RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 SLC4A10Q6U841 1118 aa7.16□□□□□ -1.26
VPS13D-201ENST00000011700 SYNJ2O15056 1496 aa7.15□□□□□ -1.26
VPS13D-201ENST00000011700 CCT4P50991 539 aaKnown RBP7.15□□□□□ -1.26
VPS13D-201ENST00000011700 CCDC148Q8NFR7 591 aa7.15□□□□□ -1.26
VPS13D-201ENST00000011700 SF3B2Q13435 895 aaKnown RBP7.15□□□□□ -1.26
VPS13D-201ENST00000011700 GAS2L2Q8NHY3 880 aa7.15□□□□□ -1.26
VPS13D-201ENST00000011700 ANO2Q9NQ90 1003 aa7.15□□□□□ -1.26
VPS13D-201ENST00000011700 CEP128Q6ZU80 1094 aa7.15□□□□□ -1.27
VPS13D-201ENST00000011700 LRRC45Q96CN5 670 aa7.15□□□□□ -1.27
VPS13D-201ENST00000011700 CCDC172P0C7W6 258 aa7.15□□□□□ -1.27
VPS13D-201ENST00000011700 CLUAP1Q96AJ1 413 aa7.15□□□□□ -1.27
VPS13D-201ENST00000011700 CASTP20810 708 aaKnown RBP7.15□□□□□ -1.27
VPS13D-201ENST00000011700 GSDMDP57764 484 aa7.15□□□□□ -1.27
VPS13D-201ENST00000011700 NCOA2Q15596 1464 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 CCDC30Q5VVM6 783 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 ZSCAN31Q96LW9 406 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-201ENST00000011700 HOXA7P31268 230 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-201ENST00000011700 ENOX2Q16206 610 aaKnown RBP7.14□□□□□ -1.27
VPS13D-201ENST00000011700 CEP57L1Q8IYX8 460 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 PRKRIP1Q9H875 184 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-201ENST00000011700 NOL7Q9UMY1 257 aaKnown RBP7.14□□□□□ -1.27
VPS13D-201ENST00000011700 CASKIN1Q8WXD9 1431 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 SPRYD3Q8NCJ5 442 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 STMN4Q9H169 189 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-201ENST00000011700 FAM114A2Q9NRY5 505 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 SNAPC4Q5SXM2 1469 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 MROH2BQ7Z745 1585 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 CCDC57Q2TAC2 916 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 CRACR2AQ9BSW2 395 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 NESP48681 1621 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 SPECC1LQ69YQ0 1117 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 HIRIP3Q9BW71 556 aaPredicted RBP7.14□□□□□ -1.27
VPS13D-201ENST00000011700 FAM135AQ9P2D6 1515 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 TAOK2Q9UL54 1235 aa7.14□□□□□ -1.27
VPS13D-201ENST00000011700 GOLIM4O00461 696 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 DIAPH1O60610 1272 aaKnown RBP7.13□□□□□ -1.27
VPS13D-201ENST00000011700 IVLP07476 585 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 CETN1Q12798 172 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 FGD6Q6ZV73 1430 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 TTLL5Q6EMB2 1281 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 VSIG10Q8N0Z9 540 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 ADGBQ8N7X0 1667 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 IFI16Q16666 785 aaKnown RBP7.13□□□□□ -1.27
VPS13D-201ENST00000011700 C6orf163Q5TEZ5 329 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 CCDC150Q8NCX0 1101 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 TRAF1Q13077 416 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 KIF18AQ8NI77 898 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 RBM33Q96EV2 1170 aaKnown RBP7.13□□□□□ -1.27
VPS13D-201ENST00000011700 SCAND2PQ9GZW5 306 aaPredicted RBP7.13□□□□□ -1.27
VPS13D-201ENST00000011700 CADPSQ9ULU8 1353 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 GAPVD1Q14C86 1478 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 ARHGAP5Q13017 1502 aa7.13□□□□□ -1.27
VPS13D-201ENST00000011700 SMC1AQ14683 1233 aaKnown RBP7.13□□□□□ -1.27
VPS13D-201ENST00000011700 TIAM1Q13009 1591 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 USP37Q86T82 979 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 SEPT11Q9NVA2 429 aaKnown RBP7.12□□□□□ -1.27
VPS13D-201ENST00000011700 HMGXB3Q12766 1538 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 NCAPD3P42695 1498 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 PRPHP41219 470 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 PPP6R1Q9UPN7 881 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 LRRC9Q6ZRR7 1453 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 KIF4AO95239 1232 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 EPRSP07814 1512 aaKnown RBP7.12□□□□□ -1.27
VPS13D-201ENST00000011700 KANK3Q6NY19 840 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 ANKS4BQ8N8V4 417 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 GPRASP1Q5JY77 1395 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 TNIP1Q15025 636 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 MYH11P35749 1972 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 UBTFL1P0CB47 393 aaPredicted RBP7.12□□□□□ -1.27
VPS13D-201ENST00000011700 PAXBP1Q9Y5B6 917 aa7.12□□□□□ -1.27
VPS13D-201ENST00000011700 APBB1O00213 710 aa7.11□□□□□ -1.27
VPS13D-201ENST00000011700 LRRC27Q9C0I9 530 aa7.11□□□□□ -1.27
VPS13D-201ENST00000011700 TTC21AQ8NDW8 1320 aa7.11□□□□□ -1.27
VPS13D-201ENST00000011700 GRIPAP1Q4V328 841 aa7.11□□□□□ -1.27
VPS13D-201ENST00000011700 GIMAP7Q8NHV1 300 aa7.11□□□□□ -1.27
VPS13D-201ENST00000011700 NDC80O14777 642 aa7.11□□□□□ -1.27
VPS13D-201ENST00000011700 ZFYVE27Q5T4F4 411 aa7.11□□□□□ -1.27
VPS13D-201ENST00000011700 FILIP1Q7Z7B0 1213 aa7.11□□□□□ -1.27
VPS13D-201ENST00000011700 CGNQ9P2M7 1197 aaKnown RBP7.11□□□□□ -1.27
VPS13D-201ENST00000011700 TTC14Q96N46 770 aa7.11□□□□□ -1.27
VPS13D-201ENST00000011700 DDX46Q7L014 1031 aaKnown RBP7.11□□□□□ -1.27
VPS13D-201ENST00000011700 SIN3AQ96ST3 1273 aa7.11□□□□□ -1.27
VPS13D-201ENST00000011700 VPS37CA5D8V6 355 aaPredicted RBP7.11□□□□□ -1.27
VPS13D-201ENST00000011700 SH2B1Q9NRF2 756 aaPredicted RBP7.11□□□□□ -1.27
VPS13D-201ENST00000011700 CYP46A1Q9Y6A2 500 aa7.11□□□□□ -1.27
VPS13D-201ENST00000011700 PLEKHG5O94827 1062 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 RBM25P49756 843 aaKnown RBP7.1□□□□□ -1.27
VPS13D-201ENST00000011700 CLUL1Q15846 466 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 ABCC11Q96J66 1382 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 KIF6Q6ZMV9 814 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 WDR63Q8IWG1 891 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 TCHHQ07283 1943 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 SRRTQ9BXP5 876 aaKnown RBP7.1□□□□□ -1.27
VPS13D-201ENST00000011700 CCDC171Q6TFL3 1326 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 KIF5CO60282 957 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 STXBP4Q6ZWJ1 553 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 KIAA1328Q86T90 577 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 EVA1CP58658 441 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 FAM114A1Q8IWE2 563 aa7.1□□□□□ -1.27
VPS13D-201ENST00000011700 EPB41L2O43491 1005 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms