RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Senp3Q9EP97 568 aaKnown RBP10.49□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Phlpp2Q8BXA7 1320 aa10.49□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Ino80Q6ZPV2 1559 aa10.49□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Rsph3aQ3UFY4 516 aa10.49□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Hecw2Q6I6G8 1578 aa10.49□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Cfap65Q3V0B4 1847 aa10.49□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Kif18aQ91WD7 886 aa10.49□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Pik3r4Q8VD65 1358 aa10.48□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Ankrd44B2RXR6 993 aa10.47□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Tnnt1O88346 262 aa10.47□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Q3UPC7 1272 aa10.47□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Egfem1Q8C088 590 aa10.47□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Sptbn5F6UCX4 1208 aa10.47□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Gm10563F6WIE4 79 aa10.47□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Znf326O88291 580 aa10.47□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Med14A2ABV5 1459 aaKnown RBP10.47□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Fmnl2A2APV2 1086 aa10.47□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Smarce1O54941 411 aaKnown RBP10.47□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Ehbp1l1Q99MS7 1716 aa10.47□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Atp6v1dP57746 247 aa10.46□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Irx3P81067 507 aa10.46□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 ScaperF8VQ70 1398 aaKnown RBP10.46□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Adgrl1Q80TR1 1466 aa10.46□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 GorabQ8BRM2 368 aa10.46□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Kcnh5Q920E3 988 aa10.46□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Tmem131lQ3U3D7 1597 aa10.46□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Gas2l2Q5SSG4 860 aa10.46□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 CarsQ9ER72 831 aaKnown RBP10.46□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Asxl2Q8BZ32 1370 aa10.46□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 1700010I14RikQ7TPG0 532 aa10.45□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Cyp46a1Q9WVK8 500 aa10.45□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Gnai2P08752 355 aaKnown RBP10.44□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Ppp1r9bQ6R891 817 aaKnown RBP10.44□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Vamp4O70480 141 aa10.44□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Eif4a2P10630 407 aa10.44□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 P2rx7Q9Z1M0 595 aa10.44□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Frmpd2A0A140LI67 1392 aa10.44□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Bcl11aQ9QYE3 773 aa10.44□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Nek4Q9Z1J2 792 aa10.44□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Tnpo1Q8BFY9 898 aaKnown RBP10.44□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Cog6Q8R3I3 657 aa10.44□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Tceal9Q9DD24 104 aa10.43□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Tbc1d32Q3URV1 1296 aa10.43□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Nrxn1Q9CS84 1514 aa10.42□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Uhrf1bp1B2KF50 1429 aa10.42□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Chmp7Q8R1T1 451 aa10.42□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Trim44Q9QXA7 346 aa10.42□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Zkscan2G3X952 960 aa10.42□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 PsapQ61207 557 aaKnown RBP10.42□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Aldh1l2Q8K009 923 aa10.42□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 LifrP42703 1092 aa10.42□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Casq1O09165 405 aa10.41□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 PtpruB1AUH1 1446 aa10.41□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Nphp1Q9QY53 687 aa10.41□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Ggnbp2Q5SV77 696 aa10.41□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Znf541Q0GGX2 1363 aa10.41□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 TimelessQ9R1X4 1197 aa10.4□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Atf3Q60765 181 aa10.4□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 TkfcQ8VC30 578 aa10.4□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Mcm10Q0VBD2 885 aa10.4□□□□□ -0.74
Sf3b1-201ENSMUST00000027127 Q4VA45 678 aa10.4□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Nsd3Q6P2L6 1439 aa10.39□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Q9D2X8 372 aa10.39□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 PtmaP26350 111 aa10.39□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Slc4a10Q5DTL9 1118 aa10.39□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Ccne1Q61457 408 aa10.39□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Iqsec2Q5DU25 1478 aa10.39□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Eif3aP23116 1344 aaKnown RBP10.39□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Brd1E9PZ26 1189 aaKnown RBP10.39□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Rlbp1Q9Z275 317 aa10.39□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Znf521Q6KAS7 1311 aa10.38□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 PtprmP28828 1452 aa10.38□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Nkx1-2P42580 305 aa10.38□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Tubgcp6G5E8P0 1769 aa10.38□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Lmod3E9QA62 571 aa10.38□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Cc2d1aQ8K1A6 943 aa10.38□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Tmem94Q7TSH8 1360 aa10.38□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Dip2aQ8BWT5 1523 aa10.38□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Trpm1Q2TV84 1622 aa10.38□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Anapc15-psA0A140T8L6 141 aa10.38□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Aldh8a1Q8BH00 487 aa10.38□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.37□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Atp7bQ64446 1462 aa10.37□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Cdk5rap2Q8K389 1822 aa10.37□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Wdr63B2RY71 923 aa10.37□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Ythdc1E9Q5K9 736 aaKnown RBP10.37□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Erc2Q6PH08 957 aa10.37□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Gemin5Q8BX17 1502 aaKnown RBP10.37□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Prkar2bP31324 416 aa10.37□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Glipr1l2Q9CQ35 332 aa10.37□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Gm10471E9Q1C7 252 aa10.37□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Uhrf1bp1lA2RSJ4 1457 aa10.36□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 KinQ8K339 391 aa10.36□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Rfx1P48377 963 aa10.36□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Trim27Q62158 513 aa10.36□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 St18Q80TY4 1045 aa10.36□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Amotl1Q9D4H4 968 aa10.36□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Filip1lQ6P6L0 1131 aa10.36□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 Cfdp1O88271 295 aaKnown RBP10.35□□□□□ -0.75
Sf3b1-201ENSMUST00000027127 AdgbG3UZ78 1657 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms