RNA–Protein interactions for RNA: YOL048C

RRT8, Transcript of Protein involved in spore wall assembly, yeastyeast

Gene RRT8, Length 1,029 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT8YOL048C SPO22P40511 975 aa10.21□□□□□ -0.77
RRT8YOL048C VID28P40547 921 aa10.21□□□□□ -0.77
RRT8YOL048C MRD1Q06106 887 aaKnown RBP10.21□□□□□ -0.77
RRT8YOL048C PPM2Q08282 695 aa10.21□□□□□ -0.77
RRT8YOL048C MSM1P22438 575 aa10.2□□□□□ -0.78
RRT8YOL048C SKI2P35207 1287 aaKnown RBP RIP-Chip data10.2□□□□□ -0.78not detected
RRT8YOL048C APL6P46682 809 aa10.2□□□□□ -0.78
RRT8YOL048C YGL081WP53156 320 aa10.2□□□□□ -0.78
RRT8YOL048C VPS20Q04272 221 aa10.2□□□□□ -0.78
RRT8YOL048C PEP3P27801 918 aa10.19□□□□□ -0.78
RRT8YOL048C VPS24P36095 224 aaKnown RBP10.19□□□□□ -0.78
RRT8YOL048C DJP1P40564 432 aa10.19□□□□□ -0.78
RRT8YOL048C ENT3P47160 408 aa10.19□□□□□ -0.78
RRT8YOL048C SPN1Q06505 410 aaPredicted RBP10.19□□□□□ -0.78
RRT8YOL048C SNF3P10870 884 aa10.18□□□□□ -0.78
RRT8YOL048C SLI15P38283 698 aa10.18□□□□□ -0.78
RRT8YOL048C UFD2P54860 961 aa10.18□□□□□ -0.78
RRT8YOL048C TRM44Q02648 567 aaKnown RBP10.18□□□□□ -0.78
RRT8YOL048C ATG20Q07528 640 aa10.18□□□□□ -0.78
RRT8YOL048C ACK1Q07622 623 aaPredicted RBP10.18□□□□□ -0.78
RRT8YOL048C CHO2P05374 869 aaKnown RBP10.17□□□□□ -0.78
RRT8YOL048C RPS9BP05755 195 aaKnown RBP10.17□□□□□ -0.78
RRT8YOL048C NPA3P47122 385 aa10.17□□□□□ -0.78
RRT8YOL048C CRF1Q04930 467 aa10.17□□□□□ -0.78
RRT8YOL048C RPL19AP0CX82 189 aaKnown RBP10.16□□□□□ -0.78
RRT8YOL048C RPL19BP0CX83 189 aaPredicted RBP10.16□□□□□ -0.78
RRT8YOL048C RER2P35196 286 aa10.16□□□□□ -0.78
RRT8YOL048C CRG1P38892 291 aaRIP-Chip data10.16□□□□□ -0.78not detected
RRT8YOL048C RTS1P38903 757 aa10.16□□□□□ -0.78
RRT8YOL048C RPS15Q01855 142 aaKnown RBP10.16□□□□□ -0.78
RRT8YOL048C YPL260WQ08977 551 aa10.16□□□□□ -0.78
RRT8YOL048C BIK1P11709 440 aa10.15□□□□□ -0.78
RRT8YOL048C CTF18P49956 741 aa10.15□□□□□ -0.78
RRT8YOL048C YKE2P52553 114 aa10.15□□□□□ -0.78
RRT8YOL048C VPS4P52917 437 aa10.15□□□□□ -0.78
RRT8YOL048C NSG2P53898 299 aa10.15□□□□□ -0.78
RRT8YOL048C EST2Q06163 884 aa10.15□□□□□ -0.78
RRT8YOL048C AIM7Q12156 149 aa10.15□□□□□ -0.78
RRT8YOL048C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.15□□□□□ -0.78not detected
RRT8YOL048C FIG2P25653 1609 aa10.15□□□□□ -0.79
RRT8YOL048C FPK1P53739 893 aa10.14□□□□□ -0.79
RRT8YOL048C KEL3Q08979 651 aaPredicted RBP10.14□□□□□ -0.79
RRT8YOL048C LSP1Q12230 341 aaKnown RBP10.14□□□□□ -0.79
RRT8YOL048C FAS2P19097 1887 aaKnown RBP10.14□□□□□ -0.79
RRT8YOL048C FLO11P08640 1367 aa10.14□□□□□ -0.79
RRT8YOL048C SSA1P10591 642 aaKnown RBP10.13□□□□□ -0.79
RRT8YOL048C GAP1P19145 602 aaPredicted RBP10.13□□□□□ -0.79
RRT8YOL048C FBP26P32604 452 aa10.13□□□□□ -0.79
RRT8YOL048C DUR1,2P32528 1835 aaKnown RBP10.12□□□□□ -0.79
RRT8YOL048C ANP1P32629 500 aa10.12□□□□□ -0.79
RRT8YOL048C STV1P37296 890 aa10.12□□□□□ -0.79
RRT8YOL048C YHL050CP38721 697 aa10.12□□□□□ -0.79
RRT8YOL048C VID27P40157 782 aa10.12□□□□□ -0.79
RRT8YOL048C EPL1P43572 832 aa10.12□□□□□ -0.79
RRT8YOL048C PEX14P53112 341 aa10.12□□□□□ -0.79
RRT8YOL048C FET4P40988 552 aa10.11□□□□□ -0.79
RRT8YOL048C BUD6P41697 788 aa10.11□□□□□ -0.79
RRT8YOL048C PSK2Q08217 1101 aa10.11□□□□□ -0.79
RRT8YOL048C MATALPHA2P0CY08 210 aa10.1□□□□□ -0.79
RRT8YOL048C HMLALPHA2P0CY09 210 aa10.1□□□□□ -0.79
RRT8YOL048C PFK2P16862 959 aaKnown RBP RIP-Chip data10.1□□□□□ -0.79not detected
RRT8YOL048C HPR1P17629 752 aaKnown RBP10.1□□□□□ -0.79
RRT8YOL048C HCA4P20448 770 aaKnown RBP10.1□□□□□ -0.79
RRT8YOL048C RIT1P23796 513 aa10.1□□□□□ -0.79
RRT8YOL048C TTI1P36097 1038 aa10.1□□□□□ -0.79
RRT8YOL048C VPS8P39702 1274 aa10.1□□□□□ -0.79
RRT8YOL048C HDA1P53973 706 aa10.1□□□□□ -0.79
RRT8YOL048C RAD61Q99359 647 aa10.1□□□□□ -0.79
RRT8YOL048C THS1P04801 734 aaKnown RBP10.09□□□□□ -0.79
RRT8YOL048C GLC3P32775 704 aa10.09□□□□□ -0.79
RRT8YOL048C YHL017WP38745 532 aa10.09□□□□□ -0.79
RRT8YOL048C PTK2P47116 818 aaKnown RBP10.09□□□□□ -0.79
RRT8YOL048C TIM50Q02776 476 aa10.09□□□□□ -0.79
RRT8YOL048C TFC6Q06339 672 aa10.09□□□□□ -0.79
RRT8YOL048C PRX1P34227 261 aaKnown RBP10.08□□□□□ -0.8
RRT8YOL048C YBL028CP38202 106 aa10.08□□□□□ -0.8
RRT8YOL048C AKR1P39010 764 aa10.08□□□□□ -0.8
RRT8YOL048C MSH4P40965 878 aaPredicted RBP10.08□□□□□ -0.8
RRT8YOL048C COG8Q04632 607 aa10.08□□□□□ -0.8
RRT8YOL048C HRQ1Q05549 1077 aa10.08□□□□□ -0.8
RRT8YOL048C ELG1Q12050 791 aa10.08□□□□□ -0.8
RRT8YOL048C CPA2P03965 1118 aaKnown RBP10.07□□□□□ -0.8
RRT8YOL048C CBP1P07252 654 aa10.07□□□□□ -0.8
RRT8YOL048C ADP1P25371 1049 aa10.07□□□□□ -0.8
RRT8YOL048C PRO3P32263 286 aaKnown RBP10.07□□□□□ -0.8
RRT8YOL048C MYO3P36006 1272 aa10.07□□□□□ -0.8
RRT8YOL048C MTC3P53077 123 aa10.07□□□□□ -0.8
RRT8YOL048C YDL124WQ07551 312 aaKnown RBP10.07□□□□□ -0.8
RRT8YOL048C PCL8Q08966 492 aa10.07□□□□□ -0.8
RRT8YOL048C PMA1P05030 918 aaKnown RBP10.06□□□□□ -0.8
RRT8YOL048C ACE2P21192 770 aa10.06□□□□□ -0.8
RRT8YOL048C MSP1P28737 362 aa10.06□□□□□ -0.8
RRT8YOL048C RFC5P38251 354 aa10.06□□□□□ -0.8
RRT8YOL048C BDH2P39713 417 aa10.06□□□□□ -0.8
RRT8YOL048C ALG2P43636 503 aa10.06□□□□□ -0.8
RRT8YOL048C YJL171CP46992 396 aa10.06□□□□□ -0.8
RRT8YOL048C YGR117CP53270 476 aa10.06□□□□□ -0.8
RRT8YOL048C HST1P53685 503 aa10.06□□□□□ -0.8
RRT8YOL048C ECM23Q02710 187 aa10.06□□□□□ -0.8
RRT8YOL048C MPH3P0CE00 602 aa10.05□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 68.9 ms