RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Olfml1Q8BSH2 233 aa11.37□□□□□ -0.59
Usp28-203ENSMUST00000213874 HnrnpuQ8VEK3 800 aaKnown RBP11.37□□□□□ -0.59
Usp28-203ENSMUST00000213874 Cfap65Q3V0B4 1847 aa11.37□□□□□ -0.59
Usp28-203ENSMUST00000213874 Abca5Q8K448 1642 aa11.37□□□□□ -0.59
Usp28-203ENSMUST00000213874 Mrvi1Q9WUX5 899 aaKnown RBP11.36□□□□□ -0.59
Usp28-203ENSMUST00000213874 Cyp46a1Q9WVK8 500 aa11.36□□□□□ -0.59
Usp28-203ENSMUST00000213874 Pof1bQ8K4L4 587 aa11.36□□□□□ -0.59
Usp28-203ENSMUST00000213874 MvpQ9EQK5 861 aa11.36□□□□□ -0.59
Usp28-203ENSMUST00000213874 NinlQ6ZQ12 1394 aa11.36□□□□□ -0.59
Usp28-203ENSMUST00000213874 Ppip5k1A2ARP1 1436 aa11.36□□□□□ -0.59
Usp28-203ENSMUST00000213874 Rassf8Q8CJ96 419 aa11.35□□□□□ -0.59
Usp28-203ENSMUST00000213874 Mlh3A0A1Y7VMP7 1443 aa11.35□□□□□ -0.59
Usp28-203ENSMUST00000213874 Trim27Q62158 513 aa11.35□□□□□ -0.59
Usp28-203ENSMUST00000213874 Filip1lQ6P6L0 1131 aa11.35□□□□□ -0.59
Usp28-203ENSMUST00000213874 Gcc2Q8CHG3 1679 aa11.35□□□□□ -0.59
Usp28-203ENSMUST00000213874 Lrrc9Q8CDN9 1456 aa11.35□□□□□ -0.59
Usp28-203ENSMUST00000213874 Erich4Q3UNU4 136 aa11.35□□□□□ -0.59
Usp28-203ENSMUST00000213874 Mkrn3Q60764 544 aa11.35□□□□□ -0.59
Usp28-203ENSMUST00000213874 Srgap3Q812A2 1099 aa11.35□□□□□ -0.59
Usp28-203ENSMUST00000213874 Aldh1l1Q8R0Y6 902 aa11.35□□□□□ -0.59
Usp28-203ENSMUST00000213874 Dot1lQ6XZL8 1540 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 PtprgQ05909 1442 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Edc4Q3UJB9 1406 aaKnown RBP11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Gm21190A0A0G2JGJ6 266 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Gnai1B2RSH2 354 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Bms1Q6PGF5 1284 aaKnown RBP11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Sv2bQ8BG39 683 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Samm50Q8BGH2 469 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Gnai3Q9DC51 354 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Fam83gQ5SWY7 812 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Fmnl2A2APV2 1086 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Vamp4O70480 141 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Gripap1Q8VD04 806 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 Arhgef11Q68FM7 1552 aa11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 IbtkQ6ZPR6 1352 aaKnown RBP11.34□□□□□ -0.59
Usp28-203ENSMUST00000213874 MyclP10166 368 aa11.33□□□□□ -0.6
Usp28-203ENSMUST00000213874 Kiaa0754Q69ZZ9 979 aa11.33□□□□□ -0.6
Usp28-203ENSMUST00000213874 Fkbp4P30416 458 aa11.33□□□□□ -0.6
Usp28-203ENSMUST00000213874 Kdm5cP41230 1554 aa11.32□□□□□ -0.6
Usp28-203ENSMUST00000213874 Sh3bp1P55194 680 aa11.32□□□□□ -0.6
Usp28-203ENSMUST00000213874 Zpr1Q62384 459 aa11.32□□□□□ -0.6
Usp28-203ENSMUST00000213874 Zkscan1Q8BGS3 561 aaKnown RBP11.32□□□□□ -0.6
Usp28-203ENSMUST00000213874 HnrnpmQ9D0E1 729 aaKnown RBP11.32□□□□□ -0.6
Usp28-203ENSMUST00000213874 Sh3bp5Q9Z131 463 aa11.32□□□□□ -0.6
Usp28-203ENSMUST00000213874 Chd1lQ9CXF7 900 aa11.31□□□□□ -0.6
Usp28-203ENSMUST00000213874 Setbp1Q9Z180 1582 aa11.31□□□□□ -0.6
Usp28-203ENSMUST00000213874 Exoc6bA6H5Z3 810 aa11.31□□□□□ -0.6
Usp28-203ENSMUST00000213874 Cfdp1O88271 295 aaKnown RBP11.31□□□□□ -0.6
Usp28-203ENSMUST00000213874 Atp2b3Q0VF55 1220 aa11.31□□□□□ -0.6
Usp28-203ENSMUST00000213874 Ercc6lQ8BHK9 1240 aa11.31□□□□□ -0.6
Usp28-203ENSMUST00000213874 AI481877A2ALV5 1481 aa11.31□□□□□ -0.6
Usp28-203ENSMUST00000213874 NexnQ7TPW1 607 aa11.31□□□□□ -0.6
Usp28-203ENSMUST00000213874 Fam13aQ8BGI4 693 aa11.31□□□□□ -0.6
Usp28-203ENSMUST00000213874 Tmx1Q8VBT0 278 aa11.31□□□□□ -0.6
Usp28-203ENSMUST00000213874 Atf7ipQ7TT18 1306 aa11.31□□□□□ -0.6
Usp28-203ENSMUST00000213874 Pdia3P27773 505 aaKnown RBP11.3□□□□□ -0.6
Usp28-203ENSMUST00000213874 Znf608Q56A10 1511 aa11.3□□□□□ -0.6
Usp28-203ENSMUST00000213874 Ankrd44B2RXR6 993 aa11.3□□□□□ -0.6
Usp28-203ENSMUST00000213874 4931400O07RikQ9D4M5 137 aa11.3□□□□□ -0.6
Usp28-203ENSMUST00000213874 Eif4g3Q80XI3 1579 aaKnown RBP11.3□□□□□ -0.6
Usp28-203ENSMUST00000213874 MccE9PWI3 1003 aa11.3□□□□□ -0.6
Usp28-203ENSMUST00000213874 MecomP14404 1042 aa11.3□□□□□ -0.6
Usp28-203ENSMUST00000213874 EvcP57680 1005 aa11.3□□□□□ -0.6
Usp28-203ENSMUST00000213874 Atp10dQ8K2X1 1416 aa11.3□□□□□ -0.6
Usp28-203ENSMUST00000213874 Abcc6Q9R1S7 1498 aa11.3□□□□□ -0.6
Usp28-203ENSMUST00000213874 Fgd6Q69ZL1 1399 aa11.3□□□□□ -0.6
Usp28-203ENSMUST00000213874 Ercc3P49135 783 aa11.29□□□□□ -0.6
Usp28-203ENSMUST00000213874 TmpoQ61033 693 aaKnown RBP11.29□□□□□ -0.6
Usp28-203ENSMUST00000213874 Sf3a1Q8K4Z5 791 aaKnown RBP11.29□□□□□ -0.6
Usp28-203ENSMUST00000213874 AatkQ80YE4 1365 aa11.29□□□□□ -0.6
Usp28-203ENSMUST00000213874 Wdr78E9PYY5 807 aa11.29□□□□□ -0.6
Usp28-203ENSMUST00000213874 MycnP03966 462 aaKnown RBP11.29□□□□□ -0.6
Usp28-203ENSMUST00000213874 Tmx3Q8BXZ1 456 aa11.29□□□□□ -0.6
Usp28-203ENSMUST00000213874 Kif4P33174 1231 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Prdm4Q80V63 803 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Znf771Q8BJ90 317 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Fez1Q8K0X8 392 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Iffo2Q8R2V2 512 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Rcan3Q9JKK0 239 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Gm9992B2RWK3 458 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Unc93aQ710D3 458 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Cetn4Q8K4K1 168 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Ppp1r42Q8R1Z4 357 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Nsd3Q6P2L6 1439 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Gm10093D3YYI8 482 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 Hdac1O09106 482 aaKnown RBP11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 St18Q80TY4 1045 aa11.28□□□□□ -0.6
Usp28-203ENSMUST00000213874 NcapgE9PWG6 1004 aa11.27□□□□□ -0.6
Usp28-203ENSMUST00000213874 Ptpdc1Q6NZK8 747 aa11.27□□□□□ -0.6
Usp28-203ENSMUST00000213874 Zmynd15Q8C0R7 736 aa11.27□□□□□ -0.6
Usp28-203ENSMUST00000213874 Fancd2Q80V62 1450 aa11.27□□□□□ -0.6
Usp28-203ENSMUST00000213874 Ankrd50F7BE84 1390 aa11.27□□□□□ -0.61
Usp28-203ENSMUST00000213874 Ddit3P35639 168 aa11.27□□□□□ -0.61
Usp28-203ENSMUST00000213874 Neurod6P48986 337 aa11.27□□□□□ -0.61
Usp28-203ENSMUST00000213874 Erc2Q6PH08 957 aa11.27□□□□□ -0.61
Usp28-203ENSMUST00000213874 1700010I14RikQ7TPG0 532 aa11.27□□□□□ -0.61
Usp28-203ENSMUST00000213874 CtcfQ61164 736 aaKnown RBP11.27□□□□□ -0.61
Usp28-203ENSMUST00000213874 Ccdc171E9Q1U1 1324 aa11.26□□□□□ -0.61
Usp28-203ENSMUST00000213874 Isy1Q69ZQ2 285 aaKnown RBP11.26□□□□□ -0.61
Usp28-203ENSMUST00000213874 Pdcl2Q78Y63 240 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms