RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Chd4Q6PDQ2 1915 aaKnown RBP31.31■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 Tmco5bQ80X59 307 aa31.3■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 MvpQ9EQK5 861 aa31.3■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 Wwc1Q5SXA9 1104 aa31.29■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 Cabp2Q9JLK4 216 aa31.29■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 Q3UJC8 639 aa31.28■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 Zfp777B9EKF4 885 aa31.28■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 CemipQ8BI06 1361 aa31.27■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 Rabep1O35551 862 aa31.27■■■□□ 2.6
Cldnd1-201ENSMUST00000023426 Stk31Q99MW1 1018 aa31.26■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Ankrd44B2RXR6 993 aa31.25■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Usp16Q99LG0 825 aa31.25■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 N4bp2F8VQG7 1678 aaKnown RBP31.25■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Med1Q925J9 1575 aa31.25■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Eif4a2P10630 407 aa31.25■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Nectin2P32507 530 aa31.25■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Sptbn5F6UCX4 1208 aa31.24■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Safb2Q80YR5 991 aaKnown RBP31.24■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Mcm10Q0VBD2 885 aa31.23■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Rreb1Q3UH06 1700 aaKnown RBP31.22■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Pnmal2G3X9N3 661 aa31.22■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Rangap1P46061 589 aaKnown RBP31.22■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Nutm1Q8BHP2 1126 aa31.22■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Kif18aQ91WD7 886 aa31.22■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Rims2Q9EQZ7 1530 aa31.21■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 KnstrnQ9D9Z1 312 aaKnown RBP31.21■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 Brd1E9PZ26 1189 aaKnown RBP31.2■■■□□ 2.59
Cldnd1-201ENSMUST00000023426 DaxxO35613 739 aa31.19■■■□□ 2.58
Cldnd1-201ENSMUST00000023426 MarsQ68FL6 902 aaKnown RBP31.19■■■□□ 2.58
Cldnd1-201ENSMUST00000023426 Dnajc5gQ8C632 165 aa31.18■■■□□ 2.58
Cldnd1-201ENSMUST00000023426 Cetn4Q8K4K1 168 aa31.18■■■□□ 2.58
Cldnd1-201ENSMUST00000023426 NalcnQ8BXR5 1738 aa31.18■■■□□ 2.58
Cldnd1-201ENSMUST00000023426 Cdk12Q14AX6 1484 aaKnown RBP31.17■■■□□ 2.58
Cldnd1-201ENSMUST00000023426 Htatsf1Q8BGC0 757 aa31.14■■■□□ 2.58
Cldnd1-201ENSMUST00000023426 DiexfQ8BTT6 772 aaKnown RBP31.14■■■□□ 2.58
Cldnd1-201ENSMUST00000023426 LifrP42703 1092 aa31.13■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 Ecm2Q5FW85 670 aa31.13■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 U2surpQ6NV83 1029 aaKnown RBP31.13■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 MpripP97434 1024 aa31.13■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 Tnpo1Q8BFY9 898 aaKnown RBP31.12■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 Lmtk3Q5XJV6 1424 aa31.12■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 Mfap1aC0HKD8 439 aaKnown RBP31.1■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 Mfap1bC0HKD9 439 aaKnown RBP31.1■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 Aldh1l2Q8K009 923 aa31.1■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 Pdlim2Q8R1G6 349 aa31.09■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 Kif20bQ80WE4 1774 aaKnown RBP31.09■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 Ric3Q8BPM6 367 aa31.08■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 Mon2Q80TL7 1715 aa31.08■■■□□ 2.57
Cldnd1-201ENSMUST00000023426 Cog6Q8R3I3 657 aa31.07■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 HnrnpuQ8VEK3 800 aaKnown RBP31.07■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Abcc10Q8R4P9 1501 aa31.07■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 D430041D05RikF6ZGR6 1678 aa31.07■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Rad17Q6NXW6 688 aa31.07■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 TmpoQ61033 693 aaKnown RBP31.06■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Plin1Q8CGN5 517 aa31.06■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Slit2Q9R1B9 1521 aa31.06■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Col16a1Q8BLX7 1580 aa31.06■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Klhdc4Q921I2 584 aa31.06■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Chl1P70232 1209 aa31.05■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Cgnl1Q6AW69 1298 aa31.05■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Scaf1Q5U4C3 1256 aaKnown RBP31.04■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Pik3c2aQ61194 1686 aa31.04■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Ubr1O70481 1757 aa31.04■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 NgefQ8CHT1 710 aa31.04■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Rab11fip3Q8CHD8 1047 aa31.03■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Trim27Q62158 513 aa31.01■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Dennd6aQ8BH65 605 aa31.01■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 CarsQ9ER72 831 aaKnown RBP31.01■■■□□ 2.56
Cldnd1-201ENSMUST00000023426 Wdr63B2RY71 923 aa31.01■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Als2Q920R0 1651 aa31.01■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Senp3Q9EP97 568 aaKnown RBP31■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 C5P06684 1680 aa31■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 4930407I10RikD3Z5T8 1512 aa31■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Kif24Q6NWW5 1356 aa31■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Idi1P58044 227 aa31■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Aldh8a1Q8BH00 487 aa31■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Adgrb1Q3UHD1 1582 aa30.99■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Kif2cQ922S8 721 aa30.99■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 4933416C03RikQ3V063 378 aa30.98■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Nlgn1Q99K10 843 aa30.97■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Map2P20357 1828 aa30.97■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Scn7aB1AYL1 1681 aa30.96■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Rtf1A2AQ19 715 aaKnown RBP30.95■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 ArxO35085 564 aa30.95■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Eif4g2Q62448 906 aaKnown RBP30.95■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Ap3b2Q9JME5 1082 aa30.95■■■□□ 2.55
Cldnd1-201ENSMUST00000023426 Tet3Q8BG87 1668 aa30.95■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Camta1A2A891 1682 aa30.94■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Tm6sf1P58749 370 aa30.94■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Ptpn23Q6PB44 1692 aa30.94■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Gcc1Q9D4H2 778 aa30.94■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Cabp4Q8VHC5 271 aa30.93■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Bcl9Q9D219 1425 aa30.93■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Gm10563F6WIE4 79 aa30.92■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Mcm2P97310 904 aa30.92■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Gm10093D3YYI8 482 aa30.92■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Hdac1O09106 482 aaKnown RBP30.92■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Frmpd2A0A140LI67 1392 aa30.92■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 FancaQ9JL70 1439 aa30.91■■■□□ 2.54
Cldnd1-201ENSMUST00000023426 Eya1P97767 591 aa30.91■■■□□ 2.54
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms