RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Prdm10Q3UTQ7 1184 aa16.59■□□□□ 0.25
Trim50-202ENSMUST00000111180 Dnajc10Q9DC23 793 aa16.59■□□□□ 0.25
Trim50-202ENSMUST00000111180 Nckap5lQ6GQX2 1323 aa16.59■□□□□ 0.25
Trim50-202ENSMUST00000111180 Slc4a2P13808 1237 aaKnown RBP16.58■□□□□ 0.24
Trim50-202ENSMUST00000111180 Nlgn1Q99K10 843 aa16.58■□□□□ 0.24
Trim50-202ENSMUST00000111180 Fmnl2A2APV2 1086 aa16.57■□□□□ 0.24
Trim50-202ENSMUST00000111180 TatQ8QZR1 454 aa16.57■□□□□ 0.24
Trim50-202ENSMUST00000111180 Nlrp6Q91WS2 869 aa16.57■□□□□ 0.24
Trim50-202ENSMUST00000111180 Ly75Q60767 1723 aa16.57■□□□□ 0.24
Trim50-202ENSMUST00000111180 Cald1E9QA15 768 aaKnown RBP16.56■□□□□ 0.24
Trim50-202ENSMUST00000111180 Ppp6r1Q7TSI3 856 aa16.56■□□□□ 0.24
Trim50-202ENSMUST00000111180 Scn7aB1AYL1 1681 aa16.55■□□□□ 0.24
Trim50-202ENSMUST00000111180 Adamtsl1Q8BLI0 1745 aa16.55■□□□□ 0.24
Trim50-202ENSMUST00000111180 Pak3Q61036 559 aa16.54■□□□□ 0.24
Trim50-202ENSMUST00000111180 Q7TT23 1179 aa16.54■□□□□ 0.24
Trim50-202ENSMUST00000111180 Fer1l6E0CZ42 1862 aa16.53■□□□□ 0.24
Trim50-202ENSMUST00000111180 Cdk12Q14AX6 1484 aaKnown RBP16.53■□□□□ 0.24
Trim50-202ENSMUST00000111180 Hoxb7P09024 217 aa16.53■□□□□ 0.24
Trim50-202ENSMUST00000111180 Mast2Q60592 1734 aa16.52■□□□□ 0.24
Trim50-202ENSMUST00000111180 CemipQ8BI06 1361 aa16.52■□□□□ 0.24
Trim50-202ENSMUST00000111180 4930523C07RikE9Q2T4 99 aa16.52■□□□□ 0.23
Trim50-202ENSMUST00000111180 RgmbQ7TQ33 436 aa16.52■□□□□ 0.23
Trim50-202ENSMUST00000111180 Nol11Q8BJW5 723 aaKnown RBP16.52■□□□□ 0.23
Trim50-202ENSMUST00000111180 Ubr1O70481 1757 aa16.51■□□□□ 0.23
Trim50-202ENSMUST00000111180 Chd4Q6PDQ2 1915 aaKnown RBP16.51■□□□□ 0.23
Trim50-202ENSMUST00000111180 TnrQ8BYI9 1358 aa16.5■□□□□ 0.23
Trim50-202ENSMUST00000111180 Scaf1Q5U4C3 1256 aaKnown RBP16.5■□□□□ 0.23
Trim50-202ENSMUST00000111180 Nup153E9Q3G8 1462 aaKnown RBP16.49■□□□□ 0.23
Trim50-202ENSMUST00000111180 Ankrd23Q812A3 306 aa16.48■□□□□ 0.23
Trim50-202ENSMUST00000111180 VirmaA2AIV2 1811 aaKnown RBP16.47■□□□□ 0.23
Trim50-202ENSMUST00000111180 Kat6bQ8BRB7 1872 aa16.47■□□□□ 0.23
Trim50-202ENSMUST00000111180 Ddb1Q3U1J4 1140 aaKnown RBP16.47■□□□□ 0.23
Trim50-202ENSMUST00000111180 Zpr1Q62384 459 aa16.47■□□□□ 0.23
Trim50-202ENSMUST00000111180 Zcrb1Q9CZ96 217 aaKnown RBP16.47■□□□□ 0.23
Trim50-202ENSMUST00000111180 Tmem132eQ6IEE6 982 aa16.46■□□□□ 0.23
Trim50-202ENSMUST00000111180 Map2P20357 1828 aa16.46■□□□□ 0.22
Trim50-202ENSMUST00000111180 GalcP54818 684 aa16.45■□□□□ 0.22
Trim50-202ENSMUST00000111180 Vps33bP59016 617 aa16.45■□□□□ 0.22
Trim50-202ENSMUST00000111180 Apba2P98084 750 aa16.45■□□□□ 0.22
Trim50-202ENSMUST00000111180 GsdmaQ9EST1 446 aa16.45■□□□□ 0.22
Trim50-202ENSMUST00000111180 CrklP47941 303 aa16.44■□□□□ 0.22
Trim50-202ENSMUST00000111180 Mak16Q8BGS0 296 aaKnown RBP16.44■□□□□ 0.22
Trim50-202ENSMUST00000111180 OptnQ8K3K8 584 aa16.44■□□□□ 0.22
Trim50-202ENSMUST00000111180 Plekhd1B2RPU2 505 aa16.43■□□□□ 0.22
Trim50-202ENSMUST00000111180 Birc3O08863 600 aa16.43■□□□□ 0.22
Trim50-202ENSMUST00000111180 Ano8Q6PB70 1060 aa16.43■□□□□ 0.22
Trim50-202ENSMUST00000111180 Kiaa1107Q80TK0 1369 aa16.43■□□□□ 0.22
Trim50-202ENSMUST00000111180 Uhrf1bp1lA2RSJ4 1457 aa16.43■□□□□ 0.22
Trim50-202ENSMUST00000111180 GakQ99KY4 1305 aa16.43■□□□□ 0.22
Trim50-202ENSMUST00000111180 Exoc5Q3TPX4 708 aa16.42■□□□□ 0.22
Trim50-202ENSMUST00000111180 Trim28Q62318 834 aa16.42■□□□□ 0.22
Trim50-202ENSMUST00000111180 Ginm1Q91WR6 327 aa16.42■□□□□ 0.22
Trim50-202ENSMUST00000111180 Ezh2Q61188 746 aaKnown RBP16.42■□□□□ 0.22
Trim50-202ENSMUST00000111180 Ppfibp2O35711 882 aa16.41■□□□□ 0.22
Trim50-202ENSMUST00000111180 Ppp1r15aP17564 657 aa16.41■□□□□ 0.22
Trim50-202ENSMUST00000111180 Zranb3Q6NZP1 1069 aa16.41■□□□□ 0.22
Trim50-202ENSMUST00000111180 Lrit1Q8K099 624 aa16.41■□□□□ 0.22
Trim50-202ENSMUST00000111180 Rad17Q6NXW6 688 aa16.4■□□□□ 0.22
Trim50-202ENSMUST00000111180 Spef2Q8C9J3 1734 aa16.39■□□□□ 0.22
Trim50-202ENSMUST00000111180 Sik1Q60670 779 aa16.39■□□□□ 0.21
Trim50-202ENSMUST00000111180 P2rx7Q9Z1M0 595 aa16.39■□□□□ 0.21
Trim50-202ENSMUST00000111180 FancaQ9JL70 1439 aa16.39■□□□□ 0.21
Trim50-202ENSMUST00000111180 Vars2Q3U2A8 1060 aa16.38■□□□□ 0.21
Trim50-202ENSMUST00000111180 Nwd2Q6P5U7 1742 aa16.38■□□□□ 0.21
Trim50-202ENSMUST00000111180 Map4k4P97820 1233 aaKnown RBP16.37■□□□□ 0.21
Trim50-202ENSMUST00000111180 Tsen2Q6P7W5 460 aa16.37■□□□□ 0.21
Trim50-202ENSMUST00000111180 Akap11E9Q777 1895 aa16.37■□□□□ 0.21
Trim50-202ENSMUST00000111180 Znf541Q0GGX2 1363 aa16.37■□□□□ 0.21
Trim50-202ENSMUST00000111180 Zfp777B9EKF4 885 aa16.36■□□□□ 0.21
Trim50-202ENSMUST00000111180 Bsdc1Q80Y55 427 aa16.36■□□□□ 0.21
Trim50-202ENSMUST00000111180 Cc2d1aQ8K1A6 943 aa16.36■□□□□ 0.21
Trim50-202ENSMUST00000111180 Golga2Q921M4 999 aa16.36■□□□□ 0.21
Trim50-202ENSMUST00000111180 Esx1O88933 382 aa16.35■□□□□ 0.21
Trim50-202ENSMUST00000111180 Znf710Q3U288 666 aa16.35■□□□□ 0.21
Trim50-202ENSMUST00000111180 TkfcQ8VC30 578 aa16.35■□□□□ 0.21
Trim50-202ENSMUST00000111180 Usp19Q3UJD6 1360 aa16.35■□□□□ 0.21
Trim50-202ENSMUST00000111180 U2af1Q9D883 239 aaKnown RBP16.35■□□□□ 0.21
Trim50-202ENSMUST00000111180 Hoxc9P09633 260 aa16.34■□□□□ 0.21
Trim50-202ENSMUST00000111180 Ofd1Q80Z25 1017 aa16.34■□□□□ 0.21
Trim50-202ENSMUST00000111180 Q8BT18 775 aa16.34■□□□□ 0.21
Trim50-202ENSMUST00000111180 Snapc4Q8BP86 1333 aa16.34■□□□□ 0.21
Trim50-202ENSMUST00000111180 Ptpn23Q6PB44 1692 aa16.33■□□□□ 0.2
Trim50-202ENSMUST00000111180 Ccdc85cE9Q6B2 420 aa16.33■□□□□ 0.2
Trim50-202ENSMUST00000111180 Gm10471E9Q1C7 252 aa16.32■□□□□ 0.2
Trim50-202ENSMUST00000111180 Pim2Q62070 370 aa16.32■□□□□ 0.2
Trim50-202ENSMUST00000111180 Ciz1Q8VEH2 845 aa16.32■□□□□ 0.2
Trim50-202ENSMUST00000111180 PsdQ5DTT2 1024 aa16.31■□□□□ 0.2
Trim50-202ENSMUST00000111180 Mst1rQ62190 1378 aa16.31■□□□□ 0.2
Trim50-202ENSMUST00000111180 Slit1Q80TR4 1531 aa16.3■□□□□ 0.2
Trim50-202ENSMUST00000111180 Erbb3Q61526 1339 aa16.3■□□□□ 0.2
Trim50-202ENSMUST00000111180 Fchsd2Q3USJ8 740 aa16.3■□□□□ 0.2
Trim50-202ENSMUST00000111180 Ccne1Q61457 408 aa16.3■□□□□ 0.2
Trim50-202ENSMUST00000111180 Rsph6aQ8CDR2 708 aa16.3■□□□□ 0.2
Trim50-202ENSMUST00000111180 Slc12a5Q91V14 1138 aa16.3■□□□□ 0.2
Trim50-202ENSMUST00000111180 Fam50bQ9WTJ8 334 aa16.3■□□□□ 0.2
Trim50-202ENSMUST00000111180 Arhgap33Q80YF9 1305 aa16.29■□□□□ 0.2
Trim50-202ENSMUST00000111180 Mapk8ip3Q9ESN9 1337 aa16.29■□□□□ 0.2
Trim50-202ENSMUST00000111180 Kcnh4A2A5F7 1018 aa16.29■□□□□ 0.2
Trim50-202ENSMUST00000111180 Aplp2Q06335 707 aa16.29■□□□□ 0.2
Trim50-202ENSMUST00000111180 Ncbp3Q8BZR9 615 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms