RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 PGS1Q32NB8 556 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 DCAF12L1Q5VU92 463 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 LRRC74BQ6ZQY2 392 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 C16orf59Q7L2K0 433 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 CCDC185Q8N715 623 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 CORO1BQ9BR76 489 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 ASB3Q9Y575 518 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-208ENST00000430669 JAG1P78504 1218 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 PPIDQ08752 370 aaKnown RBP11.62□□□□□ -0.55
PTCH1-208ENST00000430669 RP9Q8TA86 221 aaKnown RBP11.62□□□□□ -0.55
PTCH1-208ENST00000430669 TLCD1Q96CP7 247 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 DPY30Q9C005 99 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 PIH1D1Q9NWS0 290 aaKnown RBP11.62□□□□□ -0.55
PTCH1-208ENST00000430669 OTCP00480 354 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 PHKG1Q16816 387 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 IFNEQ86WN2 208 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 TRIM69Q86WT6 500 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 MPP5Q8N3R9 675 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 SUSD6Q92537 303 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 TXNRD2Q9NNW7 524 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 R3HDM2Q9Y2K5 976 aaKnown RBP11.62□□□□□ -0.55
PTCH1-208ENST00000430669 SLC27A5Q9Y2P5 690 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 A0A088AWK7 358 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 SLC28A1O00337 649 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 PCDH8O95206 1070 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 ZNF10P21506 573 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-208ENST00000430669 GNA13Q14344 377 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 ZBTB10Q96DT7 871 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 ZNF599Q96NL3 588 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 SPAG4Q9NPE6 437 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 ARL15Q9NXU5 204 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 LRCH1Q9Y2L9 728 aa11.62□□□□□ -0.55
PTCH1-208ENST00000430669 IGKV6D-21A0A0A0MT36 114 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 BBIP1A8MTZ0 92 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 WFS1O76024 890 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 GUCA1CO95843 209 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 ELNP15502 786 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 HALP42357 657 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 PHACTR4Q8IZ21 702 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 TADA1Q96BN2 335 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 ZFRQ96KR1 1074 aaKnown RBP11.61□□□□□ -0.55
PTCH1-208ENST00000430669 PPP3R2Q96LZ3 170 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 DEFB118Q96PH6 123 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 MUC13Q9H3R2 512 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 NDST3O95803 873 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 CORO1AP31146 461 aaKnown RBP11.61□□□□□ -0.55
PTCH1-208ENST00000430669 SLC25A11Q02978 314 aaKnown RBP11.61□□□□□ -0.55
PTCH1-208ENST00000430669 PRKCZQ05513 592 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 DMC1Q14565 340 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 RALGPS1Q5JS13 557 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 RASAL3Q86YV0 1011 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 RFWD2Q8NHY2 731 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 KCTD5Q9NXV2 234 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 PRPF19Q9UMS4 504 aaKnown RBP11.61□□□□□ -0.55
PTCH1-208ENST00000430669 SLC22A2O15244 555 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 HDAC3O15379 428 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 ENDOD1O94919 500 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 ACLYP53396 1101 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 CRADDP78560 199 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 CRY1Q16526 586 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 EID3Q8N140 333 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 ACOX2Q99424 681 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 ALG9Q9H6U8 611 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 DCXO43602 365 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 LBPP18428 481 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 WNT3AP56704 352 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 SEMA5AQ13591 1074 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 LRRC36Q1X8D7 754 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 TTC33Q6PID6 262 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-208ENST00000430669 PACS1Q6VY07 963 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 DQX1Q8TE96 717 aaKnown RBP11.61□□□□□ -0.55
PTCH1-208ENST00000430669 C7orf26Q96N11 449 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 SHCBP1LQ9BZQ2 653 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 TMPRSS4Q9NRS4 437 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 ATAD3AQ9NVI7 634 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 MRPS23Q9Y3D9 190 aaKnown RBP11.61□□□□□ -0.55
PTCH1-208ENST00000430669 PIGNO95427 931 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 BTKQ06187 659 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 LEMD2Q8NC56 503 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 C9orf16Q9BUW7 83 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 MRM3Q9HC36 420 aaKnown RBP11.61□□□□□ -0.55
PTCH1-208ENST00000430669 GRHL1Q9NZI5 618 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 FAM50BQ9Y247 325 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 PAPSS1O43252 624 aaPredicted RBP11.61□□□□□ -0.55
PTCH1-208ENST00000430669 MAP3K13O43283 966 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 ACAP2Q15057 778 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 RTL3Q8N8U3 475 aaKnown RBP11.61□□□□□ -0.55
PTCH1-208ENST00000430669 SKA1Q96BD8 255 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 DNAJC28Q9NX36 388 aa11.61□□□□□ -0.55
PTCH1-208ENST00000430669 ARVCFO00192 962 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 INHAP05111 366 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 SNRPB2P08579 225 aaKnown RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 DHFR2Q86XF0 187 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 GALNT4Q8N4A0 578 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 MCCC1Q96RQ3 725 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 WDR41Q9HAD4 459 aa11.6□□□□□ -0.55
PTCH1-208ENST00000430669 TRMT13Q9NUP7 481 aaKnown RBP11.6□□□□□ -0.55
PTCH1-208ENST00000430669 BAIAP3O94812 1187 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms