RNA–Protein interactions for RNA: YPR072W

NOT5, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeast

Gene NOT5, Length 1,683 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOT5	YPR072W	SOG2	Q08817	791 aa		4.21	□□□□□ -1.74
NOT5	YPR072W	CWC15	Q03772	175 aa	Known RBP	4.2	□□□□□ -1.74
NOT5	YPR072W	FUS1	P11710	512 aa		4.19	□□□□□ -1.74
NOT5	YPR072W	HXT8	P40886	569 aa		4.19	□□□□□ -1.74
NOT5	YPR072W	RGD2	P43556	714 aa		4.19	□□□□□ -1.74
NOT5	YPR072W	GUP1	P53154	560 aa		4.19	□□□□□ -1.74
NOT5	YPR072W	YML083C	Q04526	418 aa		4.19	□□□□□ -1.74
NOT5	YPR072W	BRE4	Q07660	1125 aa		4.19	□□□□□ -1.74
NOT5	YPR072W	AIM46	P38885	310 aa		4.19	□□□□□ -1.74
NOT5	YPR072W	LEM3	P42838	414 aa		4.19	□□□□□ -1.74
NOT5	YPR072W	MAG2	Q06436	670 aa	Known RBP	4.19	□□□□□ -1.74
NOT5	YPR072W	BOI1	P38041	980 aa	Known RBP	4.18	□□□□□ -1.74
NOT5	YPR072W	POL5	P39985	1022 aa	Known RBP	4.18	□□□□□ -1.74
NOT5	YPR072W	FIR1	P40020	876 aa		4.18	□□□□□ -1.74
NOT5	YPR072W	SPO74	P45819	413 aa		4.18	□□□□□ -1.74
NOT5	YPR072W	APC11	Q12157	165 aa		4.18	□□□□□ -1.74
NOT5	YPR072W	YBR287W	P38355	427 aa		4.17	□□□□□ -1.74
NOT5	YPR072W	NCE103	P53615	221 aa		4.17	□□□□□ -1.74
NOT5	YPR072W	CYC7	P00045	113 aa		4.16	□□□□□ -1.74
NOT5	YPR072W	AOS1	Q06624	347 aa		4.16	□□□□□ -1.74
NOT5	YPR072W	NOB1	Q08444	459 aa	Known RBP	4.16	□□□□□ -1.74
NOT5	YPR072W	RPB10	P22139	70 aa		4.16	□□□□□ -1.74
NOT5	YPR072W	ELM1	P32801	640 aa		4.16	□□□□□ -1.74
NOT5	YPR072W	MAE1	P36013	669 aa	Known RBP	4.16	□□□□□ -1.74
NOT5	YPR072W	NTA1	P40354	457 aa		4.16	□□□□□ -1.74
NOT5	YPR072W	SUT1	P53032	299 aa	Known RBP	4.16	□□□□□ -1.74
NOT5	YPR072W	PNP1	Q05788	311 aa		4.16	□□□□□ -1.74
NOT5	YPR072W	ELG1	Q12050	791 aa		4.16	□□□□□ -1.74
NOT5	YPR072W	HVG1	P0CE11	249 aa		4.15	□□□□□ -1.75
NOT5	YPR072W	ERS1	P17261	260 aa		4.15	□□□□□ -1.75
NOT5	YPR072W	SPO71	Q03868	1245 aa		4.15	□□□□□ -1.75
NOT5	YPR072W	TIF6	Q12522	245 aa	Known RBP	4.15	□□□□□ -1.75
NOT5	YPR072W	YJR124C	P47159	448 aa		4.14	□□□□□ -1.75
NOT5	YPR072W	YNR065C	P53751	1116 aa		4.14	□□□□□ -1.75
NOT5	YPR072W	MSB1	P21339	1137 aa	Known RBP	4.13	□□□□□ -1.75
NOT5	YPR072W	SSA4	P22202	642 aa	Known RBP	4.13	□□□□□ -1.75
NOT5	YPR072W	RRN6	P32786	894 aa		4.13	□□□□□ -1.75
NOT5	YPR072W	SEA4	P38164	1038 aa		4.13	□□□□□ -1.75
NOT5	YPR072W	RAD55	P38953	406 aa		4.13	□□□□□ -1.75
NOT5	YPR072W	NEO1	P40527	1151 aa		4.13	□□□□□ -1.75
NOT5	YPR072W	HAS1	Q03532	505 aa	Known RBP	4.13	□□□□□ -1.75
NOT5	YPR072W	KIP3	P53086	805 aa	Known RBP	4.13	□□□□□ -1.75
NOT5	YPR072W	GLO4	Q12320	285 aa		4.13	□□□□□ -1.75
NOT5	YPR072W	PSY2	P40164	858 aa		4.12	□□□□□ -1.75
NOT5	YPR072W	LSO1	Q3E827	93 aa		4.12	□□□□□ -1.75
NOT5	YPR072W	PYC2	P32327	1180 aa	Known RBP	4.11	□□□□□ -1.75
NOT5	YPR072W	IRS4	P36115	615 aa	Known RBP	4.11	□□□□□ -1.75
NOT5	YPR072W	SDH1	Q00711	640 aa		4.11	□□□□□ -1.75
NOT5	YPR072W	SMC1	P32908	1225 aa		4.1	□□□□□ -1.75
NOT5	YPR072W	GIC2	Q06648	383 aa		4.1	□□□□□ -1.75
NOT5	YPR072W	GCD1	P09032	578 aa	Predicted RBP	4.1	□□□□□ -1.75
NOT5	YPR072W	BOL3	P39724	118 aa		4.1	□□□□□ -1.75
NOT5	YPR072W	FET4	P40988	552 aa		4.1	□□□□□ -1.75
NOT5	YPR072W	RNQ1	P25367	405 aa		4.08	□□□□□ -1.76
NOT5	YPR072W	LRG1	P35688	1017 aa		4.08	□□□□□ -1.76
NOT5	YPR072W	FAR11	P53917	953 aa		4.08	□□□□□ -1.76
NOT5	YPR072W	CTR9	P89105	1077 aa		4.07	□□□□□ -1.76
NOT5	YPR072W	FUR4	P05316	633 aa	Known RBP	4.06	□□□□□ -1.76
NOT5	YPR072W	YOR223W	Q12015	292 aa		4.06	□□□□□ -1.76
NOT5	YPR072W	COB	P00163	385 aa		4.06	□□□□□ -1.76
NOT5	YPR072W	SEG2	P34250	1132 aa		4.06	□□□□□ -1.76
NOT5	YPR072W	WHI3	P34761	661 aa	Known RBP	4.05	□□□□□ -1.76
NOT5	YPR072W	GPT2	P36148	743 aa		4.05	□□□□□ -1.76
NOT5	YPR072W	POL12	P38121	705 aa	Predicted RBP	4.05	□□□□□ -1.76
NOT5	YPR072W	UBP5	P39944	805 aa		4.05	□□□□□ -1.76
NOT5	YPR072W	MMM1	P41800	426 aa		4.05	□□□□□ -1.76
NOT5	YPR072W	YMR074C	Q04773	145 aa		4.05	□□□□□ -1.76
NOT5	YPR072W	CIT3	P43635	486 aa		4.03	□□□□□ -1.76
NOT5	YPR072W	YIG1	Q08956	461 aa		4.03	□□□□□ -1.76
NOT5	YPR072W	DFG16	Q99234	619 aa		4.03	□□□□□ -1.76
NOT5	YPR072W	RIM11	P38615	370 aa		4.03	□□□□□ -1.76
NOT5	YPR072W	NIT1	P40447	199 aa		4.03	□□□□□ -1.76
NOT5	YPR072W	GCV1	P48015	400 aa		4.03	□□□□□ -1.76
NOT5	YPR072W	ECL1	P48235	211 aa		4.03	□□□□□ -1.76
NOT5	YPR072W	DOT1	Q04089	582 aa	Known RBP	4.03	□□□□□ -1.76
NOT5	YPR072W	CMR1	Q12510	522 aa	Known RBP	4.03	□□□□□ -1.76
NOT5	YPR072W	DUR3	P33413	735 aa		4.02	□□□□□ -1.77
NOT5	YPR072W	NPR1	P22211	790 aa		4.01	□□□□□ -1.77
NOT5	YPR072W	OYE3	P41816	400 aa	Predicted RBP	4.01	□□□□□ -1.77
NOT5	YPR072W	RCM1	P53972	490 aa		4.01	□□□□□ -1.77
NOT5	YPR072W	RSC4	Q02206	625 aa		4.01	□□□□□ -1.77
NOT5	YPR072W	YLL054C	Q12244	843 aa		4.01	□□□□□ -1.77
NOT5	YPR072W	HTS1	P07263	546 aa	Known RBP	4	□□□□□ -1.77
NOT5	YPR072W	SUB2	Q07478	446 aa	Known RBP	4	□□□□□ -1.77
NOT5	YPR072W	NSI1	Q12457	570 aa		4	□□□□□ -1.77
NOT5	YPR072W	PRP5	P21372	849 aa	Predicted RBP	4	□□□□□ -1.77
NOT5	YPR072W	HSP78	P33416	811 aa		4	□□□□□ -1.77
NOT5	YPR072W	YHL008C	P38750	627 aa		4	□□□□□ -1.77
NOT5	YPR072W	UFD2	P54860	961 aa		4	□□□□□ -1.77
NOT5	YPR072W	YOR059C	Q08448	450 aa	Known RBP	4	□□□□□ -1.77
NOT5	YPR072W	GAS1	P22146	559 aa	Known RBP	3.99	□□□□□ -1.77
NOT5	YPR072W	GLO3	P38682	493 aa	Known RBP	3.99	□□□□□ -1.77
NOT5	YPR072W	QDR1	P40475	563 aa		3.99	□□□□□ -1.77
NOT5	YPR072W	MSH6	Q03834	1242 aa		3.99	□□□□□ -1.77
NOT5	YPR072W	RPS4A	P0CX35	261 aa	Known RBP	3.98	□□□□□ -1.77
NOT5	YPR072W	RPS4B	P0CX36	261 aa	Known RBP	3.98	□□□□□ -1.77
NOT5	YPR072W	TSA1	P34760	196 aa	Known RBP	3.98	□□□□□ -1.77
NOT5	YPR072W	MSH4	P40965	878 aa	Predicted RBP	3.98	□□□□□ -1.77
NOT5	YPR072W	ALT1	P52893	592 aa		3.98	□□□□□ -1.77
NOT5	YPR072W	PRP43	P53131	767 aa	Known RBP	3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms