RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 PCDHGA9Q9Y5G4 932 aaKnown RBP6.29□□□□□ -1.4
NFKB1-203ENST00000502367 PCDHGA8Q9Y5G5 932 aa6.29□□□□□ -1.4
NFKB1-203ENST00000502367 PCDHGA7Q9Y5G6 932 aa6.29□□□□□ -1.4
NFKB1-203ENST00000502367 PCDHGA6Q9Y5G7 932 aa6.29□□□□□ -1.4
NFKB1-203ENST00000502367 PCDHGA3Q9Y5H0 932 aa6.29□□□□□ -1.4
NFKB1-203ENST00000502367 COL4A4P53420 1690 aaPredicted RBP6.29□□□□□ -1.4
NFKB1-203ENST00000502367 A0A087X1B8 175 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 A0A1B0GUA9 196 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 MYADML2A6NDP7 307 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 MANSC4A6NHS7 340 aaPredicted RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 PPEF2O14830 753 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 TP73O15350 636 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 TTI1O43156 1089 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 THAP12O43422 761 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 SUV39H1O43463 412 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 PROSCO94903 275 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 PEX11BO96011 259 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 AMY1AP04745 511 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 MYBL1P10243 752 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 TCF4P15884 667 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 AGXTP21549 392 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 MMP8P22894 467 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 MCM3P25205 808 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 CYP2C19P33261 490 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 HSPA9P38646 679 aaKnown RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 RAD23BP54727 409 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 GSCP56915 257 aaPredicted RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 CLRN1P58418 232 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 TFAMQ00059 246 aaKnown RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 GUCY2DQ02846 1103 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 TNFAIP2Q03169 654 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 MAMLD1Q13495 774 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 ZBTB6Q15916 424 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 SGSM1Q2NKQ1 1148 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 INAVAQ3KP66 663 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 TIGD2Q4W5G0 525 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 DAB2IPQ5VWQ8 1189 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 DUPD1Q68J44 220 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 EMBQ6PCB8 327 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 ZDHHC24Q6UX98 284 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 SCARA5Q6ZMJ2 495 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 MMS22LQ6ZRQ5 1243 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 MED25Q71SY5 747 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 PDZD4Q76G19 769 aaPredicted RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 ZNF410Q86VK4 478 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 SLC13A5Q86YT5 568 aaPredicted RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 ULK2Q8IYT8 1036 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 EIF1ADQ8N9N8 165 aaKnown RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 SLC4A11Q8NBS3 891 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 C1orf131Q8NDD1 294 aaKnown RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 JADE3Q92613 823 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 ZBTB9Q96C00 473 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 FAXDC2Q96IV6 333 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 VCPIP1Q96JH7 1222 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 SNX27Q96L92 541 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 ZMAT2Q96NC0 199 aaKnown RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 AGAP2Q99490 1192 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 EIF2AQ9BY44 585 aaKnown RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 SENP6Q9GZR1 1112 aaPredicted RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 SMYD3Q9H7B4 428 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 RPF1Q9H9Y2 349 aaKnown RBP6.28□□□□□ -1.4
NFKB1-203ENST00000502367 ZDHHC18Q9NUE0 388 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 GRHL1Q9NZI5 618 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 AMACRQ9UHK6 382 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 TUBD1Q9UJT1 453 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 NFU1Q9UMS0 254 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 HS3ST4Q9Y661 456 aa6.28□□□□□ -1.4
NFKB1-203ENST00000502367 SMIM35A0A1B0GVV1 85 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 TMEM191CA6NGB0 347 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 H0YGN5 161 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 TRIM24O15164 1050 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 ABHD16AO95870 558 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 TNNC2P02585 160 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 ITGB1P05556 798 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 WEE2P0C1S8 567 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 TMEM191BP0C7N4 346 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 CD58P19256 250 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 MAN1A1P33908 653 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 PTGS2P35354 604 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 CDH8P55286 799 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 BEX3Q00994 111 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 DMTNQ08495 405 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 INCA1Q0VD86 236 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 ACAP2Q15057 778 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 PCBP2Q15366 365 aaKnown RBP eCLIP6.27□□□□□ -1.416e-6■□□□□ 10.3
NFKB1-203ENST00000502367 ZNF699Q32M78 642 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 MAP9Q49MG5 647 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 PTPN20Q4JDL3 420 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 TTMPQ5BVD1 217 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 XKR4Q5GH76 650 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 UBAP2Q5T6F2 1119 aaKnown RBP6.27□□□□□ -1.41
NFKB1-203ENST00000502367 LAIR1Q6GTX8 287 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 RGMBQ6NW40 437 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 PCSK4Q6UW60 755 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 ALKAL1Q6UXT8 129 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 TLK2Q86UE8 772 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 IFT20Q8IY31 132 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 IQCKQ8N0W5 287 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 ARFGAP1Q8N6T3 406 aa6.27□□□□□ -1.41
NFKB1-203ENST00000502367 C1orf162Q8NEQ5 155 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms