RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 CCDC78A2IDD5 438 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 PHGDHO43175 533 aaKnown RBP13.94□□□□□ -0.18
NPHP4-207ENST00000470763 POLBP06746 335 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 PSMB4P28070 264 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 AVPR1AP37288 418 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 C6orf10Q5SRN2 563 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 BTLAQ7Z6A9 289 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 EPHX4Q8IUS5 362 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 C17orf50Q8WW18 174 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 SGF29Q96ES7 293 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 MTG1Q9BT17 334 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-207ENST00000470763 EFHD1Q9BUP0 239 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 FAM49BQ9NUQ9 324 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 MORF4L1Q9UBU8 362 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 SLC39A10Q9ULF5 831 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 TANC1Q9C0D5 1861 aa13.94□□□□□ -0.18
NPHP4-207ENST00000470763 MGAMO43451 1857 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 RNF103-CHMP3A0A140T963 221 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 TCRBV3S1A0A5B6 114 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 KRBA1A5PL33 1030 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 TRIM64CA6NLI5 447 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 PAPSS1O43252 624 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-207ENST00000470763 KCNA2P16389 499 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 PROZP22891 400 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 LIMK2P53671 638 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 MLLT10P55197 1068 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 NFATC3Q12968 1075 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 PRKAA1Q13131 559 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 CAPSQ13938 189 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 ZNF667Q5HYK9 610 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 LIPMQ5VYY2 423 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 EEPD1Q7L9B9 569 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 TNIP2Q8NFZ5 429 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 HTR3CQ8WXA8 447 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 PBXIP1Q96AQ6 731 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 UNC93B1Q9H1C4 597 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 GNPTGQ9UJJ9 305 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 ITGB1BP2Q9UKP3 347 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 ERGIC3Q9Y282 383 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 TPD52L2O43399 206 aaKnown RBP13.93□□□□□ -0.18
NPHP4-207ENST00000470763 CNOT3O75175 753 aaKnown RBP13.93□□□□□ -0.18
NPHP4-207ENST00000470763 NR3C2P08235 984 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 HOXC6P09630 235 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 MERTKQ12866 999 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 BAATQ14032 418 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-207ENST00000470763 MFSD4BQ5TF39 518 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 REP15Q6BDI9 236 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 CLEC14AQ86T13 490 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 IGFN1Q86VF2 1251 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 LSMEM2Q8N112 164 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 SPATA6LQ8N4H0 392 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 SCAIQ8N9R8 606 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 RDM1Q8NG50 284 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 QKIQ96PU8 341 aaKnown RBP eCLIP13.93□□□□□ -0.18
NPHP4-207ENST00000470763 TCF12Q99081 682 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 DOK1Q99704 481 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 PDZD7Q9H5P4 517 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 CACNA2D2Q9NY47 1150 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 DTLQ9NZJ0 730 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 DAPK2Q9UIK4 370 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 TRIM24O15164 1050 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 NOL3O60936 208 aaKnown RBP13.93□□□□□ -0.18
NPHP4-207ENST00000470763 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
NPHP4-207ENST00000470763 RGS20O76081 388 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 MATN1P21941 496 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 MYF6P23409 242 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 AP3M2P53677 418 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 NME5P56597 212 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 TNK2Q07912 1038 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 AGKQ53H12 422 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 XKR3Q5GH77 459 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 PERM1Q5SV97 790 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 STRIP1Q5VSL9 837 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 SNRNP48Q6IEG0 339 aaKnown RBP13.93□□□□□ -0.18
NPHP4-207ENST00000470763 C4orf22Q6V702 233 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 TTC30AQ86WT1 665 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 SNX29P2Q8IUI4 249 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 ZNF420Q8TAQ5 688 aaPredicted RBP13.93□□□□□ -0.18
NPHP4-207ENST00000470763 HMGCLL1Q8TB92 370 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 KCNN1Q92952 543 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 WNK4Q96J92 1243 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 ZNF670Q9BS34 389 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 TMEM98Q9Y2Y6 226 aa13.93□□□□□ -0.18
NPHP4-207ENST00000470763 A0A0A0MRY4 1105 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 SLC22A2O15244 555 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 PLA2G6O60733 806 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 SBK3P0C264 359 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 ATP6V1B2P21281 511 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 SDC4P31431 198 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 MAGEA12P43365 314 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 GALNT2Q10471 571 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 PLCL1Q15111 1095 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 BCL2A1Q16548 175 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 USP50Q70EL3 339 aaPredicted RBP13.92□□□□□ -0.18
NPHP4-207ENST00000470763 OR52K1Q8NGK4 314 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 ADAMTS16Q8TE57 1224 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 ITPKCQ96DU7 683 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 SPATA13Q96N96 652 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 OMDQ99983 421 aa13.92□□□□□ -0.18
NPHP4-207ENST00000470763 SPAG4Q9NPE6 437 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms