RNA–Protein interactions for RNA: YOR341W

RPA190, Transcript of RNA polymerase I largest subunit A190, yeastyeast

Gene RPA190, Length 4,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA190YOR341W MNL2Q12205 849 aa3.55□□□□□ -1.84
RPA190YOR341W SMY1P32364 656 aaKnown RBP3.55□□□□□ -1.84
RPA190YOR341W RGT1P32862 1170 aa3.55□□□□□ -1.84
RPA190YOR341W YGR117CP53270 476 aa3.55□□□□□ -1.84
RPA190YOR341W YDL144CQ07589 356 aa3.55□□□□□ -1.84
RPA190YOR341W YFH7P43591 353 aa3.54□□□□□ -1.84
RPA190YOR341W CTH1P47976 325 aa3.54□□□□□ -1.84
RPA190YOR341W LIF1P53150 421 aa3.54□□□□□ -1.84
RPA190YOR341W SPO71Q03868 1245 aa3.54□□□□□ -1.84
RPA190YOR341W NAB3P38996 802 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
RPA190YOR341W VPS8P39702 1274 aa3.54□□□□□ -1.84
RPA190YOR341W SPO1P53541 631 aa3.54□□□□□ -1.84
RPA190YOR341W GSM1P42950 618 aa3.54□□□□□ -1.84
RPA190YOR341W HEH2Q03281 663 aa3.54□□□□□ -1.84
RPA190YOR341W MMR1Q06324 491 aa3.54□□□□□ -1.84
RPA190YOR341W SWI6P09959 803 aa3.53□□□□□ -1.84
RPA190YOR341W ACA1P39970 489 aa3.53□□□□□ -1.84
RPA190YOR341W HMF1P40037 129 aaKnown RBP3.53□□□□□ -1.84
RPA190YOR341W RSC8P43609 557 aaKnown RBP3.53□□□□□ -1.84
RPA190YOR341W SYN8P31377 255 aa3.53□□□□□ -1.84
RPA190YOR341W TAF10Q12030 206 aa3.53□□□□□ -1.84
RPA190YOR341W RVB2Q12464 471 aaKnown RBP3.53□□□□□ -1.84
RPA190YOR341W HVG1P0CE11 249 aa3.53□□□□□ -1.84
RPA190YOR341W FMO1P38866 432 aa3.53□□□□□ -1.84
RPA190YOR341W VPS62P53285 467 aa3.53□□□□□ -1.84
RPA190YOR341W HIF1Q12373 385 aa3.53□□□□□ -1.84
RPA190YOR341W SPT21P35209 758 aa3.52□□□□□ -1.85
RPA190YOR341W FPR4Q06205 392 aaPredicted RBP3.52□□□□□ -1.85
RPA190YOR341W RRP5Q05022 1729 aaKnown RBP3.52□□□□□ -1.85
RPA190YOR341W YNG2P38806 282 aaKnown RBP3.52□□□□□ -1.85
RPA190YOR341W YGR125WP53273 1036 aa3.52□□□□□ -1.85
RPA190YOR341W MSC6Q08818 692 aaKnown RBP3.52□□□□□ -1.85
RPA190YOR341W DIT2P21595 489 aa3.52□□□□□ -1.85
RPA190YOR341W ALD5P40047 520 aaKnown RBP3.52□□□□□ -1.85
RPA190YOR341W SAC3P46674 1301 aa3.52□□□□□ -1.85
RPA190YOR341W ADP1P25371 1049 aa3.52□□□□□ -1.85
RPA190YOR341W SMC1P32908 1225 aa3.52□□□□□ -1.85
RPA190YOR341W FYV10P40492 516 aa3.52□□□□□ -1.85
RPA190YOR341W SMC3P47037 1230 aa3.52□□□□□ -1.85
RPA190YOR341W RSM26P47141 266 aa3.52□□□□□ -1.85
RPA190YOR341W HIM1Q06674 414 aa3.52□□□□□ -1.85
RPA190YOR341W MCM4P30665 933 aaKnown RBP3.51□□□□□ -1.85
RPA190YOR341W YJL007CP47080 104 aa3.51□□□□□ -1.85
RPA190YOR341W RPT4P53549 437 aaKnown RBP3.51□□□□□ -1.85
RPA190YOR341W RTC4P53850 401 aa3.51□□□□□ -1.85
RPA190YOR341W DIP2Q12220 943 aaPredicted RBP3.51□□□□□ -1.85
RPA190YOR341W FUB1P25659 250 aa3.51□□□□□ -1.85
RPA190YOR341W SRP40P32583 406 aaPredicted RBP3.51□□□□□ -1.85
RPA190YOR341W AAP1P37898 856 aaKnown RBP3.51□□□□□ -1.85
RPA190YOR341W ICP55P40051 511 aa3.51□□□□□ -1.85
RPA190YOR341W SPO74P45819 413 aa3.51□□□□□ -1.85
RPA190YOR341W IRC8P47046 822 aa3.51□□□□□ -1.85
RPA190YOR341W THI3Q07471 609 aa3.51□□□□□ -1.85
RPA190YOR341W MGM1P32266 881 aa3.51□□□□□ -1.85
RPA190YOR341W THI22Q06490 572 aa3.51□□□□□ -1.85
RPA190YOR341W YDL124WQ07551 312 aaKnown RBP3.51□□□□□ -1.85
RPA190YOR341W HXT5P38695 592 aa3.51□□□□□ -1.85
RPA190YOR341W ITC1P53125 1264 aa3.51□□□□□ -1.85
RPA190YOR341W YDL129WQ07555 291 aa3.51□□□□□ -1.85
RPA190YOR341W RKM4Q12504 494 aa3.51□□□□□ -1.85
RPA190YOR341W ARG82P07250 355 aa3.5□□□□□ -1.85
RPA190YOR341W KRE2P27809 442 aa3.5□□□□□ -1.85
RPA190YOR341W FAA4P47912 694 aaKnown RBP3.5□□□□□ -1.85
RPA190YOR341W KEL3Q08979 651 aaPredicted RBP3.5□□□□□ -1.85
RPA190YOR341W EUG1P32474 517 aa3.5□□□□□ -1.85
RPA190YOR341W OSW2Q12202 724 aa3.5□□□□□ -1.85
RPA190YOR341W DLD1P32891 587 aa3.5□□□□□ -1.85
RPA190YOR341W ASH1P34233 588 aa3.5□□□□□ -1.85
RPA190YOR341W PSP2P50109 593 aaKnown RBP3.5□□□□□ -1.85
RPA190YOR341W FAR11P53917 953 aa3.5□□□□□ -1.85
RPA190YOR341W SMC5Q08204 1093 aa3.5□□□□□ -1.85
RPA190YOR341W PRD1P25375 712 aa3.5□□□□□ -1.85
RPA190YOR341W ATG19P35193 415 aa3.5□□□□□ -1.85
RPA190YOR341W IMP4P53941 290 aaKnown RBP3.5□□□□□ -1.85
RPA190YOR341W RPL8AP17076 256 aaKnown RBP3.49□□□□□ -1.85
RPA190YOR341W COQ8P27697 501 aa3.49□□□□□ -1.85
RPA190YOR341W TFC4P33339 1025 aa3.49□□□□□ -1.85
RPA190YOR341W ZPR1P53303 486 aaKnown RBP3.49□□□□□ -1.85
RPA190YOR341W COQ4O13525 335 aa3.49□□□□□ -1.85
RPA190YOR341W VAS1P07806 1104 aaKnown RBP3.49□□□□□ -1.85
RPA190YOR341W SKG6P32900 734 aaPredicted RBP3.49□□□□□ -1.85
RPA190YOR341W FIR1P40020 876 aa3.49□□□□□ -1.85
RPA190YOR341W SHQ1P40486 507 aaPredicted RBP3.49□□□□□ -1.85
RPA190YOR341W YNR014WP53719 212 aa3.49□□□□□ -1.85
RPA190YOR341W WRS1Q12109 432 aaKnown RBP3.49□□□□□ -1.85
RPA190YOR341W RTS1P38903 757 aa3.49□□□□□ -1.85
RPA190YOR341W EPS1P40557 701 aa3.49□□□□□ -1.85
RPA190YOR341W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85 RIP-Chip
RPA190YOR341W GAS5Q08193 484 aa3.49□□□□□ -1.85
RPA190YOR341W MPC54Q08550 464 aa3.49□□□□□ -1.85
RPA190YOR341W POM152P39685 1337 aa3.48□□□□□ -1.85
RPA190YOR341W ASF1P32447 279 aa3.48□□□□□ -1.85
RPA190YOR341W APN2P38207 520 aa3.48□□□□□ -1.85
RPA190YOR341W JJJ3P47138 172 aa3.48□□□□□ -1.85
RPA190YOR341W ARP5P53946 755 aa3.48□□□□□ -1.85
RPA190YOR341W YPL034WQ03083 165 aa3.48□□□□□ -1.85
RPA190YOR341W YLH47Q06493 454 aa3.48□□□□□ -1.85
RPA190YOR341W ETT1Q08421 412 aaKnown RBP3.48□□□□□ -1.85
RPA190YOR341W OSH2Q12451 1283 aa3.48□□□□□ -1.85
RPA190YOR341W RAD26P40352 1085 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms