RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 NFKBIBQ15653 356 aa15□□□□□ -0.01
CHPF2-201ENST00000035307 IQGAP3Q86VI3 1631 aa15□□□□□ -0.01
CHPF2-201ENST00000035307 FRAT2O75474 233 aaPredicted RBP15□□□□□ -0.01
CHPF2-201ENST00000035307 TTC5Q8N0Z6 440 aa15□□□□□ -0.01
CHPF2-201ENST00000035307 TSPYL6Q8N831 410 aa15□□□□□ -0.01
CHPF2-201ENST00000035307 PTMAP06454 111 aaKnown RBP14.99□□□□□ -0.01
CHPF2-201ENST00000035307 ABCA6Q8N139 1617 aa14.99□□□□□ -0.01
CHPF2-201ENST00000035307 PIK3C2GO75747 1445 aa14.99□□□□□ -0.01
CHPF2-201ENST00000035307 RILPL2Q969X0 211 aa14.99□□□□□ -0.01
CHPF2-201ENST00000035307 RARSP54136 660 aaKnown RBP14.98□□□□□ -0.01
CHPF2-201ENST00000035307 EIF2AK4Q9P2K8 1649 aaKnown RBP14.98□□□□□ -0.01
CHPF2-201ENST00000035307 EYA1Q99502 592 aa14.98□□□□□ -0.01
CHPF2-201ENST00000035307 RBM42Q9BTD8 480 aaKnown RBP14.98□□□□□ -0.01
CHPF2-201ENST00000035307 DDX19BQ9UMR2 479 aa14.98□□□□□ -0.01
CHPF2-201ENST00000035307 FGD1P98174 961 aa14.97□□□□□ -0.01
CHPF2-201ENST00000035307 HDGFL1Q5TGJ6 251 aa14.97□□□□□ -0.01
CHPF2-201ENST00000035307 TMEM57Q8N5G2 664 aa14.97□□□□□ -0.01
CHPF2-201ENST00000035307 SETD1BQ9UPS6 1966 aaKnown RBP14.97□□□□□ -0.01
CHPF2-201ENST00000035307 RNF17Q9BXT8 1623 aaKnown RBP14.97□□□□□ -0.01
CHPF2-201ENST00000035307 DIP2CQ9Y2E4 1556 aa14.97□□□□□ -0.01
CHPF2-201ENST00000035307 GAS2L2Q8NHY3 880 aa14.97□□□□□ -0.01
CHPF2-201ENST00000035307 SLC39A6Q13433 755 aa14.96□□□□□ -0.01
CHPF2-201ENST00000035307 GCP02774 474 aa14.96□□□□□ -0.01
CHPF2-201ENST00000035307 C19orf44Q9H6X5 657 aa14.96□□□□□ -0.01
CHPF2-201ENST00000035307 MBIPQ9NS73 344 aa14.96□□□□□ -0.01
CHPF2-201ENST00000035307 CFAP74Q9C0B2 1584 aa14.96□□□□□ -0.01
CHPF2-201ENST00000035307 TET3O43151 1660 aa14.96□□□□□ -0.02
CHPF2-201ENST00000035307 PPRC1Q5VV67 1664 aaKnown RBP14.96□□□□□ -0.02
CHPF2-201ENST00000035307 ANKRD24Q8TF21 1146 aa14.96□□□□□ -0.02
CHPF2-201ENST00000035307 GSE1Q14687 1217 aa14.95□□□□□ -0.02
CHPF2-201ENST00000035307 PLEKHO1Q53GL0 409 aaPredicted RBP14.95□□□□□ -0.02
CHPF2-201ENST00000035307 WDR63Q8IWG1 891 aa14.95□□□□□ -0.02
CHPF2-201ENST00000035307 ARAP3Q8WWN8 1544 aa14.95□□□□□ -0.02
CHPF2-201ENST00000035307 UNC13BO14795 1591 aa14.95□□□□□ -0.02
CHPF2-201ENST00000035307 C8orf58Q8NAV2 365 aa14.95□□□□□ -0.02
CHPF2-201ENST00000035307 JARID2Q92833 1246 aaPredicted RBP14.95□□□□□ -0.02
CHPF2-201ENST00000035307 TATP17735 454 aaPredicted RBP14.95□□□□□ -0.02
CHPF2-201ENST00000035307 MTHFSDQ2M296 383 aaKnown RBP14.95□□□□□ -0.02
CHPF2-201ENST00000035307 KIF1BO60333 1816 aa14.94□□□□□ -0.02
CHPF2-201ENST00000035307 MEX3CQ5U5Q3 659 aaKnown RBP14.94□□□□□ -0.02
CHPF2-201ENST00000035307 CADPS2Q86UW7 1296 aa14.94□□□□□ -0.02
CHPF2-201ENST00000035307 C9orf78Q9NZ63 289 aaPredicted RBP14.94□□□□□ -0.02
CHPF2-201ENST00000035307 ABCC11Q96J66 1382 aa14.94□□□□□ -0.02
CHPF2-201ENST00000035307 A2ML1A8K2U0 1454 aa14.94□□□□□ -0.02
CHPF2-201ENST00000035307 RLBP1P12271 317 aa14.94□□□□□ -0.02
CHPF2-201ENST00000035307 IL27Q8NEV9 243 aa14.94□□□□□ -0.02
CHPF2-201ENST00000035307 CCDC85AQ96PX6 553 aaPredicted RBP14.93□□□□□ -0.02
CHPF2-201ENST00000035307 ANO8Q9HCE9 1232 aaPredicted RBP14.93□□□□□ -0.02
CHPF2-201ENST00000035307 ATF7IPQ6VMQ6 1270 aa14.93□□□□□ -0.02
CHPF2-201ENST00000035307 ARID3AQ99856 593 aa14.93□□□□□ -0.02
CHPF2-201ENST00000035307 BTBD11A6QL63 1104 aa14.92□□□□□ -0.02
CHPF2-201ENST00000035307 GNAT3A8MTJ3 354 aa14.92□□□□□ -0.02
CHPF2-201ENST00000035307 INO80Q9ULG1 1556 aaPredicted RBP14.92□□□□□ -0.02
CHPF2-201ENST00000035307 C22orf23Q9BZE7 217 aa14.92□□□□□ -0.02
CHPF2-201ENST00000035307 BRPF3Q9ULD4 1205 aa14.92□□□□□ -0.02
CHPF2-201ENST00000035307 ZNF335Q9H4Z2 1342 aaPredicted RBP14.92□□□□□ -0.02
CHPF2-201ENST00000035307 DIP2BQ9P265 1576 aa14.91□□□□□ -0.02
CHPF2-201ENST00000035307 IGHDP01880 384 aa14.91□□□□□ -0.02
CHPF2-201ENST00000035307 TRIM27P14373 513 aa14.91□□□□□ -0.02
CHPF2-201ENST00000035307 SPHKAPQ2M3C7 1700 aa14.91□□□□□ -0.02
CHPF2-201ENST00000035307 DNTTIP2Q5QJE6 756 aaKnown RBP14.91□□□□□ -0.02
CHPF2-201ENST00000035307 RIC3Q7Z5B4 369 aa14.9□□□□□ -0.02
CHPF2-201ENST00000035307 KCNH5Q8NCM2 988 aa14.9□□□□□ -0.02
CHPF2-201ENST00000035307 RSPH6AQ9H0K4 717 aa14.9□□□□□ -0.02
CHPF2-201ENST00000035307 KIF16BQ96L93 1317 aa14.9□□□□□ -0.02
CHPF2-201ENST00000035307 CABP4P57796 275 aa14.89□□□□□ -0.03
CHPF2-201ENST00000035307 API5Q9BZZ5 524 aaKnown RBP14.89□□□□□ -0.03
CHPF2-201ENST00000035307 HOXC9P31274 260 aa14.89□□□□□ -0.03
CHPF2-201ENST00000035307 IL13P35225 146 aa14.89□□□□□ -0.03
CHPF2-201ENST00000035307 PDE3AQ14432 1141 aa14.89□□□□□ -0.03
CHPF2-201ENST00000035307 HMMRO75330 724 aa14.88□□□□□ -0.03
CHPF2-201ENST00000035307 TRIM35Q9UPQ4 493 aa14.88□□□□□ -0.03
CHPF2-201ENST00000035307 UBAP1LF5GYI3 381 aa14.88□□□□□ -0.03
CHPF2-201ENST00000035307 NBPF6Q5VWK0 638 aa14.88□□□□□ -0.03
CHPF2-201ENST00000035307 KIAA1211Q6ZU35 1233 aa14.88□□□□□ -0.03
CHPF2-201ENST00000035307 NBPF4Q96M43 638 aa14.88□□□□□ -0.03
CHPF2-201ENST00000035307 MSH6P52701 1360 aa14.88□□□□□ -0.03
CHPF2-201ENST00000035307 GOLGA6L3A6NEY3 463 aa14.88□□□□□ -0.03
CHPF2-201ENST00000035307 GBP4Q96PP9 640 aa14.88□□□□□ -0.03
CHPF2-201ENST00000035307 CLTCQ00610 1675 aaKnown RBP14.87□□□□□ -0.03
CHPF2-201ENST00000035307 LGR6Q9HBX8 967 aa14.87□□□□□ -0.03
CHPF2-201ENST00000035307 POLR3AO14802 1390 aaPredicted RBP14.87□□□□□ -0.03
CHPF2-201ENST00000035307 TMEM94Q12767 1356 aa14.87□□□□□ -0.03
CHPF2-201ENST00000035307 SIL1Q9H173 461 aa14.87□□□□□ -0.03
CHPF2-201ENST00000035307 FRMPD1Q5SYB0 1578 aa14.87□□□□□ -0.03
CHPF2-201ENST00000035307 MCCP23508 829 aa14.86□□□□□ -0.03
CHPF2-201ENST00000035307 MVPQ14764 893 aaKnown RBP14.86□□□□□ -0.03
CHPF2-201ENST00000035307 TRPM1Q7Z4N2 1603 aa14.86□□□□□ -0.03
CHPF2-201ENST00000035307 SMARCA5O60264 1052 aaPredicted RBP14.85□□□□□ -0.03
CHPF2-201ENST00000035307 GTF2E1P29083 439 aaPredicted RBP14.85□□□□□ -0.03
CHPF2-201ENST00000035307 TAF7LQ5H9L4 462 aa14.85□□□□□ -0.03
CHPF2-201ENST00000035307 EXOC6BQ9Y2D4 811 aa14.85□□□□□ -0.03
CHPF2-201ENST00000035307 MAP3K4Q9Y6R4 1608 aa14.85□□□□□ -0.03
CHPF2-201ENST00000035307 CCDC30Q5VVM6 783 aa14.85□□□□□ -0.03
CHPF2-201ENST00000035307 MYOM2P54296 1465 aa14.85□□□□□ -0.03
CHPF2-201ENST00000035307 PCDHB15Q9Y5E8 787 aa14.84□□□□□ -0.03
CHPF2-201ENST00000035307 IL1RAPL2Q9NP60 686 aa14.84□□□□□ -0.03
CHPF2-201ENST00000035307 ANO2Q9NQ90 1003 aa14.84□□□□□ -0.03
CHPF2-201ENST00000035307 MADDQ8WXG6 1647 aa14.84□□□□□ -0.03
CHPF2-201ENST00000035307 MAP4K4O95819 1239 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms