201ENST00000200652 VAMP4O75379 141 aa23.08■■□□□ 1.28
SLC22A4-201ENST00000200652 TMEM57Q8N5G2 664 aa23.07■■□□□ 1.28
SLC22A4-201ENST00000200652 MBIPQ9NS73 344 aa23.07■■□□□ 1.28
SLC22A4-201ENST00000200652 AEBP1Q8IUX7 1158 aa23.06■■□□□ 1.28
SLC22A4-201ENST00000200652 PDZRN3Q9UPQ7 1066 aa23.06■■□□□ 1.28
SLC22A4-201ENST00000200652 CEP170BQ9Y4F5 1589 aaPredicted RBP23.06■■□□□ 1.28
SLC22A4-201ENST00000200652 SULT6B1Q6IMI4 303 aa23.06■■□□□ 1.28
SLC22A4-201ENST00000200652 DDRGK1Q96HY6 314 aa23.06■■□□□ 1.28
SLC22A4-201ENST00000200652 CFAP44Q96MT7 982 aa23.05■■□□□ 1.28
SLC22A4-201ENST00000200652 RIMS1Q86UR5 1692 aaKnown RBP23.05■■□□□ 1.28
SLC22A4-201ENST00000200652 FAM83GA6ND36 823 aa23.05■■□□□ 1.28
SLC22A4-201ENST00000200652 HSP90AB2PQ58FF8 381 aa23.05■■□□□ 1.28
SLC22A4-201ENST00000200652 TSPYL6Q8N831 410 aa23.05■■□□□ 1.28
SLC22A4-201ENST00000200652 NGDNQ8NEJ9 315 aaKnown RBP23.04■■□□□ 1.28
SLC22A4-201ENST00000200652 RGPD1P0DJD0 1748 aa23.04■■□□□ 1.28
SLC22A4-201ENST00000200652 KCNA6P17658 529 aa23.04■■□□□ 1.28
SLC22A4-201ENST00000200652 MRPL50Q8N5N7 158 aaKnown RBP23.02■■□□□ 1.28
SLC22A4-201ENST00000200652 PIK3R4Q99570 1358 aa23.02■■□□□ 1.28
SLC22A4-201ENST00000200652 SOX12O15370 315 aa23.02■■□□□ 1.28
SLC22A4-201ENST00000200652 DCTN1Q14203 1278 aa23.02■■□□□ 1.28
SLC22A4-201ENST00000200652 HDAC1Q13547 482 aaPredicted RBP23.01■■□□□ 1.27
SLC22A4-201ENST00000200652 ZBTB40Q9NUA8 1239 aa23.01■■□□□ 1.27
SLC22A4-201ENST00000200652 ANKARQ7Z5J8 1434 aa23■■□□□ 1.27
SLC22A4-201ENST00000200652 MAP3K19Q56UN5 1328 aa23■■□□□ 1.27
SLC22A4-201ENST00000200652 FMN2Q9NZ56 1722 aa23■■□□□ 1.27
SLC22A4-201ENST00000200652 ELL2O00472 640 aaPredicted RBP23■■□□□ 1.27
SLC22A4-201ENST00000200652 PIK3C2AO00443 1686 aa22.99■■□□□ 1.27
SLC22A4-201ENST00000200652 TWISTNBQ3B726 338 aaPredicted RBP22.99■■□□□ 1.27
SLC22A4-201ENST00000200652 C8orf58Q8NAV2 365 aa22.99■■□□□ 1.27
SLC22A4-201ENST00000200652 ARHGAP45Q92619 1136 aa22.99■■□□□ 1.27
SLC22A4-201ENST00000200652 NBR1Q14596 966 aa22.97■■□□□ 1.27
SLC22A4-201ENST00000200652 SBNO1A3KN83 1393 aa22.97■■□□□ 1.27
SLC22A4-201ENST00000200652 FLT4P35916 1363 aa22.95■■□□□ 1.27
SLC22A4-201ENST00000200652 ARHGEF10O15013 1369 aa22.95■■□□□ 1.26
SLC22A4-201ENST00000200652 CHD2O14647 1828 aaKnown RBP22.94■■□□□ 1.26
SLC22A4-201ENST00000200652 USP19O94966 1318 aa22.94■■□□□ 1.26
SLC22A4-201ENST00000200652 SEC24BO95487 1268 aa22.93■■□□□ 1.26
SLC22A4-201ENST00000200652 SMC5Q8IY18 1101 aa22.93■■□□□ 1.26
SLC22A4-201ENST00000200652 ANKLE2Q86XL3 938 aa22.93■■□□□ 1.26
SLC22A4-201ENST00000200652 ZNF142P52746 1687 aaPredicted RBP22.92■■□□□ 1.26
SLC22A4-201ENST00000200652 ZBTB7BO15156 539 aaPredicted RBP22.92■■□□□ 1.26
SLC22A4-201ENST00000200652 AMPHP49418 695 aa22.92■■□□□ 1.26
SLC22A4-201ENST00000200652 NLRP6P59044 892 aa22.92■■□□□ 1.26
SLC22A4-201ENST00000200652 MCM10Q7L590 875 aa22.92■■□□□ 1.26
SLC22A4-201ENST00000200652 MARF1Q9Y4F3 1742 aaKnown RBP22.91■■□□□ 1.26
SLC22A4-201ENST00000200652 CHL1O00533 1208 aa22.91■■□□□ 1.26
SLC22A4-201ENST00000200652 ABCC4O15439 1325 aa22.91■■□□□ 1.26
SLC22A4-201ENST00000200652 USP54Q70EL1 1684 aa22.89■■□□□ 1.26
SLC22A4-201ENST00000200652 KDRP35968 1356 aa22.89■■□□□ 1.26
SLC22A4-201ENST00000200652 SLC4A3P48751 1232 aa22.89■■□□□ 1.25
SLC22A4-201ENST00000200652 CHMP4BQ9H444 224 aaKnown RBP22.89■■□□□ 1.25
SLC22A4-201ENST00000200652 EYA1Q99502 592 aa22.88■■□□□ 1.25
SLC22A4-201ENST00000200652 IGSF1Q8N6C5 1336 aa22.88■■□□□ 1.25
SLC22A4-201ENST00000200652 CRB1P82279 1406 aa22.87■■□□□ 1.25
SLC22A4-201ENST00000200652 MTHFSDQ2M296 383 aaKnown RBP22.87■■□□□ 1.25
SLC22A4-201ENST00000200652 NUTM2GQ5VZR2 741 aa22.87■■□□□ 1.25
SLC22A4-201ENST00000200652 API5Q9BZZ5 524 aaKnown RBP22.87■■□□□ 1.25
SLC22A4-201ENST00000200652 ADAMTSL3P82987 1691 aa22.87■■□□□ 1.25
SLC22A4-201ENST00000200652 KRT24Q2M2I5 525 aa22.86■■□□□ 1.25
SLC22A4-201ENST00000200652 KIAA0232Q92628 1395 aa22.85■■□□□ 1.25
SLC22A4-201ENST00000200652 FOXO3O43524 673 aa22.85■■□□□ 1.25
SLC22A4-201ENST00000200652 ABTB2Q8N961 1025 aa22.85■■□□□ 1.25
SLC22A4-201ENST00000200652 DAXXQ9UER7 740 aaPredicted RBP22.85■■□□□ 1.25
SLC22A4-201ENST00000200652 KIF24Q5T7B8 1368 aa22.84■■□□□ 1.25
SLC22A4-201ENST00000200652 HOXC9P31274 260 aa22.84■■□□□ 1.25
SLC22A4-201ENST00000200652 HAP1P54257 671 aaPredicted RBP22.84■■□□□ 1.25
SLC22A4-201ENST00000200652 PHF8Q9UPP1 1060 aa22.84■■□□□ 1.25
SLC22A4-201ENST00000200652 SETD1BQ9UPS6 1966 aaKnown RBP22.83■■□□□ 1.25
SLC22A4-201ENST00000200652 NUCB1Q02818 461 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms