RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 CUEDC2Q9H467 287 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 ZFAND3Q9H8U3 227 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 TMEM8AQ9HCN3 771 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 ANLNQ9NQW6 1124 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 MBNL1Q9NR56 388 aaKnown RBP5.84□□□□□ -1.47
KDM3B-205ENST00000508386 RAB20Q9NX57 234 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 NCKIPSDQ9NZQ3 722 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 GULP1Q9UBP9 304 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 MTMR6Q9Y217 621 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 TRAF3IP3Q9Y228 551 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 HS3ST2Q9Y278 367 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 ITM2BQ9Y287 266 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 ACTL7AQ9Y615 435 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 SHANK1Q9Y566 2161 aa5.84□□□□□ -1.47
KDM3B-205ENST00000508386 ARHGEF17Q96PE2 2063 aaPredicted RBP5.84□□□□□ -1.47
KDM3B-205ENST00000508386 TACC2O95359 2948 aa5.84□□□□□ -1.48
KDM3B-205ENST00000508386 A0A0D9SEW6 157 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 A0A1W2PQ27 194 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 A0A1W2PQ64 194 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 A0A1W2PQC6 194 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 MAPK13O15264 365 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 B4GAT1O43505 415 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 DUX1O43812 170 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 LEFTY1O75610 366 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 CD160O95971 181 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 KRT7P08729 469 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 VDRP11473 427 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 FGF3P11487 239 aaPredicted RBP5.83□□□□□ -1.48
KDM3B-205ENST00000508386 ADRB3P13945 408 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 CD19P15391 556 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 ZNF18P17022 549 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 GNLYP22749 145 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 ITGB7P26010 798 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 GKP32189 559 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 NNMTP40261 264 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 RABIFP47224 123 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 MAPK10P53779 464 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 RPS21P63220 83 aaKnown RBP5.83□□□□□ -1.48
KDM3B-205ENST00000508386 SULT2A1Q06520 285 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 EIF3IQ13347 325 aaKnown RBP5.83□□□□□ -1.48
KDM3B-205ENST00000508386 CUL2Q13617 745 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 CUL4AQ13619 759 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 RABEP1Q15276 862 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 C8orf34Q49A92 452 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 ALFQ53S48 1182 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 KRT39Q6A163 491 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 LINGO4Q6UY18 593 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 PARS2Q7L3T8 475 aaKnown RBP5.83□□□□□ -1.48
KDM3B-205ENST00000508386 FAM186BQ8IYM0 893 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 ZNF683Q8IZ20 524 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 Q8N9G6 341 aaPredicted RBP5.83□□□□□ -1.48
KDM3B-205ENST00000508386 GPR156Q8NFN8 814 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 PCDH19Q8TAB3 1148 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 WDR48Q8TAF3 677 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 GRIN3AQ8TCU5 1115 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 GLMNQ92990 594 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 KAT5Q92993 513 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 NAT6Q93015 286 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 PAGE5Q96GU1 130 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 FAXDC2Q96IV6 333 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 GFM1Q96RP9 751 aaKnown RBP5.83□□□□□ -1.48
KDM3B-205ENST00000508386 DDX50Q9BQ39 737 aaKnown RBP5.83□□□□□ -1.48
KDM3B-205ENST00000508386 CPEB1Q9BZB8 566 aaKnown RBP5.83□□□□□ -1.48
KDM3B-205ENST00000508386 ZSCAN16Q9H4T2 348 aaPredicted RBP5.83□□□□□ -1.48
KDM3B-205ENST00000508386 TMPRSS4Q9NRS4 437 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 SIRPGQ9P1W8 387 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 GMPR2Q9P2T1 348 aaKnown RBP5.83□□□□□ -1.48
KDM3B-205ENST00000508386 SPASTQ9UBP0 616 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 APOBEC3BQ9UH17 382 aaKnown RBP5.83□□□□□ -1.48
KDM3B-205ENST00000508386 SERTAD1Q9UHV2 236 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 VPS51Q9UID3 782 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 TUBD1Q9UJT1 453 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 ANAPC2Q9UJX6 822 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 TBC1D30Q9Y2I9 924 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 FRMD4BQ9Y2L6 1034 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 PCDHB11Q9Y5F2 797 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 SNX10Q9Y5X0 201 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 RNF215Q9Y6U7 377 aa5.83□□□□□ -1.48
KDM3B-205ENST00000508386 CCDC168Q8NDH2 2452 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 A1L4Q6 167 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 TCAF2A6NFQ2 919 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 H3BM21 787 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 ZMPSTE24O75844 475 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 CLDN1O95832 211 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 TRUB2O95900 331 aaKnown RBP5.82□□□□□ -1.48
KDM3B-205ENST00000508386 PDGFAP04085 211 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 ANXA6P08133 673 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 JMJD7P0C870 316 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 SETSIPP0DME0 302 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 TRIM21P19474 475 aaKnown RBP5.82□□□□□ -1.48
KDM3B-205ENST00000508386 NR2F2P24468 414 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 BRD2P25440 801 aaKnown RBP5.82□□□□□ -1.48
KDM3B-205ENST00000508386 GTF2H1P32780 548 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 UGT1A3P35503 534 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 EIF4A3P38919 411 aaKnown RBP5.82□□□□□ -1.48
KDM3B-205ENST00000508386 GPD2P43304 727 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 SLC8A3P57103 927 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 B4GALNT1Q00973 533 aa5.82□□□□□ -1.48
KDM3B-205ENST00000508386 AUHQ13825 339 aaKnown RBP5.82□□□□□ -1.48
KDM3B-205ENST00000508386 CNGA2Q16280 664 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms