RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Apol7cQ8C6E1 369 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Rab11fip3Q8CHD8 1047 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Neurod6P48986 337 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Ric3Q8BPM6 367 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Washc2Q6PGL7 1334 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Diaph1O08808 1255 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Ranbp1P34022 203 aaKnown RBP12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 NexnQ7TPW1 607 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Ccdc88bQ4QRL3 1481 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Mis12Q9CY25 206 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Odf2lQ9D478 642 aa12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 Wdr33Q8K4P0 1330 aaKnown RBP12.15□□□□□ -0.46
Col6a3-201ENSMUST00000056925 L1td1Q587J6 782 aaKnown RBP12.15□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Zfp91Q62511 572 aa12.14□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Babam1Q3UI43 333 aa12.14□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Prpf4bQ61136 1007 aaKnown RBP12.14□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Sox12Q04890 314 aa12.14□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Erc1Q99MI1 1120 aa12.14□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Ccdc152E9PX14 254 aa12.14□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Ncapg2Q6DFV1 1138 aa12.14□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Jade2Q6ZQF7 829 aa12.13□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Lrrcc1Q69ZB0 1026 aa12.13□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Cabp1Q9JLK7 227 aa12.13□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Q9D9S1 216 aa12.13□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Dhx16G3X8X0 1044 aaKnown RBP12.13□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Homer1Q9Z2Y3 366 aa12.13□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Stk11ipQ3TAA7 1072 aa12.13□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Ccdc93Q7TQK5 629 aa12.13□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Ccdc171E9Q1U1 1324 aa12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Fam184bQ0KK56 942 aa12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Snw1Q9CSN1 536 aaKnown RBP12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 MvpQ9EQK5 861 aa12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Ddx23D3Z0M9 819 aaKnown RBP12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Zkscan2G3X952 960 aa12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 HdgfP51859 237 aaKnown RBP12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Lrrc45Q8CIM1 670 aa12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Kif5bQ61768 963 aa12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 RpgrQ9R0X5 1001 aa12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Eif5P59325 429 aaKnown RBP12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Tubb6Q922F4 447 aa12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Ccdc42Q5SV66 316 aa12.12□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Nucb2P81117 420 aa12.11□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Fbf1A2A870 1173 aa12.11□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Stk3Q9JI10 497 aa12.11□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Gm21671G3UY31 267 aa12.11□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Ddx49Q4FZF3 480 aaKnown RBP12.11□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Tspyl2Q7TQI8 677 aa12.11□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Cecr2E9Q2Z1 1453 aa12.11□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Serpina10Q8R121 448 aa12.11□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Map7d1A2AJI0 846 aa12.11□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Ehbp1Q69ZW3 1231 aa12.11□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Specc1lQ2KN98 1118 aaKnown RBP12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Adcy5P84309 1262 aa12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Zscan10Q3URR7 782 aa12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Cux1P53564 1515 aa12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Gucy1a3Q9ERL9 691 aa12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Luzp1Q8R4U7 1068 aaKnown RBP12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 MycbpQ9EQS3 103 aa12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Gnai1B2RSH2 354 aa12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 MyclP10166 368 aa12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Cep63Q3UPP8 700 aa12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Usp16Q99LG0 825 aa12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Tex19.1Q99MV2 351 aa12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Gnai3Q9DC51 354 aa12.1□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Tango6Q8C3S2 1079 aa12.09□□□□□ -0.47
Col6a3-201ENSMUST00000056925 UvssaQ9D479 717 aa12.09□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Fan1Q69ZT1 1020 aa12.09□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Iffo1Q8BXL9 562 aa12.09□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Gbp7Q91Z40 638 aa12.09□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Dhx29Q6PGC1 1365 aaKnown RBP12.09□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Gcc1Q9D4H2 778 aa12.09□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Fmnl3Q6ZPF4 1028 aa12.09□□□□□ -0.47
Col6a3-201ENSMUST00000056925 B4galnt4Q766D5 1034 aa12.09□□□□□ -0.47
Col6a3-201ENSMUST00000056925 Capn2O08529 700 aa12.08□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Letm1Q9Z2I0 738 aa12.08□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Abcf1Q6P542 837 aaKnown RBP12.08□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Psme1P97371 249 aa12.08□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Cfap45Q9D9U9 551 aa12.08□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Tacc1Q6Y685 774 aa12.08□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Ercc6lQ8BHK9 1240 aa12.08□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Nutm1Q8BHP2 1126 aa12.08□□□□□ -0.48
Col6a3-201ENSMUST00000056925 SncbQ91ZZ3 133 aa12.07□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Vps18Q8R307 973 aa12.07□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Rpgrip1lQ8CG73 1264 aa12.07□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Rbm28Q8CGC6 750 aaKnown RBP12.07□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Tmc1Q8R4P5 757 aa12.07□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Aimp1P31230 310 aaKnown RBP12.07□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Cfap57Q9D180 1249 aa12.07□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Tshz2Q68FE9 1030 aa12.07□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Fam177a1Q8BR63 207 aa12.07□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Zfp444Q3TDV8 331 aaKnown RBP12.07□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Cep57l1Q8VDS7 400 aa12.07□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Kif3bQ61771 747 aa12.06□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Mphosph10Q810V0 681 aaKnown RBP12.06□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Ccdc38Q8CDN8 563 aa12.06□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Efcc1Q9JJF6 558 aa12.06□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Sem1P60897 70 aa12.06□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Zfp397Q7TNK4 527 aa12.06□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Gm7361D3Z6R1 267 aa12.06□□□□□ -0.48
Col6a3-201ENSMUST00000056925 Ccdc6D3YZP9 469 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms