RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 ESCO1Q5FWF5 840 aa24.13■■□□□ 1.45
CTSA-201ENST00000191018 RARSP54136 660 aaKnown RBP24.13■■□□□ 1.45
CTSA-201ENST00000191018 ABTB2Q8N961 1025 aa24.13■■□□□ 1.45
CTSA-201ENST00000191018 SOX12O15370 315 aa24.12■■□□□ 1.45
CTSA-201ENST00000191018 CT47B1P0C2W7 299 aaPredicted RBP24.11■■□□□ 1.45
CTSA-201ENST00000191018 KIF1AQ12756 1690 aa24.11■■□□□ 1.45
CTSA-201ENST00000191018 NCOA3Q9Y6Q9 1424 aa24.1■■□□□ 1.45
CTSA-201ENST00000191018 KDM4FA0A1W2PPD8 638 aa24.1■■□□□ 1.45
CTSA-201ENST00000191018 TSR2Q969E8 191 aaKnown RBP24.1■■□□□ 1.45
CTSA-201ENST00000191018 ARHGEF10O15013 1369 aa24.09■■□□□ 1.45
CTSA-201ENST00000191018 PAK3O75914 559 aaPredicted RBP24.09■■□□□ 1.45
CTSA-201ENST00000191018 C19orf44Q9H6X5 657 aa24.09■■□□□ 1.45
CTSA-201ENST00000191018 SULT6B1Q6IMI4 303 aa24.09■■□□□ 1.45
CTSA-201ENST00000191018 AEBP1Q8IUX7 1158 aa24.08■■□□□ 1.45
CTSA-201ENST00000191018 ORAI2Q96SN7 254 aa24.08■■□□□ 1.45
CTSA-201ENST00000191018 C1orf167Q5SNV9 1468 aa24.08■■□□□ 1.44
CTSA-201ENST00000191018 LMTK3Q96Q04 1460 aa24.08■■□□□ 1.44
CTSA-201ENST00000191018 LTN1O94822 1766 aa24.08■■□□□ 1.44
CTSA-201ENST00000191018 TRPM3Q9HCF6 1732 aaPredicted RBP24.08■■□□□ 1.44
CTSA-201ENST00000191018 HSPA2P54652 639 aa24.07■■□□□ 1.44
CTSA-201ENST00000191018 PSME1Q06323 249 aa24.07■■□□□ 1.44
CTSA-201ENST00000191018 NUTM2GQ5VZR2 741 aa24.07■■□□□ 1.44
CTSA-201ENST00000191018 NFAT5O94916 1531 aa24.07■■□□□ 1.44
CTSA-201ENST00000191018 PDE3AQ14432 1141 aa24.07■■□□□ 1.44
CTSA-201ENST00000191018 DCCP43146 1447 aa24.06■■□□□ 1.44
CTSA-201ENST00000191018 AMPHP49418 695 aa24.06■■□□□ 1.44
CTSA-201ENST00000191018 STRCQ7RTU9 1775 aa24.06■■□□□ 1.44
CTSA-201ENST00000191018 KDRP35968 1356 aa24.06■■□□□ 1.44
CTSA-201ENST00000191018 EXOSC9Q06265 439 aaKnown RBP24.05■■□□□ 1.44
CTSA-201ENST00000191018 TMEM94Q12767 1356 aa24.05■■□□□ 1.44
CTSA-201ENST00000191018 CALD1Q05682 793 aaKnown RBP24.04■■□□□ 1.44
CTSA-201ENST00000191018 LMOD3Q0VAK6 560 aa24.04■■□□□ 1.44
CTSA-201ENST00000191018 PHRF1Q9P1Y6 1649 aaKnown RBP24.04■■□□□ 1.44
CTSA-201ENST00000191018 RTL1A6NKG5 1358 aa24.04■■□□□ 1.44
CTSA-201ENST00000191018 IGSF1Q8N6C5 1336 aa24.03■■□□□ 1.44
CTSA-201ENST00000191018 HOXC9P31274 260 aa24.03■■□□□ 1.44
CTSA-201ENST00000191018 MST1RQ04912 1400 aa24.02■■□□□ 1.44
CTSA-201ENST00000191018 FOXO3O43524 673 aa24.01■■□□□ 1.43
CTSA-201ENST00000191018 ZNF853P0CG23 659 aa24.01■■□□□ 1.43
CTSA-201ENST00000191018 IFT57Q9NWB7 429 aa24■■□□□ 1.43
CTSA-201ENST00000191018 SLIT3O75094 1523 aa24■■□□□ 1.43
CTSA-201ENST00000191018 EYA1Q99502 592 aa24■■□□□ 1.43
CTSA-201ENST00000191018 THUMPD2Q9BTF0 503 aaKnown RBP24■■□□□ 1.43
CTSA-201ENST00000191018 XIRP1Q702N8 1843 aaKnown RBP24■■□□□ 1.43
CTSA-201ENST00000191018 GNAI1P63096 354 aa23.98■■□□□ 1.43
CTSA-201ENST00000191018 CANXP27824 592 aaKnown RBP23.98■■□□□ 1.43
CTSA-201ENST00000191018 KCNH5Q8NCM2 988 aa23.98■■□□□ 1.43
CTSA-201ENST00000191018 ALS2Q96Q42 1657 aa23.97■■□□□ 1.43
CTSA-201ENST00000191018 FRAT1Q92837 279 aaPredicted RBP23.97■■□□□ 1.43
CTSA-201ENST00000191018 BCL2L13Q9BXK5 485 aa23.97■■□□□ 1.43
CTSA-201ENST00000191018 FAM83GA6ND36 823 aa23.96■■□□□ 1.43
CTSA-201ENST00000191018 ATF3P18847 181 aa23.96■■□□□ 1.43
CTSA-201ENST00000191018 CFAP44Q96MT7 982 aa23.96■■□□□ 1.43
CTSA-201ENST00000191018 IP6K1Q92551 441 aa23.95■■□□□ 1.42
CTSA-201ENST00000191018 PANK1Q8TE04 598 aa23.94■■□□□ 1.42
CTSA-201ENST00000191018 KDM2BQ8NHM5 1336 aa23.94■■□□□ 1.42
CTSA-201ENST00000191018 XPCQ01831 940 aaPredicted RBP23.94■■□□□ 1.42
CTSA-201ENST00000191018 KRT28Q7Z3Y7 464 aa23.94■■□□□ 1.42
CTSA-201ENST00000191018 SSH1Q8WYL5 1049 aa23.94■■□□□ 1.42
CTSA-201ENST00000191018 ZNF428Q96B54 188 aa23.94■■□□□ 1.42
CTSA-201ENST00000191018 USP19O94966 1318 aa23.94■■□□□ 1.42
CTSA-201ENST00000191018 MBIPQ9NS73 344 aa23.93■■□□□ 1.42
CTSA-201ENST00000191018 LAS1LQ9Y4W2 734 aaKnown RBP23.93■■□□□ 1.42
CTSA-201ENST00000191018 DCTN1Q14203 1278 aa23.92■■□□□ 1.42
CTSA-201ENST00000191018 ALDH1L2Q3SY69 923 aa23.92■■□□□ 1.42
CTSA-201ENST00000191018 CADPS2Q86UW7 1296 aa23.92■■□□□ 1.42
CTSA-201ENST00000191018 SMC4Q9NTJ3 1288 aa23.92■■□□□ 1.42
CTSA-201ENST00000191018 ZKSCAN2Q63HK3 967 aa23.91■■□□□ 1.42
CTSA-201ENST00000191018 COG6Q9Y2V7 657 aa23.91■■□□□ 1.42
CTSA-201ENST00000191018 RLBP1P12271 317 aa23.9■■□□□ 1.42
CTSA-201ENST00000191018 TNNQ9UQP3 1299 aa23.9■■□□□ 1.42
CTSA-201ENST00000191018 GCP02774 474 aa23.9■■□□□ 1.42
CTSA-201ENST00000191018 MTHFSDQ2M296 383 aaKnown RBP23.9■■□□□ 1.42
CTSA-201ENST00000191018 RBM19Q9Y4C8 960 aaKnown RBP23.9■■□□□ 1.42
CTSA-201ENST00000191018 MSH6P52701 1360 aa23.89■■□□□ 1.42
CTSA-201ENST00000191018 BRPF1P55201 1214 aaPredicted RBP23.89■■□□□ 1.41
CTSA-201ENST00000191018 AAMPQ13685 434 aa23.89■■□□□ 1.41
CTSA-201ENST00000191018 VAMP4O75379 141 aa23.88■■□□□ 1.41
CTSA-201ENST00000191018 CENPQQ7L2Z9 268 aaPredicted RBP23.87■■□□□ 1.41
CTSA-201ENST00000191018 ARHGEF25Q86VW2 580 aa23.87■■□□□ 1.41
CTSA-201ENST00000191018 GAS2L2Q8NHY3 880 aa23.87■■□□□ 1.41
CTSA-201ENST00000191018 CRB1P82279 1406 aa23.87■■□□□ 1.41
CTSA-201ENST00000191018 MS4A1P11836 297 aa23.87■■□□□ 1.41
CTSA-201ENST00000191018 CLUAP1Q96AJ1 413 aa23.86■■□□□ 1.41
CTSA-201ENST00000191018 RGPD2P0DJD1 1756 aa23.86■■□□□ 1.41
CTSA-201ENST00000191018 LRRC37A3O60309 1634 aa23.86■■□□□ 1.41
CTSA-201ENST00000191018 MED1Q15648 1581 aaPredicted RBP23.86■■□□□ 1.41
CTSA-201ENST00000191018 KIF16BQ96L93 1317 aa23.86■■□□□ 1.41
CTSA-201ENST00000191018 MCM10Q7L590 875 aa23.85■■□□□ 1.41
CTSA-201ENST00000191018 TSPYL6Q8N831 410 aa23.85■■□□□ 1.41
CTSA-201ENST00000191018 CHL1O00533 1208 aa23.85■■□□□ 1.41
CTSA-201ENST00000191018 LTV1Q96GA3 475 aaPredicted RBP23.85■■□□□ 1.41
CTSA-201ENST00000191018 TRIM27P14373 513 aa23.84■■□□□ 1.41
CTSA-201ENST00000191018 ATF7IPQ6VMQ6 1270 aa23.84■■□□□ 1.41
CTSA-201ENST00000191018 DZIP1LQ8IYY4 767 aaKnown RBP23.84■■□□□ 1.41
CTSA-201ENST00000191018 NOB1Q9ULX3 412 aaKnown RBP23.83■■□□□ 1.41
CTSA-201ENST00000191018 HTATSF1O43719 755 aaKnown RBP23.83■■□□□ 1.4
CTSA-201ENST00000191018 MVPQ14764 893 aaKnown RBP23.83■■□□□ 1.4
CTSA-201ENST00000191018 NCAPD2Q15021 1401 aa23.83■■□□□ 1.4
CTSA-201ENST00000191018 CAMTA1Q9Y6Y1 1673 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms