RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Chpf2Q3UU43 768 aa13.62□□□□□ -0.23
Trim9-202ENSMUST00000110522 Ppp1r42Q8R1Z4 357 aa13.62□□□□□ -0.23
Trim9-202ENSMUST00000110522 Sh3bgrQ9WUZ7 214 aa13.61□□□□□ -0.23
Trim9-202ENSMUST00000110522 Ppip5k2Q6ZQB6 1129 aa13.61□□□□□ -0.23
Trim9-202ENSMUST00000110522 Rnf214Q8BFU3 668 aaKnown RBP13.61□□□□□ -0.23
Trim9-202ENSMUST00000110522 Kcnh5Q920E3 988 aa13.61□□□□□ -0.23
Trim9-202ENSMUST00000110522 Ptpdc1Q6NZK8 747 aa13.61□□□□□ -0.23
Trim9-202ENSMUST00000110522 Sbno1Q689Z5 1390 aa13.61□□□□□ -0.23
Trim9-202ENSMUST00000110522 Eif4a2P10630 407 aa13.61□□□□□ -0.23
Trim9-202ENSMUST00000110522 Gpatch11Q3UFS4 262 aa13.61□□□□□ -0.23
Trim9-202ENSMUST00000110522 Naip7Q9JIB3 1402 aa13.6□□□□□ -0.23
Trim9-202ENSMUST00000110522 PrkcshO08795 521 aa13.6□□□□□ -0.23
Trim9-202ENSMUST00000110522 Rsph6aQ8CDR2 708 aa13.6□□□□□ -0.23
Trim9-202ENSMUST00000110522 Ankrd44B2RXR6 993 aa13.6□□□□□ -0.23
Trim9-202ENSMUST00000110522 Gm973E9Q295 1059 aa13.6□□□□□ -0.23
Trim9-202ENSMUST00000110522 VgfQ0VGU4 617 aa13.6□□□□□ -0.23
Trim9-202ENSMUST00000110522 Stard3nlQ9DCI3 235 aa13.6□□□□□ -0.23
Trim9-202ENSMUST00000110522 Frmpd2A0A140LI67 1392 aa13.6□□□□□ -0.23
Trim9-202ENSMUST00000110522 Amotl2Q8K371 772 aa13.59□□□□□ -0.23
Trim9-202ENSMUST00000110522 Fmn2Q9JL04 1578 aa13.59□□□□□ -0.23
Trim9-202ENSMUST00000110522 Abca16E9PWJ7 1678 aa13.59□□□□□ -0.23
Trim9-202ENSMUST00000110522 Prim1P20664 417 aa13.59□□□□□ -0.23
Trim9-202ENSMUST00000110522 Fam83gQ5SWY7 812 aa13.59□□□□□ -0.23
Trim9-202ENSMUST00000110522 Utp3Q9JI13 469 aaKnown RBP13.59□□□□□ -0.23
Trim9-202ENSMUST00000110522 PalldQ9ET54 1408 aa13.59□□□□□ -0.23
Trim9-202ENSMUST00000110522 Wwc1Q5SXA9 1104 aa13.59□□□□□ -0.23
Trim9-202ENSMUST00000110522 PhaxQ9JJT9 385 aaKnown RBP13.59□□□□□ -0.23
Trim9-202ENSMUST00000110522 4930572O03RikQ8C5Y0 211 aa13.58□□□□□ -0.24
Trim9-202ENSMUST00000110522 Bicd2Q921C5 820 aa13.58□□□□□ -0.24
Trim9-202ENSMUST00000110522 CrcpO35427 148 aa13.58□□□□□ -0.24
Trim9-202ENSMUST00000110522 Ttc19Q8CC21 365 aa13.58□□□□□ -0.24
Trim9-202ENSMUST00000110522 Gripap1Q8VD04 806 aa13.58□□□□□ -0.24
Trim9-202ENSMUST00000110522 Kiaa1551Q5DTW7 1521 aa13.58□□□□□ -0.24
Trim9-202ENSMUST00000110522 Ints3Q7TPD0 1041 aaKnown RBP13.58□□□□□ -0.24
Trim9-202ENSMUST00000110522 Pbrm1Q8BSQ9 1634 aaKnown RBP13.58□□□□□ -0.24
Trim9-202ENSMUST00000110522 Lrrc7Q80TE7 1490 aa13.57□□□□□ -0.24
Trim9-202ENSMUST00000110522 Eva1cP58659 440 aa13.57□□□□□ -0.24
Trim9-202ENSMUST00000110522 Gnl3lQ6PGG6 577 aaKnown RBP13.57□□□□□ -0.24
Trim9-202ENSMUST00000110522 Ssh1Q76I79 1042 aa13.57□□□□□ -0.24
Trim9-202ENSMUST00000110522 TimelessQ9R1X4 1197 aa13.57□□□□□ -0.24
Trim9-202ENSMUST00000110522 Bcar3Q9QZK2 820 aa13.57□□□□□ -0.24
Trim9-202ENSMUST00000110522 Dennd4bQ3U1Y4 1499 aa13.57□□□□□ -0.24
Trim9-202ENSMUST00000110522 Zkscan1Q8BGS3 561 aaKnown RBP13.57□□□□□ -0.24
Trim9-202ENSMUST00000110522 Mast1Q9R1L5 1570 aa13.56□□□□□ -0.24
Trim9-202ENSMUST00000110522 AU022751B1B0V2 589 aa13.56□□□□□ -0.24
Trim9-202ENSMUST00000110522 Sf3b2Q3UJB0 878 aaKnown RBP13.56□□□□□ -0.24
Trim9-202ENSMUST00000110522 Map3k19E9Q3S4 1311 aa13.56□□□□□ -0.24
Trim9-202ENSMUST00000110522 Q9D9S1 216 aa13.56□□□□□ -0.24
Trim9-202ENSMUST00000110522 Eif4g3Q80XI3 1579 aaKnown RBP13.56□□□□□ -0.24
Trim9-202ENSMUST00000110522 Dhx16G3X8X0 1044 aaKnown RBP13.56□□□□□ -0.24
Trim9-202ENSMUST00000110522 Vamp4O70480 141 aa13.56□□□□□ -0.24
Trim9-202ENSMUST00000110522 Kif4P33174 1231 aa13.56□□□□□ -0.24
Trim9-202ENSMUST00000110522 BccipQ9CWI3 316 aa13.56□□□□□ -0.24
Trim9-202ENSMUST00000110522 SphkapQ6NSW3 1687 aa13.55□□□□□ -0.24
Trim9-202ENSMUST00000110522 Sytl4Q9R0Q1 673 aa13.55□□□□□ -0.24
Trim9-202ENSMUST00000110522 Fam208aQ69ZR9 1610 aaKnown RBP13.55□□□□□ -0.24
Trim9-202ENSMUST00000110522 Glipr1l2Q9CQ35 332 aa13.55□□□□□ -0.24
Trim9-202ENSMUST00000110522 Gm16486A0A1D5RMD1 1434 aa13.55□□□□□ -0.24
Trim9-202ENSMUST00000110522 Farp2Q91VS8 1065 aa13.55□□□□□ -0.24
Trim9-202ENSMUST00000110522 4933402E13RikQ9D4D2 429 aa13.55□□□□□ -0.24
Trim9-202ENSMUST00000110522 Cplx2P84086 134 aa13.55□□□□□ -0.24
Trim9-202ENSMUST00000110522 Tbc1d9Q3UYK3 1264 aa13.55□□□□□ -0.24
Trim9-202ENSMUST00000110522 Nphp4P59240 1425 aa13.55□□□□□ -0.24
Trim9-202ENSMUST00000110522 Ppp1r9bQ6R891 817 aaKnown RBP13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 FanclQ9CR14 375 aa13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 Tpm3-rs7D3Z2H9 248 aa13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 Dixdc1Q80Y83 711 aa13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 Eif3bQ8JZQ9 803 aaKnown RBP13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 Cchcr1Q8K2I2 770 aa13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 Pola1P33609 1465 aa13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 Hoxb7P09024 217 aa13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 AnlnQ8K298 1121 aaKnown RBP13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 Slc26a8Q8R0C3 999 aa13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 Top1mtQ8R4U6 593 aa13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 PaskQ8CEE6 1383 aa13.54□□□□□ -0.24
Trim9-202ENSMUST00000110522 AU019823E9PUQ3 292 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Q4VA45 678 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Ankib1Q6ZPS6 1085 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Dzip1Q8BMD2 852 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Plekhd1B2RPU2 505 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Tpd52l1O54818 204 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Zap70P43404 618 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Cplx1P63040 134 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Rrbp1Q99PL5 1605 aaKnown RBP13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Talpid3E9PV87 1520 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Rrp12Q6P5B0 1295 aaKnown RBP13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Egfem1Q8C088 590 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Brf1Q8CFK2 676 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Adam1bQ8R534 806 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Phlpp2Q8BXA7 1320 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Wdr63B2RY71 923 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Nol11Q8BJW5 723 aaKnown RBP13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 ApobrQ8VBT6 942 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Ccdc47Q9D024 483 aaKnown RBP13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Ppp1r3fQ9JIG4 799 aa13.53□□□□□ -0.24
Trim9-202ENSMUST00000110522 Eif3aP23116 1344 aaKnown RBP13.52□□□□□ -0.24
Trim9-202ENSMUST00000110522 Hs1bp3Q3TC93 395 aa13.52□□□□□ -0.24
Trim9-202ENSMUST00000110522 Flad1Q8R123 492 aa13.52□□□□□ -0.24
Trim9-202ENSMUST00000110522 Chrna2Q91X60 512 aa13.52□□□□□ -0.24
Trim9-202ENSMUST00000110522 Dnajc10Q9DC23 793 aa13.52□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 53.8 ms