RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Mcm10Q0VBD2 885 aa9.74□□□□□ -0.85
Usp40-204ENSMUST00000187758 TnikP83510 1323 aa9.74□□□□□ -0.85
Usp40-204ENSMUST00000187758 PaskQ8CEE6 1383 aa9.74□□□□□ -0.85
Usp40-204ENSMUST00000187758 Fam71e1A1L3C1 212 aa9.74□□□□□ -0.85
Usp40-204ENSMUST00000187758 Atxn3Q9CVD2 355 aa9.74□□□□□ -0.85
Usp40-204ENSMUST00000187758 Dnajc10Q9DC23 793 aa9.74□□□□□ -0.85
Usp40-204ENSMUST00000187758 Cabp2Q9JLK4 216 aa9.74□□□□□ -0.85
Usp40-204ENSMUST00000187758 Polr3glQ8R0C0 218 aa9.73□□□□□ -0.85
Usp40-204ENSMUST00000187758 DccP70211 1447 aa9.73□□□□□ -0.85
Usp40-204ENSMUST00000187758 Znf541Q0GGX2 1363 aa9.73□□□□□ -0.85
Usp40-204ENSMUST00000187758 Kif24Q6NWW5 1356 aa9.73□□□□□ -0.85
Usp40-204ENSMUST00000187758 Gm21698A0A087WQP8 267 aa9.73□□□□□ -0.85
Usp40-204ENSMUST00000187758 Gm21671G3UY31 267 aa9.73□□□□□ -0.85
Usp40-204ENSMUST00000187758 Ksr2Q3UVC0 959 aa9.73□□□□□ -0.85
Usp40-204ENSMUST00000187758 Q4VA45 678 aa9.73□□□□□ -0.85
Usp40-204ENSMUST00000187758 Eya1P97767 591 aa9.72□□□□□ -0.85
Usp40-204ENSMUST00000187758 Rwdd1Q9CQK7 243 aa9.72□□□□□ -0.85
Usp40-204ENSMUST00000187758 Rab11fip3Q8CHD8 1047 aa9.72□□□□□ -0.85
Usp40-204ENSMUST00000187758 Bcl11bQ99PV8 884 aa9.72□□□□□ -0.85
Usp40-204ENSMUST00000187758 NudcO35685 332 aaKnown RBP9.72□□□□□ -0.85
Usp40-204ENSMUST00000187758 NeflP08551 543 aa9.72□□□□□ -0.85
Usp40-204ENSMUST00000187758 HdgfP51859 237 aaKnown RBP9.72□□□□□ -0.85
Usp40-204ENSMUST00000187758 Spef2Q8C9J3 1734 aa9.72□□□□□ -0.85
Usp40-204ENSMUST00000187758 Gimap5Q8BWF2 308 aa9.71□□□□□ -0.85
Usp40-204ENSMUST00000187758 Ccar1Q8CH18 1146 aaKnown RBP9.71□□□□□ -0.85
Usp40-204ENSMUST00000187758 Trim26Q99PN3 545 aa9.71□□□□□ -0.85
Usp40-204ENSMUST00000187758 Parp14Q2EMV9 1817 aa9.71□□□□□ -0.85
Usp40-204ENSMUST00000187758 Uhrf1bp1B2KF50 1429 aa9.71□□□□□ -0.86
Usp40-204ENSMUST00000187758 Erbb3Q61526 1339 aa9.71□□□□□ -0.86
Usp40-204ENSMUST00000187758 TnrQ8BYI9 1358 aa9.71□□□□□ -0.86
Usp40-204ENSMUST00000187758 Nol11Q8BJW5 723 aaKnown RBP9.7□□□□□ -0.86
Usp40-204ENSMUST00000187758 Nfat5Q9WV30 1534 aa9.7□□□□□ -0.86
Usp40-204ENSMUST00000187758 Anp32aO35381 247 aa9.7□□□□□ -0.86
Usp40-204ENSMUST00000187758 Gsdma3Q5Y4Y6 464 aa9.7□□□□□ -0.86
Usp40-204ENSMUST00000187758 TmpoQ61033 693 aaKnown RBP9.7□□□□□ -0.86
Usp40-204ENSMUST00000187758 HypkQ9CR41 129 aa9.7□□□□□ -0.86
Usp40-204ENSMUST00000187758 Rtf1A2AQ19 715 aaKnown RBP9.7□□□□□ -0.86
Usp40-204ENSMUST00000187758 Cadps2Q8BYR5 1297 aa9.7□□□□□ -0.86
Usp40-204ENSMUST00000187758 Ttll13A4Q9F6 804 aa9.69□□□□□ -0.86
Usp40-204ENSMUST00000187758 Apbb1Q9QXJ1 710 aa9.69□□□□□ -0.86
Usp40-204ENSMUST00000187758 Ttc41Q692V3 1318 aa9.69□□□□□ -0.86
Usp40-204ENSMUST00000187758 Gas2l2Q5SSG4 860 aa9.69□□□□□ -0.86
Usp40-204ENSMUST00000187758 ZgpatQ8VDM1 511 aa9.69□□□□□ -0.86
Usp40-204ENSMUST00000187758 Kdm6aO70546 1401 aa9.69□□□□□ -0.86
Usp40-204ENSMUST00000187758 Rbm25B2RY56 838 aaKnown RBP9.68□□□□□ -0.86
Usp40-204ENSMUST00000187758 Nid2O88322 1403 aa9.68□□□□□ -0.86
Usp40-204ENSMUST00000187758 PtprvP70289 1705 aa9.68□□□□□ -0.86
Usp40-204ENSMUST00000187758 Gnai1B2RSH2 354 aa9.68□□□□□ -0.86
Usp40-204ENSMUST00000187758 Gnai3Q9DC51 354 aa9.68□□□□□ -0.86
Usp40-204ENSMUST00000187758 TkfcQ8VC30 578 aa9.67□□□□□ -0.86
Usp40-204ENSMUST00000187758 Atp7bQ64446 1462 aa9.67□□□□□ -0.86
Usp40-204ENSMUST00000187758 Zmym3Q9JLM4 1370 aa9.67□□□□□ -0.86
Usp40-204ENSMUST00000187758 Siglec1Q62230 1695 aa9.67□□□□□ -0.86
Usp40-204ENSMUST00000187758 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.67□□□□□ -0.86
Usp40-204ENSMUST00000187758 Card10P58660 1021 aa9.67□□□□□ -0.86
Usp40-204ENSMUST00000187758 Amotl2Q8K371 772 aa9.67□□□□□ -0.86
Usp40-204ENSMUST00000187758 Gm10471E9Q1C7 252 aa9.66□□□□□ -0.86
Usp40-204ENSMUST00000187758 U2surpQ6NV83 1029 aaKnown RBP9.66□□□□□ -0.86
Usp40-204ENSMUST00000187758 Acsbg1Q99PU5 721 aa9.66□□□□□ -0.86
Usp40-204ENSMUST00000187758 Cdc37l1Q9CZP7 335 aa9.66□□□□□ -0.86
Usp40-204ENSMUST00000187758 Ttc21aQ8C0S4 1314 aa9.66□□□□□ -0.86
Usp40-204ENSMUST00000187758 Ankrd50F7BE84 1390 aa9.66□□□□□ -0.86
Usp40-204ENSMUST00000187758 Ptpn23Q6PB44 1692 aa9.66□□□□□ -0.86
Usp40-204ENSMUST00000187758 Atp10bB1AWN4 1474 aa9.66□□□□□ -0.86
Usp40-204ENSMUST00000187758 Robo1O89026 1612 aa9.66□□□□□ -0.86
Usp40-204ENSMUST00000187758 Tet3Q8BG87 1668 aa9.65□□□□□ -0.86
Usp40-204ENSMUST00000187758 OptnQ8K3K8 584 aa9.65□□□□□ -0.86
Usp40-204ENSMUST00000187758 Gm6268A2A3U9 297 aa9.65□□□□□ -0.86
Usp40-204ENSMUST00000187758 CrklP47941 303 aa9.64□□□□□ -0.87
Usp40-204ENSMUST00000187758 Zranb3Q6NZP1 1069 aa9.64□□□□□ -0.87
Usp40-204ENSMUST00000187758 Senp3Q9EP97 568 aaKnown RBP9.64□□□□□ -0.87
Usp40-204ENSMUST00000187758 Txnrd1Q9JMH6 613 aa9.64□□□□□ -0.87
Usp40-204ENSMUST00000187758 Slit2Q9R1B9 1521 aa9.64□□□□□ -0.87
Usp40-204ENSMUST00000187758 Tom1O88746 492 aa9.64□□□□□ -0.87
Usp40-204ENSMUST00000187758 CastP51125 788 aa9.64□□□□□ -0.87
Usp40-204ENSMUST00000187758 Ccdc60Q8C4J0 545 aa9.64□□□□□ -0.87
Usp40-204ENSMUST00000187758 Usp16Q99LG0 825 aa9.64□□□□□ -0.87
Usp40-204ENSMUST00000187758 Mbd3Q9Z2D8 285 aaKnown RBP9.64□□□□□ -0.87
Usp40-204ENSMUST00000187758 Ccdc171E9Q1U1 1324 aa9.63□□□□□ -0.87
Usp40-204ENSMUST00000187758 SafbD3YXK2 937 aaKnown RBP9.63□□□□□ -0.87
Usp40-204ENSMUST00000187758 Rangap1P46061 589 aaKnown RBP9.63□□□□□ -0.87
Usp40-204ENSMUST00000187758 Pak3Q61036 559 aa9.63□□□□□ -0.87
Usp40-204ENSMUST00000187758 Amotl1Q9D4H4 968 aa9.63□□□□□ -0.87
Usp40-204ENSMUST00000187758 Sos1Q62245 1319 aa9.63□□□□□ -0.87
Usp40-204ENSMUST00000187758 1700019A02RikA0A087WPV9 146 aa9.63□□□□□ -0.87
Usp40-204ENSMUST00000187758 Plekhd1B2RPU2 505 aa9.62□□□□□ -0.87
Usp40-204ENSMUST00000187758 Bcl9lQ67FY2 1494 aa9.62□□□□□ -0.87
Usp40-204ENSMUST00000187758 Cdhr2E9Q7P9 1308 aa9.62□□□□□ -0.87
Usp40-204ENSMUST00000187758 Ggnbp2Q5SV77 696 aa9.62□□□□□ -0.87
Usp40-204ENSMUST00000187758 G3bp1P97855 465 aaKnown RBP9.61□□□□□ -0.87
Usp40-204ENSMUST00000187758 Ddx54Q8K4L0 874 aaKnown RBP9.61□□□□□ -0.87
Usp40-204ENSMUST00000187758 Trim58Q5NCC9 485 aa9.61□□□□□ -0.87
Usp40-204ENSMUST00000187758 Zpr1Q62384 459 aa9.61□□□□□ -0.87
Usp40-204ENSMUST00000187758 Simc1E9Q6E9 1354 aa9.61□□□□□ -0.87
Usp40-204ENSMUST00000187758 Pibf1E9Q6K3 756 aa9.61□□□□□ -0.87
Usp40-204ENSMUST00000187758 Ppp1r37Q8BKR5 712 aa9.61□□□□□ -0.87
Usp40-204ENSMUST00000187758 Klhdc4Q921I2 584 aa9.6□□□□□ -0.87
Usp40-204ENSMUST00000187758 Abca15E9PWH4 1668 aa9.6□□□□□ -0.87
Usp40-204ENSMUST00000187758 Snap23O09044 210 aa9.6□□□□□ -0.87
Usp40-204ENSMUST00000187758 Smim5Q8BT42 78 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 41.4 ms