RNA–Protein interactions for RNA: ENSMUST00000102823.9

Ttc39b-203, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ttc39b, Length 8,831 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-203ENSMUST00000102823 Ttc5Q99LG4 440 aa11.49□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Apaf1O88879 1249 aa11.49□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Klc3Q91W40 508 aa11.49□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Riok1Q922Q2 567 aa11.49□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Zkscan2G3X952 960 aa11.48□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Nlrp3Q8R4B8 1033 aa11.48□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Eif2s2Q99L45 331 aaKnown RBP11.48□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Dixdc1Q80Y83 711 aa11.48□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Ecm2Q5FW85 670 aa11.48□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Mum1Q6DID5 682 aa11.48□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 PalmQ9Z0P4 383 aa11.48□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 CgnP59242 1191 aa11.47□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Kdm5aQ3UXZ9 1690 aa11.47□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Ehmt1Q5DW34 1296 aa11.47□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Zfp444Q3TDV8 331 aaKnown RBP11.47□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 GnpatP98192 678 aa11.47□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Sbno1Q689Z5 1390 aa11.47□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Pdcd11Q6NS46 1862 aaKnown RBP11.46□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Cplx1P63040 134 aa11.46□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Cabp2Q9JLK4 216 aa11.46□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Col17a1Q07563 1470 aa11.46□□□□□ -0.57
Ttc39b-203ENSMUST00000102823 Slc4a3P16283 1227 aa11.46□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 BcanQ61361 883 aa11.46□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Cyp46a1Q9WVK8 500 aa11.46□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Atp10aO54827 1508 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Gsdma2Q32M21 443 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Rbm27Q5SFM8 1060 aaKnown RBP11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Fkbp5Q64378 456 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Ipo9Q91YE6 1041 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Ginm1Q91WR6 327 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 NinlQ6ZQ12 1394 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Exoc5Q3TPX4 708 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Cep152A2AUM9 1736 aaKnown RBP11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Znf335A2A5K6 1337 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Nap1l3Q794H2 544 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Tmem94Q7TSH8 1360 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Lrrc7Q80TE7 1490 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Q9D2X8 372 aa11.45□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Lamc1P02468 1607 aaKnown RBP11.44□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Prrc2bQ7TPM1 1486 aaKnown RBP11.44□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Fkbp4P30416 458 aa11.44□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Trim29Q8R2Q0 587 aa11.44□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Pcmtd1P59913 357 aa11.44□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Cdc37l1Q9CZP7 335 aa11.44□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Neurl4Q5NCX5 1563 aa11.44□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Cadps2Q8BYR5 1297 aa11.44□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Znf692Q3U381 531 aa11.44□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 NgdnQ9DB96 315 aaKnown RBP11.44□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Kdm3aQ6PCM1 1323 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Cspp1B2RX88 1205 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Mctp2Q5RJH2 878 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Hook1Q8BIL5 728 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Chmp4cQ9D7F7 232 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Usp54Q8BL06 1588 aaKnown RBP11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Ccp110Q7TSH4 1004 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Krt82Q99M74 516 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Pola1P33609 1465 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Zcchc11B2RX14 1644 aaKnown RBP11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Tpm4Q6IRU2 248 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Ripk4Q9ERK0 786 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 TnikP83510 1323 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Cep131Q62036 1060 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Smc2Q8CG48 1191 aaKnown RBP11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Fam50bQ9WTJ8 334 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Ddx58Q6Q899 926 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Q7TT23 1179 aa11.43□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Nphp1Q9QY53 687 aa11.42□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Calcoco2A2A6M5 331 aa11.42□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Cul7Q8VE73 1689 aa11.42□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Abca8bQ8K440 1620 aa11.42□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Bcl2l13P59017 434 aa11.42□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Ccne1Q61457 408 aa11.42□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Kri1Q8VDQ9 704 aaKnown RBP11.42□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.41□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Zmym4A2A791 1549 aaKnown RBP11.41□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Wwc1Q5SXA9 1104 aa11.41□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Kiaa0753Q6A000 959 aa11.41□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Ankle2Q6P1H6 964 aa11.41□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Erc1Q99MI1 1120 aa11.41□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Mroh2aD3Z750 1679 aa11.41□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Casq1O09165 405 aa11.41□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Atf7ipQ7TT18 1306 aa11.41□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Fam71e1A1L3C1 212 aa11.41□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Pank1Q8K4K6 548 aa11.41□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Rbm26Q6NZN0 1012 aaKnown RBP11.4□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Aldh1l1Q8R0Y6 902 aa11.4□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Rabep1O35551 862 aa11.4□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Dzip1Q8BMD2 852 aa11.4□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Vps53Q8CCB4 832 aa11.4□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Tpm2P58774 284 aa11.4□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Odf2lQ9D478 642 aa11.4□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Plekhg1F6S200 1446 aa11.4□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Ptch1Q61115 1434 aa11.4□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Hs1bp3Q3TC93 395 aa11.4□□□□□ -0.58
Ttc39b-203ENSMUST00000102823 Amotl1Q9D4H4 968 aa11.4□□□□□ -0.59
Ttc39b-203ENSMUST00000102823 Znf287Q9EQB9 759 aa11.4□□□□□ -0.59
Ttc39b-203ENSMUST00000102823 Sh3bgrQ9WUZ7 214 aa11.4□□□□□ -0.59
Ttc39b-203ENSMUST00000102823 Tpm1P58771 284 aa11.39□□□□□ -0.59
Ttc39b-203ENSMUST00000102823 Zfyve16Q80U44 1528 aa11.39□□□□□ -0.59
Ttc39b-203ENSMUST00000102823 CrebrfQ8CDG5 640 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms