RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 TGM3Q08188 693 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 INO80DQ53TQ3 878 aaPredicted RBP16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 MIIPQ5JXC2 388 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 MZT2BQ6NZ67 158 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 ADHFE1Q8IWW8 467 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 TMPRSS4Q9NRS4 437 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 RASSF1Q9NS23 344 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 ANKRD6Q9Y2G4 727 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 H0Y858 1186 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 PAPSS1O43252 624 aaPredicted RBP16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 ANXA6P08133 673 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 SPIRE1Q08AE8 756 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 NOL9Q5SY16 702 aaKnown RBP16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 C6orf52Q5T4I8 152 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 FAM183BPQ6ZVS7 135 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 PARGQ86W56 976 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 CLYBLQ8N0X4 340 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 CKAP2Q8WWK9 683 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 SLC25A23Q9BV35 468 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 CHPFQ8IZ52 775 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 VANGL1Q8TAA9 524 aaPredicted RBP16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 ENTPD4Q9Y227 616 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 GSTK1Q9Y2Q3 226 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 TNS3Q68CZ2 1445 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 TSPAN4O14817 238 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 KPNA5O15131 536 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 ALADP13716 330 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 PLA2G4EQ3MJ16 856 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 HYIQ5T013 277 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 RNF220Q5VTB9 566 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 PMF1Q6P1K2 205 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 C7orf57Q8NEG2 295 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 PIGUQ9H490 435 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 C8orf4Q9NR00 106 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 CLN6Q9NWW5 311 aa16.96■□□□□ 0.31
TSPAN3-201ENST00000267970 A0A087X1B8 175 aa16.96■□□□□ 0.3
TSPAN3-201ENST00000267970 AP3D1O14617 1153 aa16.96■□□□□ 0.3
TSPAN3-201ENST00000267970 EGFRP00533 1210 aa16.96■□□□□ 0.3
TSPAN3-201ENST00000267970 SNRPB2P08579 225 aaKnown RBP16.96■□□□□ 0.3
TSPAN3-201ENST00000267970 GK5Q6ZS86 529 aa16.96■□□□□ 0.3
TSPAN3-201ENST00000267970 CLIP4Q8N3C7 705 aa16.96■□□□□ 0.3
TSPAN3-201ENST00000267970 TCAIMQ8N3R3 496 aa16.96■□□□□ 0.3
TSPAN3-201ENST00000267970 BAP1Q92560 729 aa16.96■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM92AA1XBS5 289 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 SNX3O60493 162 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 AUHQ13825 339 aaKnown RBP16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 BROXQ5VW32 411 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 NET1Q7Z628 596 aaPredicted RBP16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 ZNF483Q8TF39 744 aaPredicted RBP16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 EEF1AKMT1Q8WVE0 214 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 TCEA1P23193 301 aaKnown RBP16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 SYTL5Q8TDW5 730 aaPredicted RBP16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 ATG10Q9H0Y0 220 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 SPG21Q9NZD8 308 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 OVOS2A0A0G2JMS6 1433 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 OVOS2A0A0J9YW53 1432 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 OVOS2Q6IE36 1432 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 LRRC14BA6NHZ5 514 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 OR10H3O60404 316 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 RENBPP51606 427 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 SLC6A3Q01959 620 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 ZNF280DQ6N043 979 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 OR6K2Q8NGY2 324 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 KIAA1257Q9ULG3 409 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 EPHB6O15197 1021 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 C9P02748 559 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 SLC5A9Q2M3M2 681 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 KCNK4Q9NYG8 393 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 SLC17A7Q9P2U7 560 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 ITGA11Q9UKX5 1188 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 GLI2P10070 1586 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 CHRNGP07510 517 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 ITGA1P56199 1179 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 BEX3Q00994 111 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 CBX3Q13185 183 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 INSCQ1MX18 579 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 HOMEZQ8IX15 550 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM9CQ8IZT9 166 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 ART5Q96L15 291 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 TUT1Q9H6E5 874 aaKnown RBP16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 NOL11Q9H8H0 719 aaKnown RBP16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 PHF11Q9UIL8 331 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 RAB21Q9UL25 225 aa16.95■□□□□ 0.3
TSPAN3-201ENST00000267970 CLDN5O00501 218 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 BST1Q10588 318 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 ABRAXAS1Q6UWZ7 409 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 DHDDSQ86SQ9 333 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 BUD31P41223 144 aaPredicted RBP16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 IL2P60568 153 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 CDC42P60953 191 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 SLC47A1Q96FL8 570 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 MAFFQ9ULX9 164 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 SHROOM2Q13796 1616 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 H3BRB1 525 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 HGFP14210 728 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 TFEBP19484 476 aa16.94■□□□□ 0.3
TSPAN3-201ENST00000267970 CDH13P55290 713 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms