RNA–Protein interactions for RNA: tC(GCA)B

tC(GCA)B, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)B, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)BtC(GCA)B NPL4P33755 580 aa4.28□□□□□ -1.72
tC(GCA)BtC(GCA)B VAB2P40003 282 aa4.28□□□□□ -1.72
tC(GCA)BtC(GCA)B PUS6P53294 404 aa4.28□□□□□ -1.72
tC(GCA)BtC(GCA)B YNL115CP53925 644 aa4.28□□□□□ -1.72
tC(GCA)BtC(GCA)B DUS4Q06063 367 aa4.28□□□□□ -1.72
tC(GCA)BtC(GCA)B UGA3P26370 528 aa4.27□□□□□ -1.73
tC(GCA)BtC(GCA)B SKP2P42843 763 aa4.27□□□□□ -1.73
tC(GCA)BtC(GCA)B PPZ1P26570 692 aa4.26□□□□□ -1.73
tC(GCA)BtC(GCA)B URK1P27515 501 aa4.26□□□□□ -1.73
tC(GCA)BtC(GCA)B YBL028CP38202 106 aa4.26□□□□□ -1.73
tC(GCA)BtC(GCA)B NOC2P39744 710 aaKnown RBP4.26□□□□□ -1.73
tC(GCA)BtC(GCA)B FMP10P40098 244 aa4.26□□□□□ -1.73
tC(GCA)BtC(GCA)B INP52P50942 1183 aa4.26□□□□□ -1.73
tC(GCA)BtC(GCA)B AAD16Q02895 342 aa4.26□□□□□ -1.73
tC(GCA)BtC(GCA)B EMI2Q04409 500 aaKnown RBP4.26□□□□□ -1.73
tC(GCA)BtC(GCA)B YLR271WQ06152 274 aa4.26□□□□□ -1.73
tC(GCA)BtC(GCA)B RAD59Q12223 238 aa4.26□□□□□ -1.73
tC(GCA)BtC(GCA)B BEM2P39960 2167 aaKnown RBP4.26□□□□□ -1.73
tC(GCA)BtC(GCA)B HEM1P09950 548 aaPredicted RBP4.25□□□□□ -1.73
tC(GCA)BtC(GCA)B DIT2P21595 489 aa4.25□□□□□ -1.73
tC(GCA)BtC(GCA)B PKC1P24583 1151 aa4.25□□□□□ -1.73
tC(GCA)BtC(GCA)B POT1P27796 417 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
tC(GCA)BtC(GCA)B CCH1P50077 2039 aa4.25□□□□□ -1.73
tC(GCA)BtC(GCA)B RMD1Q03441 430 aa4.25□□□□□ -1.73
tC(GCA)BtC(GCA)B UBX5Q06682 500 aa4.25□□□□□ -1.73
tC(GCA)BtC(GCA)B UTP20P35194 2493 aaKnown RBP4.24□□□□□ -1.73
tC(GCA)BtC(GCA)B DUR1,2P32528 1835 aaKnown RBP4.24□□□□□ -1.73
tC(GCA)BtC(GCA)B KRS1P15180 591 aaKnown RBP4.24□□□□□ -1.73
tC(GCA)BtC(GCA)B SRP40P32583 406 aaPredicted RBP4.24□□□□□ -1.73
tC(GCA)BtC(GCA)B RGT1P32862 1170 aa4.24□□□□□ -1.73
tC(GCA)BtC(GCA)B HXT5P38695 592 aa4.24□□□□□ -1.73
tC(GCA)BtC(GCA)B FAP1P53971 965 aa4.24□□□□□ -1.73
tC(GCA)BtC(GCA)B SRC1Q03707 834 aa4.24□□□□□ -1.73
tC(GCA)BtC(GCA)B BUL2Q03758 920 aaKnown RBP4.24□□□□□ -1.73
tC(GCA)BtC(GCA)B NSE3Q05541 303 aa4.24□□□□□ -1.73
tC(GCA)BtC(GCA)B PHR1P05066 565 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
tC(GCA)BtC(GCA)B KEX2P13134 814 aa4.23□□□□□ -1.73
tC(GCA)BtC(GCA)B VMA2P16140 517 aaKnown RBP4.23□□□□□ -1.73
tC(GCA)BtC(GCA)B PTC4P38089 393 aa4.23□□□□□ -1.73
tC(GCA)BtC(GCA)B RTR1P40084 226 aaPredicted RBP4.23□□□□□ -1.73
tC(GCA)BtC(GCA)B SCS3P53012 380 aa4.23□□□□□ -1.73
tC(GCA)BtC(GCA)B VPS72Q03388 795 aa4.23□□□□□ -1.73
tC(GCA)BtC(GCA)B IRC10Q08118 586 aa4.23□□□□□ -1.73
tC(GCA)BtC(GCA)B SUP35P05453 685 aaKnown RBP4.22□□□□□ -1.73
tC(GCA)BtC(GCA)B PDC1P06169 563 aaKnown RBP4.22□□□□□ -1.73
tC(GCA)BtC(GCA)B YFH7P43591 353 aa4.22□□□□□ -1.73
tC(GCA)BtC(GCA)B SGM1P47166 707 aa4.22□□□□□ -1.73
tC(GCA)BtC(GCA)B NSG2P53898 299 aa4.22□□□□□ -1.73
tC(GCA)BtC(GCA)B YNL034WP53963 612 aa4.22□□□□□ -1.73
tC(GCA)BtC(GCA)B YNL018CP53976 612 aa4.22□□□□□ -1.73
tC(GCA)BtC(GCA)B MYO1P08964 1928 aa4.21□□□□□ -1.74
tC(GCA)BtC(GCA)B SPT2P06843 333 aaPredicted RBP4.21□□□□□ -1.74
tC(GCA)BtC(GCA)B YBR287WP38355 427 aa4.21□□□□□ -1.74
tC(GCA)BtC(GCA)B HUL4P40985 892 aa4.21□□□□□ -1.74
tC(GCA)BtC(GCA)B DAK1P54838 584 aaKnown RBP4.21□□□□□ -1.74
tC(GCA)BtC(GCA)B PIN2Q12057 282 aa4.21□□□□□ -1.74
tC(GCA)BtC(GCA)B COQ4O13525 335 aa4.2□□□□□ -1.74
tC(GCA)BtC(GCA)B IDI1P15496 288 aa4.2□□□□□ -1.74
tC(GCA)BtC(GCA)B SPB4P25808 606 aaPredicted RBP4.2□□□□□ -1.74
tC(GCA)BtC(GCA)B APL6P46682 809 aa4.2□□□□□ -1.74
tC(GCA)BtC(GCA)B LCD1Q04377 747 aa4.2□□□□□ -1.74
tC(GCA)BtC(GCA)B PRP8P33334 2413 aaKnown RBP4.2□□□□□ -1.74
tC(GCA)BtC(GCA)B CSF1Q12150 2958 aa4.19□□□□□ -1.74
tC(GCA)BtC(GCA)B YUR1P26725 428 aa4.19□□□□□ -1.74
tC(GCA)BtC(GCA)B SLA1P32790 1244 aa4.19□□□□□ -1.74
tC(GCA)BtC(GCA)B ITC1P53125 1264 aa4.19□□□□□ -1.74
tC(GCA)BtC(GCA)B BIO5P53744 561 aaKnown RBP4.19□□□□□ -1.74
tC(GCA)BtC(GCA)B YML037CQ03703 340 aa4.19□□□□□ -1.74
tC(GCA)BtC(GCA)B YRR1Q12172 810 aa4.19□□□□□ -1.74
tC(GCA)BtC(GCA)B RTP1Q12751 981 aa4.19□□□□□ -1.74
tC(GCA)BtC(GCA)B MOT1P32333 1867 aa4.18□□□□□ -1.74
tC(GCA)BtC(GCA)B SNF3P10870 884 aa4.18□□□□□ -1.74
tC(GCA)BtC(GCA)B PER1P25625 357 aa4.18□□□□□ -1.74
tC(GCA)BtC(GCA)B BRL1P38770 471 aa4.18□□□□□ -1.74
tC(GCA)BtC(GCA)B INP51P40559 946 aaKnown RBP4.18□□□□□ -1.74
tC(GCA)BtC(GCA)B HXT10P43581 546 aa4.18□□□□□ -1.74
tC(GCA)BtC(GCA)B YGL039WP53183 348 aaKnown RBP4.18□□□□□ -1.74
tC(GCA)BtC(GCA)B NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
tC(GCA)BtC(GCA)B YDL124WQ07551 312 aaKnown RBP4.18□□□□□ -1.74
tC(GCA)BtC(GCA)B PSF3Q12146 194 aa4.18□□□□□ -1.74
tC(GCA)BtC(GCA)B PSH1Q12161 406 aa4.18□□□□□ -1.74
tC(GCA)BtC(GCA)B KIN1P13185 1064 aa4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B UTR4P32626 227 aa4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B HAL5P38970 855 aaKnown RBP4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B GPB2P39717 880 aa4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B YIR042CP40586 236 aa4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B HEH2Q03281 663 aa4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B ECM16Q04217 1267 aaKnown RBP4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B SUB2Q07478 446 aaKnown RBP4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B MSC6Q08818 692 aaKnown RBP4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B LAP2Q10740 671 aa4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B FKS1P38631 1876 aaKnown RBP4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B SAC3P46674 1301 aa4.17□□□□□ -1.74
tC(GCA)BtC(GCA)B TRP2P00899 507 aaKnown RBP4.16□□□□□ -1.74
tC(GCA)BtC(GCA)B TRK1P12685 1235 aa4.16□□□□□ -1.74
tC(GCA)BtC(GCA)B POX1P13711 748 aa4.16□□□□□ -1.74
tC(GCA)BtC(GCA)B IMG2P25642 146 aaPredicted RBP4.16□□□□□ -1.74
tC(GCA)BtC(GCA)B MDL2P33311 773 aa4.16□□□□□ -1.74
tC(GCA)BtC(GCA)B PTK1P36002 662 aaPredicted RBP4.16□□□□□ -1.74
tC(GCA)BtC(GCA)B FAF1P40546 346 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 71.6 ms