RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 TTC39BQ5VTQ0 682 aaPredicted RBP14.98□□□□□ -0.01
CXCL12-201ENST00000343575 FYB2Q5VWT5 728 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 CPLX4Q7Z7G2 160 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 SETD3Q86TU7 594 aaPredicted RBP14.98□□□□□ -0.01
CXCL12-201ENST00000343575 TMEM25Q86YD3 366 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 HJURPQ8NCD3 748 aaPredicted RBP14.98□□□□□ -0.01
CXCL12-201ENST00000343575 ST13P5Q8NFI4 369 aaPredicted RBP14.98□□□□□ -0.01
CXCL12-201ENST00000343575 MAML1Q92585 1016 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 ALG14Q96F25 216 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 MSLNLQ96KJ4 702 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 TEKT5Q96M29 485 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 FMO2Q99518 471 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 CENPHQ9H3R5 247 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 PDFQ9HBH1 243 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 RAB6BQ9NRW1 208 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 OR51B4Q9Y5P0 310 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 UNC80Q8N2C7 3258 aa14.98□□□□□ -0.01
CXCL12-201ENST00000343575 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 ILVBLA1L0T0 632 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 CFAP73A6NFT4 308 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 ARHGAP42A6NI28 874 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 OPHN1O60890 802 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 GLDCP23378 1020 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 FCARP24071 287 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 MAGEA6P43360 314 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 IFI35P80217 286 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 ZNF177Q13360 481 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 ITIH4Q14624 930 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 UAP1Q16222 522 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 UBAP2Q5T6F2 1119 aaKnown RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 GET4Q7L5D6 327 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 ADGRG2Q8IZP9 1017 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 CCT6BQ92526 530 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 N4BP2L2Q92802 583 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 FATE1Q969F0 183 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 MIEF2Q96C03 454 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 CHMP6Q96FZ7 201 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 FAM129AQ9BZQ8 928 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 MAGEH1Q9H213 219 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 BATF3Q9NR55 127 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 ACTL7AQ9Y615 435 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 F5H423 210 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 MTSS1O43312 755 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 LUC7L3O95232 432 aaKnown RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 BASP1P80723 227 aaKnown RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 SLC10A7Q0GE19 358 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 MORF4L2Q15014 288 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 MPP7Q5T2T1 576 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 PID1Q7Z2X4 250 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 TMC3Q7Z5M5 1100 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 PPIL6Q8IXY8 311 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 CELF5Q8N6W0 485 aaKnown RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 CCDC197Q8NCU1 140 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 BBOF1Q8ND07 529 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 USP33Q8TEY7 942 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 ASIC4Q96FT7 647 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 LMLNQ96KR4 655 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 FAM161BQ96MY7 647 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 AGAP3Q96P47 875 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 ACE2Q9BYF1 805 aaPredicted RBP14.97□□□□□ -0.01
CXCL12-201ENST00000343575 CLDND1Q9NY35 253 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 IGSF9Q9P2J2 1179 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 SHOC2Q9UQ13 582 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 WNT6Q9Y6F9 365 aa14.97□□□□□ -0.01
CXCL12-201ENST00000343575 CACNG3O60359 315 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 PRAMEF11O60813 436 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 PENKP01210 267 aaPredicted RBP14.96□□□□□ -0.01
CXCL12-201ENST00000343575 PSMB4P28070 264 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 MZF1P28698 734 aaPredicted RBP14.96□□□□□ -0.01
CXCL12-201ENST00000343575 CAV1Q03135 178 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 SEMA5AQ13591 1074 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 MPPE1Q53F39 396 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 C6orf118Q5T5N4 469 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 ARHGEF18Q6ZSZ5 1173 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 CARNMT1Q8N4J0 409 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 DDI1Q8WTU0 396 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 SMARCD2Q92925 531 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 TLCD1Q96CP7 247 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 MYADMQ96S97 322 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 VAT1Q99536 393 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 TRPV4Q9HBA0 871 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 GDE1Q9NZC3 331 aa14.96□□□□□ -0.01
CXCL12-201ENST00000343575 GOLGA8MH3BSY2 632 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 CHADO15335 359 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 PPFIA2O75334 1257 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 CD160O95971 181 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 RHOCP08134 193 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 DRD4P21917 467 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 IL10RBQ08334 325 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 HNRNPDQ14103 355 aaKnown RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 IHHQ14623 411 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 PARP6Q2NL67 630 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 ATAT1Q5SQI0 421 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 RNF219Q5W0B1 726 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 C4orf22Q6V702 233 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 ZNF534Q76KX8 674 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 ZCCHC9Q8N567 271 aaKnown RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 TEX26Q8N6G2 289 aa14.95□□□□□ -0.02
CXCL12-201ENST00000343575 UBLCP1Q8WVY7 318 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-201ENST00000343575 FEM1AQ9BSK4 669 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms