RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 SkilQ60665 675 aa15.06■□□□□ 0
Ufd1-201ENSMUST00000005394 Armcx1Q9CX83 456 aa15.06■□□□□ 0
Ufd1-201ENSMUST00000005394 FanciQ8K368 1330 aa15.06■□□□□ 0
Ufd1-201ENSMUST00000005394 Brd1E9PZ26 1189 aaKnown RBP15.05■□□□□ 0
Ufd1-201ENSMUST00000005394 Dhx16G3X8X0 1044 aaKnown RBP15.05■□□□□ 0
Ufd1-201ENSMUST00000005394 Ksr2Q3UVC0 959 aa15.05■□□□□ 0
Ufd1-201ENSMUST00000005394 P2rx7Q9Z1M0 595 aa15.05■□□□□ 0
Ufd1-201ENSMUST00000005394 AU022751B1B0V2 589 aa15.05■□□□□ -0
Ufd1-201ENSMUST00000005394 Arhgef28P97433 1693 aa15.05■□□□□ -0
Ufd1-201ENSMUST00000005394 Scaf1Q5U4C3 1256 aaKnown RBP15.04■□□□□ -0
Ufd1-201ENSMUST00000005394 MaddQ80U28 1577 aa15.04■□□□□ -0
Ufd1-201ENSMUST00000005394 Q9D9H8 365 aa15.04■□□□□ -0
Ufd1-201ENSMUST00000005394 Slit3Q9WVB4 1523 aa15.03■□□□□ -0
Ufd1-201ENSMUST00000005394 AU019823E9PUQ3 292 aa15.03■□□□□ -0
Ufd1-201ENSMUST00000005394 Gse1Q3U3C9 1213 aa15.03■□□□□ -0
Ufd1-201ENSMUST00000005394 Nsfl1cQ9CZ44 370 aaKnown RBP15.03■□□□□ -0
Ufd1-201ENSMUST00000005394 InsrP15208 1372 aa15.03■□□□□ -0
Ufd1-201ENSMUST00000005394 Cetn4Q8K4K1 168 aa15.02■□□□□ -0
Ufd1-201ENSMUST00000005394 Uhrf1bp1B2KF50 1429 aa15.02□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Tmx3Q8BXZ1 456 aa15.02□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Ccdc171E9Q1U1 1324 aa15.01□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Evi5lH3BKQ3 813 aa15.01□□□□□ -0.01
Ufd1-201ENSMUST00000005394 VgfQ0VGU4 617 aa15.01□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Shq1Q7TMX5 569 aa15.01□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Fez1Q8K0X8 392 aa15.01□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Plxnc1Q9QZC2 1574 aa15.01□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Tns3Q5SSZ5 1440 aa15.01□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Srpk2O54781 681 aaKnown RBP15□□□□□ -0.01
Ufd1-201ENSMUST00000005394 SlkO54988 1233 aa15□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Ttc21aQ8C0S4 1314 aa15□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Col18a1P39061 1774 aa15□□□□□ -0.01
Ufd1-201ENSMUST00000005394 CastP51125 788 aa15□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Brinp3Q499E0 766 aa15□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Taok2Q6ZQ29 1240 aa15□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Slain2Q8CI08 581 aa15□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Cog6Q8R3I3 657 aa14.99□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Cluap1Q8R3P7 413 aa14.98□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Ripk4Q9ERK0 786 aa14.98□□□□□ -0.01
Ufd1-201ENSMUST00000005394 PaskQ8CEE6 1383 aa14.98□□□□□ -0.01
Ufd1-201ENSMUST00000005394 ImpactO55091 318 aa14.98□□□□□ -0.01
Ufd1-201ENSMUST00000005394 LifrP42703 1092 aa14.98□□□□□ -0.01
Ufd1-201ENSMUST00000005394 1700010I14RikQ7TPG0 532 aa14.98□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Ush1cQ9ES64 910 aa14.98□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Tom1O88746 492 aa14.97□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Ppp1r3fQ9JIG4 799 aa14.97□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Chmp4bQ9D8B3 224 aaKnown RBP14.96□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Ift172Q6VH22 1749 aa14.96□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Lekr1B2RVN1 116 aa14.96□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Os9Q8K2C7 672 aa14.96□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Polr3glQ8R0C0 218 aa14.96□□□□□ -0.01
Ufd1-201ENSMUST00000005394 HnrnpmQ9D0E1 729 aaKnown RBP14.96□□□□□ -0.01
Ufd1-201ENSMUST00000005394 Nrxn1Q9CS84 1514 aa14.96□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Ankrd50F7BE84 1390 aa14.95□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Wdr63B2RY71 923 aa14.95□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Rfx1P48377 963 aa14.95□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Maco1Q7TQE6 664 aaKnown RBP14.95□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Bag4Q8CI61 457 aa14.95□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Pik3r4Q8VD65 1358 aa14.95□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Casq1O09165 405 aa14.94□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Apaf1O88879 1249 aa14.94□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Fan1Q69ZT1 1020 aa14.94□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Gimap5Q8BWF2 308 aa14.94□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Usp32F8VPZ3 1604 aa14.94□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Tsen2Q6P7W5 460 aa14.93□□□□□ -0.02
Ufd1-201ENSMUST00000005394 PtmsQ9D0J8 101 aaKnown RBP14.93□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Tmem94Q7TSH8 1360 aa14.93□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Becn1O88597 448 aa14.93□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Mknk2Q8CDB0 459 aa14.93□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Anapc15-psA0A140T8L6 141 aa14.92□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Puf60Q3UEB3 564 aaKnown RBP14.92□□□□□ -0.02
Ufd1-201ENSMUST00000005394 U2af1Q9D883 239 aaKnown RBP14.92□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Erbb4Q61527 1308 aa14.92□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Pdia4P08003 638 aaKnown RBP14.91□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Cavin4A2AMM0 362 aa14.91□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Tbc1d9Q3UYK3 1264 aa14.91□□□□□ -0.02
Ufd1-201ENSMUST00000005394 GapdhsQ64467 440 aa14.91□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Cgnl1Q6AW69 1298 aa14.91□□□□□ -0.02
Ufd1-201ENSMUST00000005394 EngaseQ8BX80 734 aa14.91□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Bloc1s4Q8VED2 215 aa14.9□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Arap3Q8R5G7 1538 aa14.9□□□□□ -0.02
Ufd1-201ENSMUST00000005394 Atp7bQ64446 1462 aa14.89□□□□□ -0.03
Ufd1-201ENSMUST00000005394 G3bp1P97855 465 aaKnown RBP14.89□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Atf3Q60765 181 aa14.89□□□□□ -0.03
Ufd1-201ENSMUST00000005394 DekQ7TNV0 380 aaKnown RBP14.89□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Zkscan1Q8BGS3 561 aaKnown RBP14.89□□□□□ -0.03
Ufd1-201ENSMUST00000005394 CenppQ9CZ92 286 aa14.89□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Tfip11Q9ERA6 838 aaKnown RBP14.89□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Irf5P56477 497 aa14.88□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Aldh1l1Q8R0Y6 902 aa14.88□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Stk26Q99JT2 416 aa14.87□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Trim26Q99PN3 545 aa14.87□□□□□ -0.03
Ufd1-201ENSMUST00000005394 MvpQ9EQK5 861 aa14.87□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Aldh8a1Q8BH00 487 aa14.87□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Ccdc60Q8C4J0 545 aa14.87□□□□□ -0.03
Ufd1-201ENSMUST00000005394 4931400O07RikQ9D4M5 137 aa14.87□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Fchsd2Q3USJ8 740 aa14.86□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Rbm10Q99KG3 930 aaKnown RBP14.86□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Glipr1l2Q9CQ35 332 aa14.86□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Slc52a2Q9D8F3 450 aa14.86□□□□□ -0.03
Ufd1-201ENSMUST00000005394 Mdc1Q5PSV9 1707 aa14.86□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 75.6 ms