RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Zmym3Q9JLM4 1370 aa13.7□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Ddit3P35639 168 aa13.7□□□□□ -0.22
Topbp1-201ENSMUST00000035164 RdxP26043 583 aaKnown RBP13.7□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Iffo2Q8R2V2 512 aa13.7□□□□□ -0.22
Topbp1-201ENSMUST00000035164 MecomP14404 1042 aa13.7□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Sv2bQ8BG39 683 aa13.7□□□□□ -0.22
Topbp1-201ENSMUST00000035164 EvcP57680 1005 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Aifm3Q3TY86 605 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Fam13aQ8BGI4 693 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Pof1bQ8K4L4 587 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Adam1bQ8R534 806 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Smarce1O54941 411 aaKnown RBP13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Erbb4Q61527 1308 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Edc4Q3UJB9 1406 aaKnown RBP13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Gys2Q8VCB3 704 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Setd1bQ8CFT2 1985 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Zhx1P70121 873 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Cwc27Q3TKY6 469 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Srgap3Q812A2 1099 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Naa30Q8CES0 364 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Dnajc5bQ9CQ94 199 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Plch2A2AP18 1501 aa13.69□□□□□ -0.22
Topbp1-201ENSMUST00000035164 LifrP42703 1092 aa13.68□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Zkscan2G3X952 960 aa13.68□□□□□ -0.22
Topbp1-201ENSMUST00000035164 FosbP13346 338 aa13.68□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Mcm2P97310 904 aa13.68□□□□□ -0.22
Topbp1-201ENSMUST00000035164 EappQ5BU09 281 aa13.68□□□□□ -0.22
Topbp1-201ENSMUST00000035164 KinQ8K339 391 aa13.68□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Dot1lQ6XZL8 1540 aa13.68□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Ankrd50F7BE84 1390 aa13.68□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Zscan25B2RX31 543 aa13.68□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Bach1P97302 739 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Nucb1Q02819 459 aaKnown RBP13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Rassf8Q8CJ96 419 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Gm9992B2RWK3 458 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Cers3Q1A3B0 383 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Unc93aQ710D3 458 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Kdm4cQ8VCD7 1054 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Sh3bgrQ9WUZ7 214 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Kif21bQ9QXL1 1668 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 FanciQ8K368 1330 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Ccdc173A0JLY1 547 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 AU022751B1B0V2 589 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Kif3aP28741 701 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Adcy5P84309 1262 aa13.67□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Cyp27a1Q9DBG1 533 aa13.66□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Nphp1Q9QY53 687 aa13.66□□□□□ -0.22
Topbp1-201ENSMUST00000035164 CenppQ9CZ92 286 aa13.66□□□□□ -0.22
Topbp1-201ENSMUST00000035164 F2rP30558 430 aa13.65□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Anapc15-psA0A140T8L6 141 aa13.65□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Ptpdc1Q6NZK8 747 aa13.65□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Sh3bp5Q9Z131 463 aa13.65□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Cnnm3Q32NY4 713 aa13.65□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Ppp6r3Q922D4 844 aa13.65□□□□□ -0.22
Topbp1-201ENSMUST00000035164 Cabp4Q8VHC5 271 aa13.65□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Pes1Q9EQ61 584 aaKnown RBP13.65□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Lamc1P02468 1607 aaKnown RBP13.65□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Txndc2Q6P902 515 aa13.64□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Vgll3P85442 326 aa13.64□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Nap1l3Q794H2 544 aa13.64□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Prune1Q8BIW1 454 aa13.64□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Gprasp1Q5U4C1 1347 aa13.64□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Cspp1B2RX88 1205 aa13.64□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Pdcl2Q78Y63 240 aa13.64□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Arhgef11Q68FM7 1552 aa13.64□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Bicd2Q921C5 820 aa13.63□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Abcc6Q9R1S7 1498 aa13.63□□□□□ -0.23
Topbp1-201ENSMUST00000035164 AI481877A2ALV5 1481 aa13.63□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Col17a1Q07563 1470 aa13.62□□□□□ -0.23
Topbp1-201ENSMUST00000035164 AnlnQ8K298 1121 aaKnown RBP13.62□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Zkscan16A2ALW2 728 aa13.62□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Gnai2P08752 355 aaKnown RBP13.62□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.62□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Ppp1r42Q8R1Z4 357 aa13.62□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Tceal9Q9DD24 104 aa13.62□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Nsd3Q6P2L6 1439 aa13.62□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Bcl2l13P59017 434 aa13.61□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Psme1P97371 249 aa13.61□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Fchsd2Q3USJ8 740 aa13.61□□□□□ -0.23
Topbp1-201ENSMUST00000035164 CebpzP53569 1052 aaKnown RBP13.61□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Dhx30Q99PU8 1217 aaKnown RBP13.61□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Slx4ipQ9D7Y9 413 aa13.61□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Ttc21aQ8C0S4 1314 aa13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Cfdp1O88271 295 aaKnown RBP13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 EzrP26040 586 aaKnown RBP13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Mindy4Q3UQI9 744 aa13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Fam43aQ8BUP8 424 aa13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Mmel1Q9JLI3 765 aa13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Hvcn1Q3U2S8 269 aa13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Ints3Q7TPD0 1041 aaKnown RBP13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Fancd2Q80V62 1450 aa13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Map3k13Q1HKZ5 959 aa13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 NinlQ6ZQ12 1394 aa13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Adamts12Q811B3 1600 aa13.6□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Wdr78E9PYY5 807 aa13.59□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Scaf11E9PZM7 1456 aaKnown RBP13.59□□□□□ -0.23
Topbp1-201ENSMUST00000035164 TmpoQ61033 693 aaKnown RBP13.59□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Zpr1Q62384 459 aa13.59□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Snx13Q6PHS6 957 aa13.59□□□□□ -0.23
Topbp1-201ENSMUST00000035164 Taf3Q5HZG4 932 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms